Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu028617.1 Olea europaea HOM05D004330 ORTHO05D005182 6.1e-152 540.8 278 100.0
CSS0031487 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 2.3e-58 229.9 156 75.6
CANSAT01G1169 Cannabis sativa HOM05D004330 ORTHO05D005182 2.3e-58 229.9 156 76.3
MD08G1244900 Malus domestica HOM05D004330 ORTHO05D005182 2.3e-58 229.9 156 75.0
Prupe.1G566400 Prunus persica HOM05D004330 ORTHO05D005182 5.1e-58 228.8 170 70.0
Actinidia16901 Actinidia chinensis HOM05D004330 ORTHO05D005182 8.8e-58 228.0 156 75.0
CSS0001083 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 8.8e-58 228.0 156 75.0
MD15G1440000 Malus domestica HOM05D004330 ORTHO05D005182 8.8e-58 228.0 170 70.0
Nitab4.5_0000079g0120 Nicotiana tabacum HOM05D004330 ORTHO05D005182 1.5e-57 227.3 156 75.0
Nitab4.5_0007117g0020 Nicotiana tabacum HOM05D004330 ORTHO05D005182 1.5e-57 227.3 156 75.0
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 4.4e-57 225.7 156 73.1
Cfa008036 Carpinus fangiana HOM05D004330 ORTHO05D005182 5.7e-57 225.3 170 67.6
RcHm_v2.0_Chr6g0249411 Rosa chinensis HOM05D004330 ORTHO05D005182 5.7e-57 225.3 170 68.2
Migut.C00321 Erythranthe guttata HOM05D004330 ORTHO05D005182 7.4e-57 224.9 156 75.0
Lsat_1_v5_gn_6_109860 Lactuca sativa HOM05D004330 ORTHO05D005182 7.4e-57 224.9 170 66.5
Sc17g0000550 Simmondsia chinensis HOM05D004330 ORTHO05D005182 7.4e-57 224.9 170 67.6
Actinidia29358 Actinidia chinensis HOM05D004330 ORTHO05D005182 9.7e-57 224.6 156 74.4
Dinv22060 Davidia involucrata HOM05D004330 ORTHO05D005182 9.7e-57 224.6 156 73.7
Migut.G00904 Erythranthe guttata HOM05D004330 ORTHO05D005182 9.7e-57 224.6 156 75.0
FvH4_2g00140 Fragaria vesca HOM05D004330 ORTHO05D005182 9.7e-57 224.6 170 68.2
QL09p001201 Quercus lobata HOM05D004330 ORTHO05D005182 9.7e-57 224.6 156 74.4
MSTRG.22475 Avicennia marina HOM05D004330 ORTHO05D005182 1.3e-56 224.2 156 73.7
FAN24G1765 Fragaria x ananassa HOM05D004330 ORTHO05D005182 1.3e-56 224.2 170 67.6
SalBow6G7193 Salvia bowleyana HOM05D004330 ORTHO05D005182 1.3e-56 224.2 160 71.9
Haze_02242 Corylus avellana HOM05D004330 ORTHO05D005182 1.7e-56 223.8 189 62.4
CiPaw.04G008600 Carya illinoinensis HOM05D004330 ORTHO05D005182 3.7e-56 222.6 156 73.1
Peaxi162Scf00078g01141 Petunia axillaris HOM05D004330 ORTHO05D005182 3.7e-56 222.6 156 71.2
SalBow6G1408 Salvia bowleyana HOM05D004330 ORTHO05D005182 3.7e-56 222.6 160 71.2
CiPaw.03G012300 Carya illinoinensis HOM05D004330 ORTHO05D005182 4.8e-56 222.2 156 73.1
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea HOM05D004330 ORTHO05D005182 6.3e-56 221.9 156 72.4
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea HOM05D004330 ORTHO05D005182 6.3e-56 221.9 156 72.4
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea HOM05D004330 ORTHO05D005182 6.3e-56 221.9 156 72.4
Cc10_g16170 Coffea canephora HOM05D004330 ORTHO05D005182 6.3e-56 221.9 156 72.4
CSS0008451 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 8.2e-56 221.5 156 71.8
DCAR_024855 Daucus carota HOM05D004330 ORTHO05D005182 8.2e-56 221.5 156 71.8
FAN19G3045 Fragaria x ananassa HOM05D004330 ORTHO05D005182 8.2e-56 221.5 156 72.4
Nn6g32085 Nelumbo nucifera HOM05D004330 ORTHO05D005182 8.2e-56 221.5 156 71.8
Haze_02247 Corylus avellana HOM05D004330 ORTHO05D005182 1.1e-55 221.1 156 71.8
HanXRQChr05g0150611 Helianthus annuus HOM05D004330 ORTHO05D005182 1.1e-55 221.1 170 65.9
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla HOM05D004330 ORTHO05D005182 1.1e-55 221.1 156 73.1
vmacro06107 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 1.1e-55 221.1 156 72.4
vmacro23409 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 1.1e-55 221.1 156 72.4
GSVIVG01012102001 Vitis vinifera HOM05D004330 ORTHO05D005182 1.4e-55 220.7 156 71.8
CAN.G473.93 Capsicum annuum HOM05D004330 ORTHO05D005182 1.8e-55 220.3 156 72.4
Rhsim02G0174800 Rhododendron simsii HOM05D004330 ORTHO05D005182 1.8e-55 220.3 189 61.9
Phvul.006G106700 Phaseolus vulgaris HOM05D004330 ORTHO05D005182 2.4e-55 219.9 156 72.4
Sed0024292 Sechium edule HOM05D004330 ORTHO05D005182 3.1e-55 219.5 156 73.1
Cpa.g.sc249.10 Carica papaya HOM05D004330 ORTHO05D005182 4.1e-55 219.2 156 70.5
VMungo0540G0979 Vigna mungo HOM05D004330 ORTHO05D005182 5.3e-55 218.8 156 72.4
Rhsim01G0101300 Rhododendron simsii HOM05D004330 ORTHO05D005182 7.0e-55 218.4 156 71.8
CsaV3_2G033380 Cucumis sativus L. HOM05D004330 ORTHO05D005182 9.1e-55 218.0 156 72.4
ECA246G0284 Erigeron canadensis HOM05D004330 ORTHO05D005182 1.2e-54 217.6 170 64.1
Medtr1g079770 Medicago truncatula HOM05D004330 ORTHO05D005182 1.2e-54 217.6 156 72.4
TPR.G10262 Trifolium pratense HOM05D004330 ORTHO05D005182 1.2e-54 217.6 156 72.4
MELO3C008109.2 Cucumis melo HOM05D004330 ORTHO05D005182 1.5e-54 217.2 156 72.4
Glyma.03G252000 Glycine max HOM05D004330 ORTHO05D005182 1.5e-54 217.2 156 71.8
Solyc02g094090.4 Solanum lycopersicum HOM05D004330 ORTHO05D005182 1.5e-54 217.2 156 71.8
Lj5g0027584 Lotus japonicus HOM05D004330 ORTHO05D005182 2.0e-54 216.9 156 71.8
Oeu020638.1 Olea europaea HOM05D004330 ORTHO05D005182 2.0e-54 216.9 130 86.9
Potri.006G027100 Populus trichocarpa HOM05D004330 ORTHO05D005182 2.0e-54 216.9 156 71.2
THA.LOC104823378 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 2.0e-54 216.9 156 70.5
Thecc.08G188100 Theobroma cacao HOM05D004330 ORTHO05D005182 2.0e-54 216.9 156 69.9
SEGI_21093 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 2.6e-54 216.5 157 69.4
THA.LOC104803377 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 2.6e-54 216.5 156 69.9
Aqoxy5G00868 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 3.5e-54 216.1 156 69.9
Sabra06G0020300 Salix brachista HOM05D004330 ORTHO05D005182 3.5e-54 216.1 156 70.5
Sopen02g038710 Solanum pennellii HOM05D004330 ORTHO05D005182 3.5e-54 216.1 156 71.2
unitig_37.g12692 Utricularia gibba HOM05D004330 ORTHO05D005182 3.5e-54 216.1 156 69.2
Ciclev10019077m.g Citrus clementina HOM05D004330 ORTHO05D005182 4.5e-54 215.7 156 69.9
Glyma.19G249400 Glycine max HOM05D004330 ORTHO05D005182 4.5e-54 215.7 156 71.2
ClCG11G008260 Citrullus lanatus HOM05D004330 ORTHO05D005182 5.9e-54 215.3 155 71.6
TWI12G0377 Tripterygium wilfordii HOM05D004330 ORTHO05D005182 5.9e-54 215.3 156 69.9
MBI16_g41537_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 7.7e-54 214.9 156 70.5
AUR62011839 Chenopodium quinoa HOM05D004330 ORTHO05D005182 1.0e-53 214.5 170 64.7
AUR62024682 Chenopodium quinoa HOM05D004330 ORTHO05D005182 1.0e-53 214.5 170 64.7
Eucgr.C04264 Eucalyptus grandis HOM05D004330 ORTHO05D005182 1.0e-53 214.5 170 64.1
Manes.15G103100 Manihot esculenta HOM05D004330 ORTHO05D005182 1.0e-53 214.5 156 69.9
PSO210G1668 Papaver somniferum HOM05D004330 ORTHO05D005182 1.0e-53 214.5 156 70.5
PSO761G0081 Papaver somniferum HOM05D004330 ORTHO05D005182 1.0e-53 214.5 156 70.5
Psat6g142240 Pisum sativum HOM05D004330 ORTHO05D005182 1.0e-53 214.5 156 71.8
CDE03G0141 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 1.3e-53 214.2 156 68.6
Thhalv10018205m.g Eutrema salsugineum HOM05D004330 ORTHO05D005182 1.3e-53 214.2 156 69.2
Os03g0417900 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 1.3e-53 214.2 156 66.7
Ca_09987_v3 Cicer arietinum L. HOM05D004330 ORTHO05D005182 1.7e-53 213.8 156 71.2
Ah.11g049400 Amaranthus hybridus HOM05D004330 ORTHO05D005182 2.2e-53 213.4 170 64.1
Lalb_Chr04g0261991 Lupinus albus HOM05D004330 ORTHO05D005182 2.9e-53 213.0 156 71.8
Hund19537 Selenicereus undatus HOM05D004330 ORTHO05D005182 2.9e-53 213.0 170 63.5
BcaB03g14885 Brassica carinata HOM05D004330 ORTHO05D005182 5.0e-53 212.2 156 68.6
PGR031G1280 Punica granatum HOM05D004330 ORTHO05D005182 5.0e-53 212.2 156 69.2
AL2G30885 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 6.5e-53 211.8 156 67.9
BraA07t31323Z Brassica rapa HOM05D004330 ORTHO05D005182 6.5e-53 211.8 156 68.6
Carub.0002s1815 Capsella rubella HOM05D004330 ORTHO05D005182 6.5e-53 211.8 156 69.2
AT1G71270 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 8.5e-53 211.5 156 67.9
EL10As5g23498 Beta vulgaris HOM05D004330 ORTHO05D005182 8.5e-53 211.5 170 64.1
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis HOM05D004330 ORTHO05D005182 1.4e-52 210.7 170 61.8
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis HOM05D004330 ORTHO05D005182 1.4e-52 210.7 170 61.8
BcaC08g46563 Brassica carinata HOM05D004330 ORTHO05D005182 1.4e-52 210.7 156 67.9
A07p37610 Brassica napus HOM05D004330 ORTHO05D005182 1.4e-52 210.7 156 67.9
C06p45370 Brassica napus HOM05D004330 ORTHO05D005182 1.4e-52 210.7 156 67.9
BolC6t39595H Brassica oleracea HOM05D004330 ORTHO05D005182 1.4e-52 210.7 156 67.9
Sp5g26470 Schrenkiella parvula HOM05D004330 ORTHO05D005182 1.9e-52 210.3 156 67.3
AL2G30900 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 2.5e-52 209.9 156 67.3
Carub.0002s1817 Capsella rubella HOM05D004330 ORTHO05D005182 5.5e-52 208.8 156 67.3
Gohir.A05G251400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 7.2e-52 208.4 156 67.3
Gohir.D05G252400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 7.2e-52 208.4 156 67.3
Gorai.009G264800 Gossypium raimondii HOM05D004330 ORTHO05D005182 7.2e-52 208.4 156 67.3
ATR0580G447 Amborella trichopoda HOM05D004330 ORTHO05D005182 9.4e-52 208.0 156 67.9
AT1G71300 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 1.2e-51 207.6 155 65.8
SGA_v2.0_scaffold227G43197 Striga asiatica HOM05D004330 ORTHO05D005182 2.1e-51 206.8 134 78.4
Zm00001eb393130 Zea mays HOM05D004330 ORTHO05D005182 2.1e-51 206.8 156 66.0
Aqoxy2G00735 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 8.0e-51 204.9 170 61.8
HPP92_006237 Vanilla planifolia HOM05D004330 ORTHO05D005182 8.0e-51 204.9 156 66.0
HPP92_006305 Vanilla planifolia HOM05D004330 ORTHO05D005182 1.4e-50 204.1 170 61.8
Lj7C415G17 Lonicera japonica HOM05D004330 ORTHO05D005182 2.3e-50 203.4 130 80.8
Nitab4.5_0007150g0080 Nicotiana tabacum HOM05D004330 ORTHO05D005182 5.2e-50 202.2 139 74.8
COL.COLO4_37491 Corchorus olitorius HOM05D004330 ORTHO05D005182 1.5e-49 200.7 164 65.2
Nitab4.5_0002887g0010 Nicotiana tabacum HOM05D004330 ORTHO05D005182 2.0e-49 200.3 139 74.1
SMO304G0018 Selaginella moellendorffii HOM05D004330 ORTHO05D005182 7.4e-49 198.4 156 64.1
Duzib177G1138 Durio zibethinus HOM05D004330 ORTHO05D005182 3.7e-48 196.1 136 69.1
Mapoly0091s0001 Marchantia polymorpha HOM05D004330 ORTHO05D005182 1.8e-47 193.7 157 63.1
Aa31LG4G9240 Aethionema arabicum HOM05D004330 ORTHO05D005182 5.3e-47 192.2 207 54.1
Pp3c4_27380 Physcomitrium patens HOM05D004330 ORTHO05D005182 2.6e-46 189.9 170 57.6
SalBow1G7663 Salvia bowleyana HOM05D001091 ORTHO05D001020 7.7e-46 188.3 134 71.6
SHI24508 Sapria himalayana HOM05D004330 ORTHO05D005182 1.0e-42 177.9 136 67.6
CBR_g54936 Chara braunii HOM05D000019 ORTHO05D000353 1.5e-41 174.1 147 54.4
COL.COLO4_00397 Corchorus olitorius HOM05D004330 ORTHO05D005182 7.0e-39 165.2 117 70.1
Os10g0488300 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 2.5e-36 156.8 155 52.3
Zm00001eb045280 Zea mays HOM05D004330 ORTHO05D005182 9.8e-33 144.8 156 48.1
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 4.8e-32 142.5 95 82.1
Oeu058856.1 Olea europaea HOM05D024142 ORTHO05D005182 5.4e-31 139.0 85 85.9
Oeu019037.1 Olea europaea HOM05D024142 ORTHO05D005182 1.6e-30 137.5 85 85.9
Atru.chr13.2589 Acer truncatum HOM05D004330 ORTHO05D005182 5.5e-28 129.0 85 69.4
MCO11G104 Micromonas commoda HOM05D004330 ORTHO05D005182 2.2e-24 117.1 141 45.4
MBI16_g23303_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 2.5e-20 103.6 68 70.6
EL10Ac2g03252 Beta vulgaris HOM05D004330 ORTHO05D005182 5.2e-18 95.9 69 65.2
MBI13_g40628_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.9e-15 87.4 64 62.5
Cre08.g367200 Chlamydomonas reinhardtii HOM05D004330 ORTHO05D005182 4.6e-14 82.8 140 32.1
Oeu051633.1 Olea europaea HOM05D024142 ORTHO05D292675 3.0e-13 80.1 86 54.7
HPP92_006372 Vanilla planifolia HOM05D004330 ORTHO05D005182 3.0e-13 80.1 77 58.4
Oeu054836.1 Olea europaea HOM05D024142 ORTHO05D290771 6.6e-13 79.0 82 59.8
MBI13_g40627_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 1.1e-10 71.6 63 61.9
SGA_v2.0_scaffold123G33447 Striga asiatica HOM05D004330 ORTHO05D005182 3.1e-10 70.1 43 72.1
PRCOL_00005416 Prasinoderma coloniale HOM05D004330 ORTHO05D005182 3.2e-07 60.1 131 32.1


User provided reference genes

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