Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu032522.1 Olea europaea HOM05D004484 ORTHO05D005370 1.1e-34 149.4 74 100.0
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 5.8e-17 90.5 63 71.4
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 1.9e-12 75.5 70 55.7
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 1.9e-12 75.5 70 57.1
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 2.5e-12 75.1 70 55.7
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 9.6e-12 73.2 70 54.3
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 2.8e-11 71.6 62 59.7
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 2.8e-11 71.6 70 55.7
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 2.8e-11 71.6 70 55.7
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 2.8e-11 71.6 70 54.3
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 3.7e-11 71.2 63 55.6
Solyc01g091430.2 Solanum lycopersicum HOM05D004484 ORTHO05D005370 8.1e-11 70.1 59 59.3
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 1.8e-10 68.9 59 55.9
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 2.4e-10 68.6 59 59.3
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 3.1e-10 68.2 47 70.2
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 5.3e-10 67.4 59 59.3
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 5.3e-10 67.4 63 55.6
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 9.0e-10 66.6 47 70.2
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 9.0e-10 66.6 71 49.3
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 1.2e-09 66.2 59 54.2
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 1.2e-09 66.2 63 54.0
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 1.2e-09 66.2 63 55.6
Eucgr.E01421 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.5e-09 65.9 62 53.2
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 1.5e-09 65.9 48 68.8
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 1.5e-09 65.9 59 52.5
QL08p052505 Quercus lobata HOM05D004484 ORTHO05D005370 1.5e-09 65.9 61 57.4
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 2.0e-09 65.5 64 51.6
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 2.0e-09 65.5 63 55.6
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 2.0e-09 65.5 63 55.6
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 2.0e-09 65.5 47 70.2
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 2.6e-09 65.1 59 55.9
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 2.6e-09 65.1 63 54.0
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 4.5e-09 64.3 63 52.4
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 5.8e-09 63.9 47 66.0
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 5.8e-09 63.9 62 48.4
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 1.0e-08 63.2 47 66.0
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 1.0e-08 63.2 47 66.0
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 1.3e-08 62.8 47 66.0
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 1.7e-08 62.4 68 48.5
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 1.7e-08 62.4 63 52.4
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 2.2e-08 62.0 47 61.7
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 2.2e-08 62.0 63 50.8
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 2.2e-08 62.0 47 66.0
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 2.9e-08 61.6 61 54.1
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 2.9e-08 61.6 63 55.6
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 3.8e-08 61.2 63 50.8
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 3.8e-08 61.2 63 52.4
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 3.8e-08 61.2 47 63.8
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 6.5e-08 60.5 47 63.8
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 6.5e-08 60.5 59 49.2
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 1.1e-07 59.7 47 63.8
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 1.4e-07 59.3 63 50.8
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 1.4e-07 59.3 47 59.6
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 1.9e-07 58.9 47 63.8
Eucgr.L02075 Eucalyptus grandis HOM05D004484 ORTHO05D005370 1.9e-07 58.9 62 48.4
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 2.5e-07 58.5 63 49.2
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.5e-07 58.5 63 49.2
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.5e-07 58.5 63 49.2
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.5e-07 58.5 63 49.2
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.5e-07 58.5 63 49.2
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 2.5e-07 58.5 63 49.2
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 2.5e-07 58.5 48 56.2
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 3.2e-07 58.2 47 61.7
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 4.2e-07 57.8 43 62.8
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 4.2e-07 57.8 47 57.4
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 5.5e-07 57.4 47 57.4
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 1.2e-06 56.2 47 55.3
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 1.2e-06 56.2 49 55.1
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 1.2e-06 56.2 47 55.3
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 1.2e-06 56.2 63 47.6
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 1.6e-06 55.8 64 48.4
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 1.6e-06 55.8 61 49.2
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 1.6e-06 55.8 47 57.4
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 1.6e-06 55.8 45 60.0
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 2.1e-06 55.5 47 55.3
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 2.1e-06 55.5 64 48.4
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 2.1e-06 55.5 64 48.4
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 2.1e-06 55.5 48 62.5
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 2.7e-06 55.1 47 55.3
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 3.5e-06 54.7 47 55.3
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 3.5e-06 54.7 64 46.9
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 3.5e-06 54.7 47 53.2
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 3.5e-06 54.7 63 47.6
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 4.6e-06 54.3 45 60.0
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 4.6e-06 54.3 45 55.6
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 4.6e-06 54.3 47 53.2
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 6.0e-06 53.9 47 53.2
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 6.0e-06 53.9 47 53.2
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 6.0e-06 53.9 64 39.1
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 6.0e-06 53.9 64 39.1
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 6.0e-06 53.9 47 55.3
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 7.9e-06 53.5 47 53.2
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 7.9e-06 53.5 47 59.6


User provided reference genes

Program Settings