Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu034769.2 Olea europaea HOM05D003868 ORTHO05D005364 6.0e-132 474.2 237 100.0
GSVIVG01031344001 Vitis vinifera HOM05D003868 ORTHO05D005364 3.1e-104 382.1 237 77.2
Prupe.6G302900 Prunus persica HOM05D003868 ORTHO05D005364 1.5e-103 379.8 237 79.7
CSS0027931 Camellia sinensis var. sinensis HOM05D003868 ORTHO05D005364 2.2e-102 375.9 237 77.6
Ciclev10028527m.g Citrus clementina HOM05D003868 ORTHO05D005364 6.0e-100 367.9 237 75.9
CSS0029807 Camellia sinensis var. sinensis HOM05D003868 ORTHO05D005364 1.8e-99 366.3 232 77.2
Atru.chr12.1514 Acer truncatum HOM05D003868 ORTHO05D005364 2.3e-99 365.9 237 75.5
Haze_15009 Corylus avellana HOM05D003868 ORTHO05D005364 1.5e-98 363.2 231 77.1
TPR.G34902 Trifolium pratense HOM05D003868 ORTHO05D005364 4.3e-98 361.7 237 73.8
TWI56G0733 Tripterygium wilfordii HOM05D003868 ORTHO05D005364 9.7e-98 360.5 237 76.4
FAN05G2124 Fragaria x ananassa HOM05D003868 ORTHO05D005364 2.8e-97 359.0 237 74.7
Manes.09G182200 Manihot esculenta HOM05D003868 ORTHO05D005364 4.8e-97 358.2 235 76.6
TAR633G1950 Trochodendron aralioides HOM05D003868 ORTHO05D005364 1.1e-96 357.1 237 73.8
Lj5g0001875 Lotus japonicus HOM05D003868 ORTHO05D005364 3.1e-96 355.5 215 80.0
Medtr1g085130 Medicago truncatula HOM05D003868 ORTHO05D005364 3.1e-96 355.5 237 73.8
Psat6g156480 Pisum sativum HOM05D003868 ORTHO05D005364 2.6e-95 352.4 237 72.6
Dinv30957 Davidia involucrata HOM05D003868 ORTHO05D005364 3.4e-95 352.1 229 76.4
VMungo0720G2099 Vigna mungo HOM05D003868 ORTHO05D005364 7.7e-95 350.9 223 74.9
arahy.Tifrunner.gnm1.ann1.936SG4 Arachis hypogaea HOM05D003868 ORTHO05D005364 1.7e-94 349.7 223 76.7
CsaV3_1G038240 Cucumis sativus L. HOM05D003868 ORTHO05D005364 3.2e-93 345.5 243 71.6
Glyma.10G141800 Glycine max HOM05D003868 ORTHO05D005364 3.2e-93 345.5 223 74.9
QL03p011251 Quercus lobata HOM05D003868 ORTHO05D005364 9.4e-93 344.0 208 79.8
AL6G38510 Arabidopsis lyrata HOM05D003868 ORTHO05D005364 3.6e-92 342.0 231 73.2
Cc02_g36030 Coffea canephora HOM05D003868 ORTHO05D005364 6.1e-92 341.3 208 78.4
THA.LOC104818763 Tarenaya hassleriana HOM05D003868 ORTHO05D005364 3.9e-91 338.6 231 71.9
A06p36880 Brassica napus HOM05D003868 ORTHO05D005364 6.7e-91 337.8 231 72.3
Aa31LG11G9990 Aethionema arabicum HOM05D003868 ORTHO05D005364 1.5e-90 336.7 201 79.6
TWI12G0833 Tripterygium wilfordii HOM05D003868 ORTHO05D005364 2.5e-90 335.9 184 87.5
C07p41620 Brassica napus HOM05D003868 ORTHO05D005364 3.3e-90 335.5 232 71.6
BolC7t44696H Brassica oleracea HOM05D003868 ORTHO05D005364 3.3e-90 335.5 232 71.6
CSS0017748 Camellia sinensis var. sinensis HOM05D003868 ORTHO05D005364 3.3e-90 335.5 181 90.1
Thecc.05G330900 Theobroma cacao HOM05D003868 ORTHO05D005364 9.7e-90 334.0 196 83.2
MD04G1184400 Malus domestica HOM05D003868 ORTHO05D005364 2.2e-89 332.8 181 88.4
CAN.G1248.3 Capsicum annuum HOM05D003868 ORTHO05D005364 2.8e-89 332.4 220 75.9
Manes.08G106600 Manihot esculenta HOM05D003868 ORTHO05D005364 4.8e-89 331.6 181 87.8
TAR362G1038 Trochodendron aralioides HOM05D003868 ORTHO05D005364 4.8e-89 331.6 181 87.3
Ca_10214_v3 Cicer arietinum L. HOM05D003868 ORTHO05D005364 6.3e-89 331.3 181 86.7
Sc07g0001850 Simmondsia chinensis HOM05D003868 ORTHO05D005364 8.2e-89 330.9 225 73.8
Nn4g25324 Nelumbo nucifera HOM05D003868 ORTHO05D005364 1.1e-88 330.5 182 87.9
RcHm_v2.0_Chr3g0458811 Rosa chinensis HOM05D003868 ORTHO05D005364 1.1e-88 330.5 181 89.0
DCAR_029304 Daucus carota HOM05D003868 ORTHO05D005364 1.4e-88 330.1 181 87.3
arahy.Tifrunner.gnm1.ann1.XTWP4U Arachis hypogaea HOM05D003868 ORTHO05D005364 1.8e-88 329.7 264 64.8
CiPaw.02G000700 Carya illinoinensis HOM05D003868 ORTHO05D005364 1.8e-88 329.7 181 86.7
SGA_v2.0_scaffold464G51994 Striga asiatica HOM05D003868 ORTHO05D005364 1.8e-88 329.7 185 88.6
MSTRG.20351 Avicennia marina HOM05D003868 ORTHO05D005364 2.4e-88 329.3 181 89.0
FAN02G3718 Fragaria x ananassa HOM05D003868 ORTHO05D005364 2.4e-88 329.3 181 87.8
Migut.K00044 Erythranthe guttata HOM05D003868 ORTHO05D005364 3.1e-88 328.9 181 89.0
FvH4_6g08670 Fragaria vesca HOM05D003868 ORTHO05D005364 3.1e-88 328.9 181 87.8
Sed0020210 Sechium edule HOM05D003868 ORTHO05D005364 3.1e-88 328.9 181 87.3
Duzib128G0320 Durio zibethinus HOM05D003868 ORTHO05D005364 9.1e-88 327.4 196 81.6
SalBow1G5269 Salvia bowleyana HOM05D003868 ORTHO05D005364 9.1e-88 327.4 181 89.5
SalBow1G5332 Salvia bowleyana HOM05D003868 ORTHO05D005364 9.1e-88 327.4 181 89.5
Potri.013G000700 Populus trichocarpa HOM05D003868 ORTHO05D005364 1.2e-87 327.0 182 86.8
FAN09G4770 Fragaria x ananassa HOM05D003868 ORTHO05D005364 1.5e-87 326.6 181 87.3
TAR629G1113 Trochodendron aralioides HOM05D003868 ORTHO05D005364 2.6e-87 325.9 181 86.2
HanXRQChr04g0116761 Helianthus annuus HOM05D003868 ORTHO05D005364 5.9e-87 324.7 182 85.2
Cpa.g.sc48.229 Carica papaya HOM05D003868 ORTHO05D005364 7.7e-87 324.3 195 80.0
Glyma.20G090300 Glycine max HOM05D003868 ORTHO05D005364 7.7e-87 324.3 181 84.5
Sabra13G0000600 Salix brachista HOM05D003868 ORTHO05D005364 7.7e-87 324.3 179 87.2
ECA236G4503 Erigeron canadensis HOM05D003868 ORTHO05D005364 1.3e-86 323.6 181 85.6
Eucgr.H01340 Eucalyptus grandis HOM05D003868 ORTHO05D005364 1.3e-86 323.6 190 82.6
MSTRG.5173 Avicennia marina HOM05D003868 ORTHO05D005364 1.7e-86 323.2 241 71.0
Rhsim05G0124800 Rhododendron simsii HOM05D003868 ORTHO05D005364 2.2e-86 322.8 179 87.7
Phvul.007G206500 Phaseolus vulgaris HOM05D003868 ORTHO05D005364 3.8e-86 322.0 182 83.5
Carub.0006s2428 Capsella rubella HOM05D003868 ORTHO05D005364 5.0e-86 321.6 180 84.4
AT5G26680 Arabidopsis thaliana HOM05D003868 ORTHO05D005364 6.5e-86 321.2 180 84.4
Gorai.011G205800 Gossypium raimondii HOM05D003868 ORTHO05D005364 6.5e-86 321.2 196 80.1
Gohir.D10G183600 Gossypium hirsutum HOM05D003868 ORTHO05D005364 8.5e-86 320.9 196 80.1
Gohir.D13G117100 Gossypium hirsutum HOM05D003868 ORTHO05D005364 8.5e-86 320.9 235 69.4
AUR62003554 Chenopodium quinoa HOM05D003868 ORTHO05D005364 1.1e-85 320.5 181 85.1
AUR62017868 Chenopodium quinoa HOM05D003868 ORTHO05D005364 1.1e-85 320.5 180 85.6
Os05g0540100 Oryza sativa ssp. japonica HOM05D003868 ORTHO05D005364 1.1e-85 320.5 181 87.8
Sp2g21320 Schrenkiella parvula HOM05D003868 ORTHO05D005364 1.1e-85 320.5 180 83.3
Aqoxy5G02863 Aquilegia oxysepala HOM05D003868 ORTHO05D005364 1.4e-85 320.1 181 85.1
Lsat_1_v5_gn_7_23500 Lactuca sativa HOM05D003868 ORTHO05D005364 1.4e-85 320.1 181 87.3
MELO3C015225.2 Cucumis melo HOM05D003868 ORTHO05D005364 1.9e-85 319.7 181 83.4
Gohir.A10G176900 Gossypium hirsutum HOM05D003868 ORTHO05D005364 1.9e-85 319.7 180 84.4
PGR031G0514 Punica granatum HOM05D003868 ORTHO05D005364 2.5e-85 319.3 181 84.5
BcaB04g19723 Brassica carinata HOM05D003868 ORTHO05D005364 3.2e-85 318.9 181 81.8
PSO357G0419 Papaver somniferum HOM05D003868 ORTHO05D005364 3.2e-85 318.9 180 83.9
BraA06t26613Z Brassica rapa HOM05D003868 ORTHO05D005364 5.5e-85 318.2 202 76.2
Gorai.013G131700 Gossypium raimondii HOM05D003868 ORTHO05D005364 7.2e-85 317.8 235 68.9
Thhalv10004386m.g Eutrema salsugineum HOM05D003868 ORTHO05D005364 1.6e-84 316.6 180 82.2
Zm00001eb294290 Zea mays HOM05D003868 ORTHO05D005364 1.6e-84 316.6 196 81.6
Lalb_Chr06g0167231 Lupinus albus HOM05D003868 ORTHO05D005364 2.1e-84 316.2 181 82.9
CARHR186910 Cardamine hirsuta HOM05D003868 ORTHO05D005364 2.7e-84 315.8 180 83.9
PSO170G4013 Papaver somniferum HOM05D003868 ORTHO05D005364 6.1e-84 314.7 180 82.8
Peaxi162Scf00194g00323 Petunia axillaris HOM05D003868 ORTHO05D005364 6.1e-84 314.7 181 85.1
Solyc01g102370.4 Solanum lycopersicum HOM05D003868 ORTHO05D005364 2.3e-83 312.8 181 84.5
Sopen01g044820 Solanum pennellii HOM05D003868 ORTHO05D005364 2.3e-83 312.8 181 84.5
PGR083G0274 Punica granatum HOM05D003868 ORTHO05D005364 3.9e-83 312.0 178 83.1
PGSC0003DMG400018278 Solanum tuberosum HOM05D003868 ORTHO05D005364 5.1e-83 311.6 181 84.0
MBI18_g03859_MAGBIO Magnolia biondii HOM05D003868 ORTHO05D005364 9.7e-82 307.4 181 81.8
Nitab4.5_0000541g0020 Nicotiana tabacum HOM05D003868 ORTHO05D005364 2.8e-81 305.8 181 83.4
SHI18007 Sapria himalayana HOM05D003868 ORTHO05D005364 3.7e-81 305.4 185 78.4
Nitab4.5_0003511g0030 Nicotiana tabacum HOM05D003868 ORTHO05D005364 8.2e-81 304.3 181 82.3
HPP92_017212 Vanilla planifolia HOM05D003868 ORTHO05D005364 1.8e-80 303.1 181 79.6
Eucgr.B01348 Eucalyptus grandis HOM05D003868 ORTHO05D005364 3.1e-80 302.4 179 81.6
CDE09G0142 Ceratophyllum demersum HOM05D003868 ORTHO05D005364 4.1e-80 302.0 178 83.7
SEGI_17973 Sequoiadendron giganteum HOM05D003868 ORTHO05D005364 7.0e-80 301.2 190 76.3
ATR0693G183 Amborella trichopoda HOM05D003868 ORTHO05D005364 4.5e-79 298.5 179 80.4
EL10Ac6g15321 Beta vulgaris HOM05D003868 ORTHO05D005364 5.0e-78 295.0 234 65.0
Lalb_Chr02g0147411 Lupinus albus HOM05D003868 ORTHO05D005364 1.9e-77 293.1 179 78.2
Aqoxy2G02412 Aquilegia oxysepala HOM05D003868 ORTHO05D005364 7.2e-77 291.2 237 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2826 Anthoceros agrestis HOM05D003868 ORTHO05D005364 6.1e-76 288.1 180 76.7
Migut.N00980 Erythranthe guttata HOM05D003868 ORTHO05D005364 3.0e-75 285.8 227 64.8
SalBow4G0333 Salvia bowleyana HOM05D003868 ORTHO05D005364 3.9e-75 285.4 226 64.6
ClCG03G017940 Citrullus lanatus HOM05D003868 ORTHO05D005364 5.2e-75 285.0 179 78.8
C02p59150 Brassica napus HOM05D003868 ORTHO05D005364 1.1e-74 283.9 219 66.7
COL.COLO4_28215 Corchorus olitorius HOM05D003868 ORTHO05D005364 2.0e-74 283.1 237 61.6
SMO201G0085 Selaginella moellendorffii HOM05D003868 ORTHO05D005364 4.4e-74 282.0 188 72.9
BcaC03g17876 Brassica carinata HOM05D003868 ORTHO05D005364 9.7e-74 280.8 202 68.8
CDE09G0492 Ceratophyllum demersum HOM05D003868 ORTHO05D005364 1.4e-72 276.9 149 89.3
Hund04404 Selenicereus undatus HOM05D003868 ORTHO05D005364 5.3e-72 275.0 181 77.3
PSO761G0576 Papaver somniferum HOM05D003868 ORTHO05D005364 9.1e-72 274.2 237 60.3
BolC2t11970H Brassica oleracea HOM05D003868 ORTHO05D005364 1.2e-71 273.9 198 69.7
Eucgr.B01834 Eucalyptus grandis HOM05D003868 ORTHO05D005364 1.7e-70 270.0 258 55.8
PSO210G0203 Papaver somniferum HOM05D003868 ORTHO05D005364 1.1e-69 267.3 238 59.7
Pp3c2_30860 Physcomitrium patens HOM05D003868 ORTHO05D005364 7.2e-69 264.6 180 72.2
Mapoly0083s0081 Marchantia polymorpha HOM05D003868 ORTHO05D005364 1.6e-68 263.5 180 72.2
Pp3c11_1310 Physcomitrium patens HOM05D003868 ORTHO05D005364 2.1e-68 263.1 196 65.8
Gohir.A13G114100 Gossypium hirsutum HOM05D003868 ORTHO05D005364 1.0e-67 260.8 235 59.1
Eucgr.B01328 Eucalyptus grandis HOM05D003868 ORTHO05D005364 2.3e-67 259.6 232 59.9
Lj5C315T22 Lonicera japonica HOM05D003868 ORTHO05D005364 5.2e-67 258.5 146 84.9
SGA_v2.0_scaffold5G02926 Striga asiatica HOM05D003868 ORTHO05D005364 8.8e-67 257.7 229 58.1
CBR_g39652 Chara braunii HOM05D003868 ORTHO05D005364 2.6e-66 256.1 170 71.8
Eucgr.B01329 Eucalyptus grandis HOM05D003868 ORTHO05D005364 2.2e-65 253.1 193 67.9
Zm00001eb211370 Zea mays HOM05D003868 ORTHO05D005364 4.2e-61 238.8 224 56.7
vmacro19799 Vaccinium macrocarpon HOM05D003868 ORTHO05D005364 7.2e-61 238.0 126 90.5
Eucgr.B01335 Eucalyptus grandis HOM05D003868 ORTHO05D005364 9.4e-61 237.7 145 78.6
Eucgr.B01331 Eucalyptus grandis HOM05D003868 ORTHO05D005364 1.2e-60 237.3 226 58.8
Os03g0834000 Oryza sativa ssp. japonica HOM05D003868 ORTHO05D005364 1.2e-60 237.3 198 63.1
Eucgr.B01344 Eucalyptus grandis HOM05D003868 ORTHO05D005364 4.7e-60 235.3 223 58.3
Eucgr.B01346 Eucalyptus grandis HOM05D003868 ORTHO05D005364 7.5e-58 228.0 172 69.2
Eucgr.B01342 Eucalyptus grandis HOM05D003868 ORTHO05D005364 1.3e-57 227.3 223 57.0
Eucgr.B01341 Eucalyptus grandis HOM05D003868 ORTHO05D005364 1.7e-54 216.9 231 54.1
A02p39430 Brassica napus HOM05D003868 ORTHO05D005364 1.1e-53 214.2 123 80.5
Eucgr.B01336 Eucalyptus grandis HOM05D003868 ORTHO05D005364 8.0e-52 208.0 181 61.9
Eucgr.B01835 Eucalyptus grandis HOM05D003868 ORTHO05D005364 1.8e-51 206.8 150 71.3
Cre03.g145687 Chlamydomonas reinhardtii HOM05D003868 ORTHO05D005364 6.8e-51 204.9 182 55.5
MCO07G337 Micromonas commoda HOM05D003868 ORTHO05D005364 4.4e-50 202.2 181 54.7
Eucgr.B01326 Eucalyptus grandis HOM05D003868 ORTHO05D005364 3.7e-49 199.1 164 65.9
Actinidia17731 Actinidia chinensis HOM05D003868 ORTHO05D005364 1.6e-47 193.7 105 88.6
HPP92_017311 Vanilla planifolia HOM05D003868 ORTHO05D005364 5.6e-45 185.3 213 49.3
PSO210G1262 Papaver somniferum HOM05D003868 ORTHO05D005364 1.5e-42 177.2 174 55.7
Eucgr.B01339 Eucalyptus grandis HOM05D003868 ORTHO05D005364 4.1e-40 169.1 126 72.2
PRCOL_00001649 Prasinoderma coloniale HOM05D003868 ORTHO05D005364 2.0e-39 166.8 196 48.0
Haze_27230 Corylus avellana HOM05D003868 ORTHO05D005364 2.7e-39 166.4 195 47.7
Atru.chr9.43 Acer truncatum HOM05D003868 ORTHO05D005364 2.0e-34 150.2 88 81.8
SEGI_09019 Sequoiadendron giganteum HOM05D003868 ORTHO05D005364 3.7e-33 146.0 103 69.9
CSS0040713 Camellia sinensis var. sinensis HOM05D003868 ORTHO05D005364 3.4e-26 122.9 61 93.4
Mapoly0013s0018 Marchantia polymorpha HOM05D003868 ORTHO05D005364 3.1e-19 99.8 72 61.1
TAR633G2595 Trochodendron aralioides HOM05D003868 ORTHO05D005364 1.9e-08 63.9 33 84.8
RcHm_v2.0_Chr7g0178771 Rosa chinensis HOM05D002606 ORTHO05D003016 7.9e-07 58.5 131 28.2
FvH4_5g17080 Fragaria vesca HOM05D002606 ORTHO05D003016 1.0e-06 58.2 131 28.2
Peaxi162Scf00683g00215 Petunia axillaris HOM05D002606 ORTHO05D003016 1.7e-06 57.4 143 26.6
QL10p027611 Quercus lobata HOM05D002606 ORTHO05D003016 3.0e-06 56.6 104 30.8
FAN04G2084 Fragaria x ananassa HOM05D002606 ORTHO05D003016 3.9e-06 56.2 131 28.2


User provided reference genes

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