Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu023268.1 Olea europaea HOM05D006734 ORTHO05D008580 2.8e-48 194.9 96 100.0
GSVIVG01032383001 Vitis vinifera HOM05D006734 ORTHO05D008580 8.0e-43 176.8 96 86.5
SGA_v2.0_scaffold18G08271 Striga asiatica HOM05D006734 ORTHO05D008580 1.0e-42 176.4 96 90.6
MELO3C021593.2 Cucumis melo HOM05D006734 ORTHO05D008580 2.3e-42 175.3 96 87.5
Gohir.D04G058500 Gossypium hirsutum HOM05D006734 ORTHO05D008580 3.0e-42 174.9 96 86.5
Gorai.012G065200 Gossypium raimondii HOM05D006734 ORTHO05D008580 3.0e-42 174.9 96 86.5
Potri.001G343100 Populus trichocarpa HOM05D006734 ORTHO05D008580 3.0e-42 174.9 96 87.5
Haze_14760 Corylus avellana HOM05D006734 ORTHO05D008580 4.0e-42 174.5 96 86.5
Ciclev10014883m.g Citrus clementina HOM05D006734 ORTHO05D008580 5.2e-42 174.1 96 86.5
Glyma.05G002300 Glycine max HOM05D006734 ORTHO05D008580 5.2e-42 174.1 96 87.5
CiPaw.04G029800 Carya illinoinensis HOM05D006734 ORTHO05D008580 6.8e-42 173.7 96 86.5
Migut.H00068 Erythranthe guttata HOM05D006734 ORTHO05D008580 6.8e-42 173.7 96 88.5
Cpa.g.sc108.78 Carica papaya HOM05D006734 ORTHO05D008580 1.2e-41 172.9 96 86.5
Gohir.A05G354600 Gossypium hirsutum HOM05D006734 ORTHO05D008580 1.2e-41 172.9 96 85.4
MSTRG.3137 Avicennia marina HOM05D006734 ORTHO05D008580 1.5e-41 172.6 96 87.5
QL02p073991 Quercus lobata HOM05D006734 ORTHO05D008580 2.0e-41 172.2 95 85.3
COL.COLO4_29173 Corchorus olitorius HOM05D006734 ORTHO05D008580 2.6e-41 171.8 96 85.4
Lj2g0015195 Lotus japonicus HOM05D006734 ORTHO05D008580 2.6e-41 171.8 96 86.5
Solyc02g093460.4 Solanum lycopersicum HOM05D006734 ORTHO05D008580 2.6e-41 171.8 96 85.4
CANSAT64G2114 Cannabis sativa HOM05D006734 ORTHO05D008580 3.4e-41 171.4 96 85.4
ClCG09G019390 Citrullus lanatus HOM05D006734 ORTHO05D008580 3.4e-41 171.4 96 85.4
Manes.17G111000 Manihot esculenta HOM05D006734 ORTHO05D008580 3.4e-41 171.4 96 84.4
Sopen02g038210 Solanum pennellii HOM05D006734 ORTHO05D008580 3.4e-41 171.4 96 85.4
PGSC0003DMG400012609 Solanum tuberosum HOM05D006734 ORTHO05D008580 3.4e-41 171.4 96 85.4
PGR083G0596 Punica granatum HOM05D006734 ORTHO05D008580 4.4e-41 171.0 96 85.4
Nn3g16685 Nelumbo nucifera HOM05D006734 ORTHO05D008580 7.5e-41 170.2 96 84.4
CsaV3_5G027020 Cucumis sativus L. HOM05D006734 ORTHO05D008580 9.8e-41 169.9 96 84.4
Psat1g053400 Pisum sativum HOM05D006734 ORTHO05D008580 9.8e-41 169.9 96 85.4
Aqoxy3G01241 Aquilegia oxysepala HOM05D006734 ORTHO05D008580 1.3e-40 169.5 96 83.3
Cc07_g00010 Coffea canephora HOM05D006734 ORTHO05D008580 1.3e-40 169.5 96 85.4
Prupe.3G294000 Prunus persica HOM05D006734 ORTHO05D008580 1.3e-40 169.5 96 85.4
Lalb_Chr02g0160561 Lupinus albus HOM05D006734 ORTHO05D008580 2.2e-40 168.7 94 85.1
Medtr6g004400 Medicago truncatula HOM05D006734 ORTHO05D008580 2.2e-40 168.7 96 84.4
FvH4_6g51780 Fragaria vesca HOM05D006734 ORTHO05D008580 2.8e-40 168.3 96 83.3
FAN14G0563 Fragaria x ananassa HOM05D006734 ORTHO05D008580 2.8e-40 168.3 96 83.3
MD17G1022100 Malus domestica HOM05D006734 ORTHO05D008580 2.8e-40 168.3 96 84.4
RcHm_v2.0_Chr2g0173311 Rosa chinensis HOM05D006734 ORTHO05D008580 2.8e-40 168.3 96 83.3
Rhsim10G0014500 Rhododendron simsii HOM05D006734 ORTHO05D008580 4.9e-40 167.5 96 83.3
Actinidia36125 Actinidia chinensis HOM05D006734 ORTHO05D008580 6.3e-40 167.2 96 83.3
FAN02G4451 Fragaria x ananassa HOM05D006734 ORTHO05D008580 6.3e-40 167.2 96 82.3
Phvul.004G004100 Phaseolus vulgaris HOM05D006734 ORTHO05D008580 8.3e-40 166.8 96 84.4
CAN.G473.21 Capsicum annuum HOM05D006734 ORTHO05D008580 1.1e-39 166.4 96 83.3
Ca_04141_v3 Cicer arietinum L. HOM05D006734 ORTHO05D008580 1.1e-39 166.4 96 83.3
Thecc.04G019600 Theobroma cacao HOM05D006734 ORTHO05D008580 1.1e-39 166.4 93 84.9
TAR622G1243 Trochodendron aralioides HOM05D006734 ORTHO05D008580 1.1e-39 166.4 96 81.2
arahy.Tifrunner.gnm1.ann1.7L5D5L Arachis hypogaea HOM05D006734 ORTHO05D008580 1.4e-39 166.0 96 81.2
arahy.Tifrunner.gnm1.ann1.K7325H Arachis hypogaea HOM05D006734 ORTHO05D008580 1.4e-39 166.0 96 81.2
vmacro05878 Vaccinium macrocarpon HOM05D006734 ORTHO05D008580 1.4e-39 166.0 96 83.3
Aa31LG11G15240 Aethionema arabicum HOM05D006734 ORTHO05D008580 1.8e-39 165.6 96 82.3
Ah.03g137010 Amaranthus hybridus HOM05D006734 ORTHO05D008580 1.8e-39 165.6 96 83.3
TWI36G0664 Tripterygium wilfordii HOM05D006734 ORTHO05D008580 3.2e-39 164.9 96 82.3
HanXRQChr09g0255301 Helianthus annuus HOM05D006734 ORTHO05D008580 5.4e-39 164.1 96 82.3
Eucgr.J02259 Eucalyptus grandis HOM05D006734 ORTHO05D008580 7.0e-39 163.7 96 79.2
FAN05G5484 Fragaria x ananassa HOM05D006734 ORTHO05D008580 7.0e-39 163.7 96 80.2
HPP92_004604 Vanilla planifolia HOM05D006734 ORTHO05D008580 7.0e-39 163.7 96 80.2
AL6G25190 Arabidopsis lyrata HOM05D006734 ORTHO05D008580 9.2e-39 163.3 96 81.2
AT5G14460 Arabidopsis thaliana HOM05D006734 ORTHO05D008580 9.2e-39 163.3 96 81.2
Carub.0006s1264 Capsella rubella HOM05D006734 ORTHO05D008580 9.2e-39 163.3 96 81.2
CARHR198850 Cardamine hirsuta HOM05D006734 ORTHO05D008580 9.2e-39 163.3 96 81.2
ECA232G1420 Erigeron canadensis HOM05D006734 ORTHO05D008580 9.2e-39 163.3 96 81.2
AUR62028415 Chenopodium quinoa HOM05D006734 ORTHO05D008580 1.2e-38 162.9 96 82.3
BcaB08g36983 Brassica carinata HOM05D006734 ORTHO05D008580 1.6e-38 162.5 96 80.2
BcaC04g19033 Brassica carinata HOM05D006734 ORTHO05D008580 1.6e-38 162.5 96 80.2
C09p62720 Brassica napus HOM05D006734 ORTHO05D008580 1.6e-38 162.5 96 80.2
BolC9t59109H Brassica oleracea HOM05D006734 ORTHO05D008580 1.6e-38 162.5 96 80.2
BraA10t44473Z Brassica rapa HOM05D006734 ORTHO05D008580 1.6e-38 162.5 96 80.2
Thhalv10013219m.g Eutrema salsugineum HOM05D006734 ORTHO05D008580 1.6e-38 162.5 96 79.2
MBI15_g36475_MAGBIO Magnolia biondii HOM05D006734 ORTHO05D008580 2.0e-38 162.2 96 80.2
Sp6g29560 Schrenkiella parvula HOM05D006734 ORTHO05D008580 2.0e-38 162.2 96 80.2
Hund24869 Selenicereus undatus HOM05D006734 ORTHO05D008580 2.0e-38 162.2 96 80.2
PSO017G5381 Papaver somniferum HOM05D006734 ORTHO05D008580 2.7e-38 161.8 96 77.1
Zm00001eb267110 Zea mays HOM05D006734 ORTHO05D008580 3.5e-38 161.4 96 79.2
AUR62041944 Chenopodium quinoa HOM05D006734 ORTHO05D008580 4.5e-38 161.0 96 79.2
Lsat_1_v5_gn_4_184340 Lactuca sativa HOM05D006734 ORTHO05D008580 4.5e-38 161.0 96 80.2
Cfa007337 Carpinus fangiana HOM05D006734 ORTHO05D008580 2.3e-37 158.7 87 86.2
CDE09G1408 Ceratophyllum demersum HOM05D006734 ORTHO05D008580 2.3e-37 158.7 96 78.1
ATR0824G040 Amborella trichopoda HOM05D006734 ORTHO05D008580 2.9e-37 158.3 96 77.1
EL10Ac6g14101 Beta vulgaris HOM05D006734 ORTHO05D008580 3.9e-37 157.9 96 80.2
DCAR_011261 Daucus carota HOM05D006734 ORTHO05D008580 8.6e-37 156.8 96 78.1
Os05g0108000 Oryza sativa ssp. japonica HOM05D006734 ORTHO05D008580 1.9e-36 155.6 96 77.1
VMungo0464G0440 Vigna mungo HOM05D006734 ORTHO05D008580 1.0e-34 149.8 96 79.2
Lj7A601T102 Lonicera japonica HOM05D006734 ORTHO05D008580 2.2e-32 142.1 73 94.5
Sabra16G0222500 Salix brachista HOM05D006734 ORTHO05D008580 7.0e-31 137.1 73 87.7
Nitab4.5_0001562g0130 Nicotiana tabacum HOM05D006734 ORTHO05D008580 1.2e-30 136.3 72 91.7
FAN09G4334 Fragaria x ananassa HOM05D006734 ORTHO05D008580 1.6e-30 136.0 73 87.7
BcaB08g36998 Brassica carinata HOM05D006734 ORTHO05D008580 2.7e-30 135.2 97 71.1
Sc07g0007780 Simmondsia chinensis HOM05D006734 ORTHO05D008580 1.0e-29 133.3 73 86.3
unitig_748.g6980 Utricularia gibba HOM05D006734 ORTHO05D008580 1.5e-28 129.4 76 82.9
SEGI_35368 Sequoiadendron giganteum HOM05D006734 ORTHO05D008580 1.6e-27 125.9 72 76.4
SMO367G0030 Selaginella moellendorffii HOM05D006734 ORTHO05D008580 4.4e-25 117.9 86 64.0
Nitab4.5_0006683g0080 Nicotiana tabacum HOM05D006734 ORTHO05D008580 1.1e-23 113.2 59 91.5
Peaxi162Scf01972g00023 Petunia axillaris HOM05D006734 ORTHO05D008580 1.9e-23 112.5 75 76.0
Peaxi162Scf03028g00013 Petunia axillaris HOM05D006734 ORTHO05D008580 1.2e-22 109.8 59 86.4
AagrBONN_evm.TU.Sc2ySwM_228.5808 Anthoceros agrestis HOM05D006734 ORTHO05D008580 4.6e-22 107.8 96 53.1
Mapoly0093s0080 Marchantia polymorpha HOM05D006734 ORTHO05D008580 1.0e-21 106.7 89 53.9
Pp3c2_21370 Physcomitrium patens HOM05D006734 ORTHO05D008580 1.7e-21 105.9 87 55.2
PSO819G0001 Papaver somniferum HOM05D006734 ORTHO05D008580 2.3e-21 105.5 59 78.0
CBR_g50116 Chara braunii HOM05D006734 ORTHO05D008580 6.6e-21 104.0 92 48.9
SHI03823 Sapria himalayana HOM05D006734 ORTHO05D008580 1.9e-20 102.4 63 77.8
Cre16.g690250 Chlamydomonas reinhardtii HOM05D006734 ORTHO05D008580 2.0e-17 92.4 86 52.3
MCO16G576 Micromonas commoda HOM05D006734 ORTHO05D008580 7.6e-17 90.5 89 50.6
SalBow1G2810 Salvia bowleyana HOM05D006734 ORTHO05D008580 6.4e-08 60.8 32 90.6
Dinv25724 Davidia involucrata HOM05D006734 ORTHO05D008580 1.4e-07 59.7 36 75.0
Atru.chr6.2432 Acer truncatum HOM05D006734 ORTHO05D008580 2.4e-07 58.9 32 84.4
Sed0017476 Sechium edule HOM05D006734 ORTHO05D008580 2.4e-07 58.9 32 84.4
Peaxi162Scf00129g01651 Petunia axillaris HOM05D006734 ORTHO05D008580 7.1e-07 57.4 32 81.2
CSS0015351 Camellia sinensis var. sinensis HOM05D006734 ORTHO05D008580 1.2e-06 56.6 32 81.2


User provided reference genes

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