Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022371.1 Olea europaea HOM05D001261 ORTHO05D001130 4.5e-124 448.0 230 100.0
Oeu034575.1 Olea europaea HOM05D001261 ORTHO05D001130 1.5e-34 150.6 256 39.8
Oeu034576.1 Olea europaea HOM05D001261 ORTHO05D001130 2.8e-33 146.4 222 43.2
Haze_11610 Corylus avellana HOM05D001261 ORTHO05D001130 9.0e-16 88.2 159 37.1
Cfa014913 Carpinus fangiana HOM05D001261 ORTHO05D001130 1.2e-15 87.8 138 40.6
COL.COLO4_09888 Corchorus olitorius HOM05D001261 ORTHO05D001130 3.4e-15 86.3 232 31.9
Gohir.D10G141600 Gossypium hirsutum HOM05D001261 ORTHO05D001130 9.9e-15 84.7 176 37.5
Gorai.011G157600 Gossypium raimondii HOM05D001261 ORTHO05D001130 9.9e-15 84.7 176 37.5
Duzib212G0740 Durio zibethinus HOM05D001261 ORTHO05D001130 2.2e-14 83.6 212 33.5
Gohir.A10G124901 Gossypium hirsutum HOM05D001261 ORTHO05D001130 3.8e-14 82.8 176 37.5
Manes.03G147600 Manihot esculenta HOM05D001261 ORTHO05D001130 4.9e-14 82.4 177 33.9
DCAR_026613 Daucus carota HOM05D001261 ORTHO05D001130 6.4e-14 82.0 160 34.4
Cpa.g.sc1068.1 Carica papaya HOM05D001261 ORTHO05D001130 8.4e-14 81.6 171 35.7
GSVIVG01021061001 Vitis vinifera HOM05D001261 ORTHO05D001130 8.4e-14 81.6 162 35.2
TWI09G0965 Tripterygium wilfordii HOM05D001261 ORTHO05D001130 1.1e-13 81.3 183 35.0
TWI09G1575 Tripterygium wilfordii HOM05D001261 ORTHO05D001130 1.1e-13 81.3 183 35.0
VMungo0720G0565 Vigna mungo HOM05D001261 ORTHO05D001130 1.9e-13 80.5 171 36.3
SalBow8G0560 Salvia bowleyana HOM05D001261 ORTHO05D001130 2.4e-13 80.1 211 34.1
TWI73G1259 Tripterygium wilfordii HOM05D001261 ORTHO05D001130 2.4e-13 80.1 183 35.5
Atru.chr4.1702 Acer truncatum HOM05D001261 ORTHO05D001130 3.2e-13 79.7 216 31.0
Potri.017G055200 Populus trichocarpa HOM05D001261 ORTHO05D001130 3.2e-13 79.7 200 31.5
Manes.15G053800 Manihot esculenta HOM05D001261 ORTHO05D001130 4.2e-13 79.3 171 33.9
ClCG06G007770 Citrullus lanatus HOM05D001261 ORTHO05D001130 5.4e-13 79.0 163 35.6
Thecc.04G203600 Theobroma cacao HOM05D001261 ORTHO05D001130 5.4e-13 79.0 212 30.7
Dinv38233 Davidia involucrata HOM05D001261 ORTHO05D001130 7.1e-13 78.6 212 28.8
QL06p024828 Quercus lobata HOM05D001261 ORTHO05D001130 9.3e-13 78.2 179 33.0
Ciclev10005091m.g Citrus clementina HOM05D001261 ORTHO05D001130 1.2e-12 77.8 223 30.9
RcHm_v2.0_Chr4g0415261 Rosa chinensis HOM05D001261 ORTHO05D001130 2.7e-12 76.6 181 34.3
arahy.Tifrunner.gnm1.ann1.K5DIHH Arachis hypogaea HOM05D001261 ORTHO05D001130 3.5e-12 76.3 142 40.1
Carub.0001s0412 Capsella rubella HOM05D001261 ORTHO05D001130 4.6e-12 75.9 158 34.8
arahy.Tifrunner.gnm1.ann1.J9QP8S Arachis hypogaea HOM05D001261 ORTHO05D001130 6.0e-12 75.5 142 39.4
MD04G1008800 Malus domestica HOM05D001261 ORTHO05D001130 6.0e-12 75.5 184 34.2
Gorai.005G130200 Gossypium raimondii HOM05D001261 ORTHO05D001130 7.9e-12 75.1 163 34.4
Lalb_Chr02g0144151 Lupinus albus HOM05D001261 ORTHO05D001130 7.9e-12 75.1 150 38.7
Prupe.1G008100 Prunus persica HOM05D001261 ORTHO05D001130 7.9e-12 75.1 177 32.8
MELO3C020449.2 Cucumis melo HOM05D001261 ORTHO05D001130 1.0e-11 74.7 169 34.3
CsaV3_2G011520 Cucumis sativus L. HOM05D001261 ORTHO05D001130 1.0e-11 74.7 169 34.3
Gohir.D02G123900 Gossypium hirsutum HOM05D001261 ORTHO05D001130 1.0e-11 74.7 163 34.4
AUR62020824 Chenopodium quinoa HOM05D001261 ORTHO05D001130 1.3e-11 74.3 202 30.2
Gohir.A03G094500 Gossypium hirsutum HOM05D001261 ORTHO05D001130 1.8e-11 73.9 213 31.0
Hma1.2p1_0383F.1_g140260 Hydrangea macrophylla HOM05D001261 ORTHO05D001130 2.3e-11 73.6 166 33.7
Sabra17G0046800 Salix brachista HOM05D001261 ORTHO05D001130 2.3e-11 73.6 149 34.9
Migut.G00695 Erythranthe guttata HOM05D001261 ORTHO05D001130 3.0e-11 73.2 217 34.1
Rhsim09G0056200 Rhododendron simsii HOM05D001261 ORTHO05D001130 3.0e-11 73.2 210 30.0
Potri.001G315200 Populus trichocarpa HOM05D001261 ORTHO05D001130 5.1e-11 72.4 185 31.9
CiPaw.02G066300 Carya illinoinensis HOM05D001261 ORTHO05D001130 6.7e-11 72.0 115 41.7
Sabra17G0049000 Salix brachista HOM05D001261 ORTHO05D001130 6.7e-11 72.0 149 34.2
Dinv27237 Davidia involucrata HOM05D001261 ORTHO05D001130 8.7e-11 71.6 220 30.0
Sed0026703 Sechium edule HOM05D001261 ORTHO05D001130 1.1e-10 71.2 133 35.3
Solyc09g091960.3 Solanum lycopersicum HOM05D001261 ORTHO05D001130 1.1e-10 71.2 132 35.6
Cc03_g07860 Coffea canephora HOM05D001261 ORTHO05D001130 3.3e-10 69.7 161 37.3
Sopen09g034860 Solanum pennellii HOM05D001261 ORTHO05D001130 3.3e-10 69.7 134 36.6
CSS0043696 Camellia sinensis var. sinensis HOM05D001261 ORTHO05D001130 9.6e-10 68.2 172 30.8
CSS0047336 Camellia sinensis var. sinensis HOM05D001261 ORTHO05D001130 9.6e-10 68.2 172 30.8
CiPaw.01G121000 Carya illinoinensis HOM05D001261 ORTHO05D001130 9.6e-10 68.2 165 32.1
Sp1g03720 Schrenkiella parvula HOM05D001261 ORTHO05D001130 9.6e-10 68.2 139 36.0
TAR365G1158 Trochodendron aralioides HOM05D001261 ORTHO05D001130 9.6e-10 68.2 152 32.9
PGR142G3678 Punica granatum HOM05D001261 ORTHO05D001130 1.3e-09 67.8 184 31.5
Nitab4.5_0000898g0060 Nicotiana tabacum HOM05D001261 ORTHO05D001130 1.6e-09 67.4 159 37.1
Nitab4.5_0019106g0010 Nicotiana tabacum HOM05D001261 ORTHO05D001130 2.1e-09 67.0 174 32.2
Duzib268G0907 Durio zibethinus HOM05D001261 ORTHO05D001130 2.8e-09 66.6 212 28.8
Sabra16G0199400 Salix brachista HOM05D001261 ORTHO05D001130 2.8e-09 66.6 180 31.7
THA.LOC104801030 Tarenaya hassleriana HOM05D001261 ORTHO05D001130 2.8e-09 66.6 111 40.5
THA.LOC104827380 Tarenaya hassleriana HOM05D001261 ORTHO05D001130 2.8e-09 66.6 144 36.1
Lj5g0016874 Lotus japonicus HOM05D001261 ORTHO05D001130 3.7e-09 66.2 169 30.2
Peaxi162Scf00047g00519 Petunia axillaris HOM05D001261 ORTHO05D001130 3.7e-09 66.2 113 39.8
DCAR_024473 Daucus carota HOM05D001261 ORTHO05D001130 4.8e-09 65.9 160 30.0
AUR62018594 Chenopodium quinoa HOM05D001261 ORTHO05D001130 6.2e-09 65.5 211 28.9
Sc13g0000190 Simmondsia chinensis HOM05D001261 ORTHO05D001130 6.2e-09 65.5 126 36.5
Actinidia33185 Actinidia chinensis HOM05D001261 ORTHO05D001130 1.1e-08 64.7 109 35.8
AL1G14600 Arabidopsis lyrata HOM05D001261 ORTHO05D001130 1.4e-08 64.3 141 33.3
Glyma.10G294100 Glycine max HOM05D001261 ORTHO05D001130 1.4e-08 64.3 132 33.3
SGA_v2.0_scaffold57G20102 Striga asiatica HOM05D001261 ORTHO05D001130 1.4e-08 64.3 178 31.5
Lj6A553G29 Lonicera japonica HOM05D001261 ORTHO05D001130 2.4e-08 63.5 151 33.1
CARHR004270 Cardamine hirsuta HOM05D001261 ORTHO05D001130 3.1e-08 63.2 154 31.8
EL10Ac3g07478 Beta vulgaris HOM05D001261 ORTHO05D001130 4.0e-08 62.8 118 34.7
PGSC0003DMG400031288 Solanum tuberosum HOM05D001261 ORTHO05D001130 4.0e-08 62.8 134 35.1
FvH4_4g16370 Fragaria vesca HOM05D001261 ORTHO05D001130 5.3e-08 62.4 191 29.8
FAN12G3417 Fragaria x ananassa HOM05D001261 ORTHO05D001130 5.3e-08 62.4 191 29.8
TAR362G1235 Trochodendron aralioides HOM05D001261 ORTHO05D001130 6.9e-08 62.0 163 31.9
Phvul.007G006000 Phaseolus vulgaris HOM05D001261 ORTHO05D001130 9.0e-08 61.6 147 33.3
Aqoxy2G03859 Aquilegia oxysepala HOM05D001261 ORTHO05D001130 1.2e-07 61.2 145 29.0
A09p67700 Brassica napus HOM05D001261 ORTHO05D001130 1.2e-07 61.2 199 30.2
Thhalv10007631m.g Eutrema salsugineum HOM05D001261 ORTHO05D001130 1.2e-07 61.2 138 33.3
Psat0s2083g0160 Pisum sativum HOM05D001261 ORTHO05D001130 1.2e-07 61.2 172 31.4
Eucgr.H00052 Eucalyptus grandis HOM05D001261 ORTHO05D001130 1.5e-07 60.8 136 32.4
C08p52030 Brassica napus HOM05D001261 ORTHO05D001130 2.0e-07 60.5 199 30.2
BolC8t52735H Brassica oleracea HOM05D001261 ORTHO05D001130 2.0e-07 60.5 199 30.2
BraA09t42100Z Brassica rapa HOM05D001261 ORTHO05D001130 2.0e-07 60.5 160 31.9
Lalb_Chr21g0307471 Lupinus albus HOM05D001261 ORTHO05D001130 2.6e-07 60.1 151 33.1
BcaC07g42156 Brassica carinata HOM05D001261 ORTHO05D001130 3.4e-07 59.7 143 32.9
A10p03310 Brassica napus HOM05D001261 ORTHO05D001130 3.4e-07 59.7 144 34.0
BraA10t42607Z Brassica rapa HOM05D001261 ORTHO05D001130 3.4e-07 59.7 144 34.0
Psat0s2083g0240 Pisum sativum HOM05D001261 ORTHO05D001130 3.4e-07 59.7 172 31.4
TPR.G15603 Trifolium pratense HOM05D001261 ORTHO05D001130 3.4e-07 59.7 149 30.9
AT1G04880 Arabidopsis thaliana HOM05D001261 ORTHO05D001130 4.5e-07 59.3 156 30.1
BcaB02g06895 Brassica carinata HOM05D001261 ORTHO05D001130 4.5e-07 59.3 146 32.9
BcaB03g13467 Brassica carinata HOM05D001261 ORTHO05D001130 4.5e-07 59.3 153 33.3
Oeu013804.1 Olea europaea HOM05D001261 ORTHO05D289199 4.5e-07 59.3 120 32.5
Lj1g0017531 Lotus japonicus HOM05D001261 ORTHO05D001130 5.8e-07 58.9 149 30.9
Medtr7g005970 Medicago truncatula HOM05D001261 ORTHO05D001130 5.8e-07 58.9 170 31.2
Ca_11377_v3 Cicer arietinum L. HOM05D001261 ORTHO05D001130 1.3e-06 57.8 164 28.7
FAN17G1455 Fragaria x ananassa HOM05D001261 ORTHO05D001130 2.2e-06 57.0 191 29.3
FAN22G0086 Fragaria x ananassa HOM05D001261 ORTHO05D001130 2.2e-06 57.0 191 28.3
BcaC05g24433 Brassica carinata HOM05D001261 ORTHO05D001130 2.9e-06 56.6 149 31.5
C05p03030 Brassica napus HOM05D001261 ORTHO05D001130 2.9e-06 56.6 149 31.5
FAN07G2115 Fragaria x ananassa HOM05D001261 ORTHO05D001130 2.9e-06 56.6 191 28.3
Glyma.20G243900 Glycine max HOM05D001261 ORTHO05D001130 2.9e-06 56.6 129 33.3
Actinidia35864 Actinidia chinensis HOM05D001261 ORTHO05D001130 3.8e-06 56.2 187 28.3
CAN.G1635.7 Capsicum annuum HOM05D001261 ORTHO05D001130 3.8e-06 56.2 155 32.3
Medtr1g116180 Medicago truncatula HOM05D001261 ORTHO05D001130 3.8e-06 56.2 183 26.2
BolC5t29085H Brassica oleracea HOM05D001261 ORTHO05D001130 4.9e-06 55.8 129 34.1
vmacro00473 Vaccinium macrocarpon HOM05D001261 ORTHO05D001130 4.9e-06 55.8 256 23.4


User provided reference genes

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