Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu018570.1 Olea europaea HOM05D003678 ORTHO05D004340 3.0e-136 488.4 232 100.0
Oeu040383.1 Olea europaea HOM05D003678 ORTHO05D004340 3.2e-106 388.7 321 62.0
SGA_v2.0_scaffold193G40661 Striga asiatica HOM05D003678 ORTHO05D004340 1.6e-100 369.8 321 58.6
CSS0027905 Camellia sinensis var. sinensis HOM05D003678 ORTHO05D004340 1.1e-98 363.6 321 57.0
MSTRG.25776 Avicennia marina HOM05D003678 ORTHO05D004340 1.9e-98 362.8 320 56.9
Cc08_g06430 Coffea canephora HOM05D003678 ORTHO05D004340 1.9e-98 362.8 322 57.1
Cc08_g06510 Coffea canephora HOM05D003678 ORTHO05D004340 1.9e-98 362.8 322 57.1
Dinv18146 Davidia involucrata HOM05D003678 ORTHO05D004340 3.2e-98 362.1 321 57.9
SalBow4G1160 Salvia bowleyana HOM05D003678 ORTHO05D004340 4.2e-98 361.7 324 56.5
Actinidia03577 Actinidia chinensis HOM05D003678 ORTHO05D004340 9.5e-98 360.5 290 61.7
Cfa013262 Carpinus fangiana HOM05D003678 ORTHO05D004340 8.0e-97 357.5 320 55.9
GSVIVG01035534001 Vitis vinifera HOM05D003678 ORTHO05D004340 8.0e-97 357.5 287 62.0
Haze_21723 Corylus avellana HOM05D003678 ORTHO05D004340 1.8e-96 356.3 320 55.6
TAR626G0897 Trochodendron aralioides HOM05D003678 ORTHO05D004340 4.0e-96 355.1 320 55.9
Eucgr.C04005 Eucalyptus grandis HOM05D003678 ORTHO05D004340 5.2e-96 354.8 324 55.6
Nn8g40427 Nelumbo nucifera HOM05D003678 ORTHO05D004340 5.2e-96 354.8 314 56.4
vmacro05102 Vaccinium macrocarpon HOM05D003678 ORTHO05D004340 5.2e-96 354.8 321 56.4
Manes.03G003200 Manihot esculenta HOM05D003678 ORTHO05D004340 8.8e-96 354.0 319 57.4
Thecc.09G006300 Theobroma cacao HOM05D003678 ORTHO05D004340 1.2e-95 353.6 318 57.2
TAR626G0756 Trochodendron aralioides HOM05D003678 ORTHO05D004340 1.2e-95 353.6 322 56.2
DCAR_000669 Daucus carota HOM05D003678 ORTHO05D004340 3.4e-95 352.1 313 56.2
Migut.A00439 Erythranthe guttata HOM05D003678 ORTHO05D004340 3.4e-95 352.1 319 56.4
Hund03284 Selenicereus undatus HOM05D003678 ORTHO05D004340 5.7e-95 351.3 321 54.2
Nitab4.5_0005481g0010 Nicotiana tabacum HOM05D003678 ORTHO05D004340 1.3e-94 350.1 325 55.1
Gohir.A05G065000 Gossypium hirsutum HOM05D003678 ORTHO05D004340 1.7e-94 349.7 318 56.9
Gorai.009G068400 Gossypium raimondii HOM05D003678 ORTHO05D004340 1.7e-94 349.7 318 56.9
Peaxi162Scf00459g00837 Petunia axillaris HOM05D003678 ORTHO05D004340 1.7e-94 349.7 319 56.7
Dinv03491 Davidia involucrata HOM05D003678 ORTHO05D004340 3.7e-94 348.6 318 56.0
Gohir.D05G067600 Gossypium hirsutum HOM05D003678 ORTHO05D004340 6.3e-94 347.8 320 56.2
QL12p024946 Quercus lobata HOM05D003678 ORTHO05D004340 6.3e-94 347.8 321 55.5
Prupe.1G461000 Prunus persica HOM05D003678 ORTHO05D004340 8.3e-94 347.4 321 55.1
Gorai.001G001500 Gossypium raimondii HOM05D003678 ORTHO05D004340 1.4e-93 346.7 303 58.1
Solyc12g096450.2 Solanum lycopersicum HOM05D003678 ORTHO05D004340 1.4e-93 346.7 329 54.4
Cpa.g.sc23.4 Carica papaya HOM05D003678 ORTHO05D004340 2.4e-93 345.9 322 55.0
Gohir.D07G001800 Gossypium hirsutum HOM05D003678 ORTHO05D004340 2.4e-93 345.9 303 58.1
MD15G1108800 Malus domestica HOM05D003678 ORTHO05D004340 2.4e-93 345.9 315 55.6
PGR044G2213 Punica granatum HOM05D003678 ORTHO05D004340 4.1e-93 345.1 322 53.4
Ah.06g192800 Amaranthus hybridus HOM05D003678 ORTHO05D004340 1.2e-92 343.6 323 52.6
Potri.006G275300 Populus trichocarpa HOM05D003678 ORTHO05D004340 1.6e-92 343.2 322 54.7
Gohir.A07G001400 Gossypium hirsutum HOM05D003678 ORTHO05D004340 2.0e-92 342.8 304 58.2
Sopen12g032280 Solanum pennellii HOM05D003678 ORTHO05D004340 2.0e-92 342.8 329 53.8
PGSC0003DMG400029367 Solanum tuberosum HOM05D003678 ORTHO05D004340 2.0e-92 342.8 328 53.4
Hma1.2p1_0379F.1_g139790 Hydrangea macrophylla HOM05D003678 ORTHO05D004340 2.7e-92 342.4 319 54.2
Hma1.2p1_0891F.1_g233175 Hydrangea macrophylla HOM05D003678 ORTHO05D004340 2.7e-92 342.4 319 54.2
arahy.Tifrunner.gnm1.ann1.DFD6U9 Arachis hypogaea HOM05D003678 ORTHO05D004340 4.5e-92 341.7 323 54.8
Nitab4.5_0001110g0180 Nicotiana tabacum HOM05D003678 ORTHO05D004340 4.5e-92 341.7 331 53.8
Aqoxy7G03011 Aquilegia oxysepala HOM05D003678 ORTHO05D004340 5.9e-92 341.3 323 53.3
Atru.chr7.2631 Acer truncatum HOM05D003678 ORTHO05D004340 7.8e-92 340.9 321 54.8
arahy.Tifrunner.gnm1.ann1.P9WJGS Arachis hypogaea HOM05D003678 ORTHO05D004340 1.3e-91 340.1 323 54.5
Glyma.11G172610 Glycine max HOM05D003678 ORTHO05D004340 1.7e-91 339.7 318 55.3
Glyma.17G200200 Glycine max HOM05D003678 ORTHO05D004340 1.7e-91 339.7 322 54.7
Duzib168G2376 Durio zibethinus HOM05D003678 ORTHO05D004340 2.9e-91 339.0 320 55.0
Glyma.11G172819 Glycine max HOM05D003678 ORTHO05D004340 3.8e-91 338.6 322 54.3
Ciclev10008476m.g Citrus clementina HOM05D003678 ORTHO05D004340 5.0e-91 338.2 325 53.8
Sabra06G0213100 Salix brachista HOM05D003678 ORTHO05D004340 8.6e-91 337.4 322 53.4
TWI63G1033 Tripterygium wilfordii HOM05D003678 ORTHO05D004340 8.6e-91 337.4 324 53.1
PSO170G4284 Papaver somniferum HOM05D003678 ORTHO05D004340 1.9e-90 336.3 313 54.3
RcHm_v2.0_Chr6g0304871 Rosa chinensis HOM05D003678 ORTHO05D004340 1.9e-90 336.3 325 52.3
Glyma.17G189600 Glycine max HOM05D003678 ORTHO05D004340 4.3e-90 335.1 318 54.4
TAR383G0188 Trochodendron aralioides HOM05D003678 ORTHO05D004340 5.6e-90 334.7 318 53.5
CAN.G566.61 Capsicum annuum HOM05D003678 ORTHO05D004340 7.3e-90 334.3 326 53.4
CiPaw.08G019100 Carya illinoinensis HOM05D003678 ORTHO05D004340 7.3e-90 334.3 318 53.5
PSO063G6534 Papaver somniferum HOM05D003678 ORTHO05D004340 7.3e-90 334.3 313 54.6
Potri.018G006300 Populus trichocarpa HOM05D003678 ORTHO05D004340 1.2e-89 333.6 322 54.0
Lj5g0015114 Lotus japonicus HOM05D003678 ORTHO05D004340 2.1e-89 332.8 325 53.2
TAR383G0531 Trochodendron aralioides HOM05D003678 ORTHO05D004340 2.8e-89 332.4 318 53.5
FAN15G2333 Fragaria x ananassa HOM05D003678 ORTHO05D004340 4.7e-89 331.6 318 52.5
Lalb_Chr14g0362261 Lupinus albus HOM05D003678 ORTHO05D004340 4.7e-89 331.6 329 52.3
Rhsim07G0170500 Rhododendron simsii HOM05D003678 ORTHO05D004340 6.1e-89 331.3 321 53.9
AUR62009050 Chenopodium quinoa HOM05D003678 ORTHO05D004340 1.0e-88 330.5 321 51.1
Thhalv10025366m.g Eutrema salsugineum HOM05D003678 ORTHO05D004340 1.4e-88 330.1 317 53.3
FvH4_2g36910 Fragaria vesca HOM05D003678 ORTHO05D004340 1.4e-88 330.1 319 52.4
FAN20G0096 Fragaria x ananassa HOM05D003678 ORTHO05D004340 1.4e-88 330.1 320 52.2
AUR62020613 Chenopodium quinoa HOM05D003678 ORTHO05D004340 2.3e-88 329.3 321 51.1
VMungo0647G0546 Vigna mungo HOM05D003678 ORTHO05D004340 3.0e-88 328.9 323 53.3
Ca_12869_v3 Cicer arietinum L. HOM05D003678 ORTHO05D004340 4.0e-88 328.6 318 54.1
CANSAT25G1292 Cannabis sativa HOM05D003678 ORTHO05D004340 5.2e-88 328.2 326 52.8
Peaxi162Scf00045g01736 Petunia axillaris HOM05D003678 ORTHO05D004340 5.2e-88 328.2 321 53.0
FAN27G1333 Fragaria x ananassa HOM05D003678 ORTHO05D004340 6.8e-88 327.8 315 53.0
HanXRQChr16g0504351 Helianthus annuus HOM05D003678 ORTHO05D004340 6.8e-88 327.8 304 54.3
Lsat_1_v5_gn_6_15381 Lactuca sativa HOM05D003678 ORTHO05D004340 6.8e-88 327.8 318 53.1
MBI16_g31785_MAGBIO Magnolia biondii HOM05D003678 ORTHO05D004340 6.8e-88 327.8 323 52.3
Psat6g032480 Pisum sativum HOM05D003678 ORTHO05D004340 1.2e-87 327.0 312 53.5
CANSAT11G2609 Cannabis sativa HOM05D003678 ORTHO05D004340 2.0e-87 326.2 324 52.2
CARHR239300 Cardamine hirsuta HOM05D003678 ORTHO05D004340 3.4e-87 325.5 318 52.8
Carub.0007s0914 Capsella rubella HOM05D003678 ORTHO05D004340 5.7e-87 324.7 318 52.8
BcaNung04590 Brassica carinata HOM05D003678 ORTHO05D004340 1.7e-86 323.2 313 52.1
AL7G20640 Arabidopsis lyrata HOM05D003678 ORTHO05D004340 2.2e-86 322.8 316 52.2
HanXRQChr16g0513211 Helianthus annuus HOM05D003678 ORTHO05D004340 2.2e-86 322.8 322 51.9
A01p06860 Brassica napus HOM05D003678 ORTHO05D004340 2.9e-86 322.4 310 52.3
unitig_32.g11644 Utricularia gibba HOM05D003678 ORTHO05D004340 2.9e-86 322.4 315 51.7
Aa31LG2G18930 Aethionema arabicum HOM05D003678 ORTHO05D004340 3.7e-86 322.0 315 51.1
CAN.G673.15 Capsicum annuum HOM05D003678 ORTHO05D004340 3.7e-86 322.0 312 53.2
CDE02G2639 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 1.1e-85 320.5 316 51.6
Lalb_Chr24g0402471 Lupinus albus HOM05D003678 ORTHO05D004340 1.1e-85 320.5 329 51.4
THA.LOC104803597 Tarenaya hassleriana HOM05D003678 ORTHO05D004340 1.1e-85 320.5 325 50.5
Zm00001eb226230 Zea mays HOM05D003678 ORTHO05D004340 1.4e-85 320.1 318 52.8
BcaC09g51921 Brassica carinata HOM05D003678 ORTHO05D004340 2.4e-85 319.3 318 50.9
C01p07630 Brassica napus HOM05D003678 ORTHO05D004340 2.4e-85 319.3 318 50.9
BraA01t00637Z Brassica rapa HOM05D003678 ORTHO05D004340 2.4e-85 319.3 311 52.1
Carub.0004s0384 Capsella rubella HOM05D003678 ORTHO05D004340 2.4e-85 319.3 317 50.2
Sp7g29280 Schrenkiella parvula HOM05D003678 ORTHO05D004340 2.4e-85 319.3 315 52.4
AT2G24500 Arabidopsis thaliana HOM05D003678 ORTHO05D004340 3.2e-85 318.9 311 50.5
Phvul.001G058800 Phaseolus vulgaris HOM05D003678 ORTHO05D004340 3.2e-85 318.9 327 51.1
EL10Ac2g03738 Beta vulgaris HOM05D003678 ORTHO05D004340 4.1e-85 318.5 350 48.0
PGSC0003DMG401026315 Solanum tuberosum HOM05D003678 ORTHO05D004340 4.1e-85 318.5 301 53.8
AT4G31420 Arabidopsis thaliana HOM05D003678 ORTHO05D004340 5.4e-85 318.2 320 50.9
ClCG05G017500 Citrullus lanatus HOM05D003678 ORTHO05D004340 5.4e-85 318.2 301 54.5
Sopen08g002420 Solanum pennellii HOM05D003678 ORTHO05D004340 7.0e-85 317.8 285 54.0
HanXRQChr12g0384061 Helianthus annuus HOM05D003678 ORTHO05D004340 9.2e-85 317.4 306 52.9
Sed0010708 Sechium edule HOM05D003678 ORTHO05D004340 1.2e-84 317.0 301 54.2
ECA233G4849 Erigeron canadensis HOM05D003678 ORTHO05D004340 2.0e-84 316.2 314 51.0
Medtr1g009770 Medicago truncatula HOM05D003678 ORTHO05D004340 2.0e-84 316.2 321 50.5
BcaB06g27975 Brassica carinata HOM05D003678 ORTHO05D004340 2.7e-84 315.8 317 49.5
Lsat_1_v5_gn_3_27981 Lactuca sativa HOM05D003678 ORTHO05D004340 2.7e-84 315.8 313 54.0
Thhalv10000189m.g Eutrema salsugineum HOM05D003678 ORTHO05D004340 3.5e-84 315.5 319 48.9
BolC1t00743H Brassica oleracea HOM05D003678 ORTHO05D004340 4.6e-84 315.1 319 50.8
CiPaw.07G213700 Carya illinoinensis HOM05D003678 ORTHO05D004340 4.6e-84 315.1 326 50.3
Sed0004467 Sechium edule HOM05D003678 ORTHO05D004340 7.8e-84 314.3 299 53.8
MELO3C003636.2 Cucumis melo HOM05D003678 ORTHO05D004340 1.7e-83 313.2 300 53.7
CsaV3_3G047000 Cucumis sativus L. HOM05D003678 ORTHO05D004340 1.7e-83 313.2 302 53.0
Aa31LG7G11470 Aethionema arabicum HOM05D003678 ORTHO05D004340 3.9e-83 312.0 312 52.6
CARHR117530 Cardamine hirsuta HOM05D003678 ORTHO05D004340 3.9e-83 312.0 316 49.4
Solyc08g006470.4 Solanum lycopersicum HOM05D003678 ORTHO05D004340 5.0e-83 311.6 283 53.0
AL4G14980 Arabidopsis lyrata HOM05D003678 ORTHO05D004340 8.6e-83 310.8 314 49.0
Os06g0693500 Oryza sativa ssp. japonica HOM05D003678 ORTHO05D004340 1.1e-82 310.5 314 51.3
TPR.G12018 Trifolium pratense HOM05D003678 ORTHO05D004340 2.5e-82 309.3 357 46.5
BraA09t41018Z Brassica rapa HOM05D003678 ORTHO05D004340 6.2e-81 304.7 318 48.4
Sp4g03510 Schrenkiella parvula HOM05D003678 ORTHO05D004340 8.0e-81 304.3 317 47.9
C04p54110 Brassica napus HOM05D003678 ORTHO05D004340 4.0e-80 302.0 320 47.8
BraA04t17489Z Brassica rapa HOM05D003678 ORTHO05D004340 5.2e-80 301.6 321 47.7
BcaC02g08448 Brassica carinata HOM05D003678 ORTHO05D004340 8.9e-80 300.8 323 47.4
BolC4t26963H Brassica oleracea HOM05D003678 ORTHO05D004340 8.9e-80 300.8 323 47.4
HPP92_010767 Vanilla planifolia HOM05D003678 ORTHO05D004340 2.0e-79 299.7 328 47.9
A04p18800 Brassica napus HOM05D003678 ORTHO05D004340 2.6e-79 299.3 323 47.1
Nitab4.5_0000555g0240 Nicotiana tabacum HOM05D003678 ORTHO05D004340 4.4e-79 298.5 326 48.5
MD08G1131000 Malus domestica HOM05D003678 ORTHO05D004340 9.8e-79 297.4 279 54.1
Sc09g0008090 Simmondsia chinensis HOM05D003678 ORTHO05D004340 2.9e-78 295.8 289 52.2
A09p56240 Brassica napus HOM05D003678 ORTHO05D004340 3.5e-76 288.9 341 44.6
C08p39190 Brassica napus HOM05D003678 ORTHO05D004340 3.3e-74 282.3 259 52.9
BolC8t51492H Brassica oleracea HOM05D003678 ORTHO05D004340 3.3e-74 282.3 259 52.9
BcaC07g40924 Brassica carinata HOM05D003678 ORTHO05D004340 5.6e-74 281.6 279 50.9
COL.COLO4_19043 Corchorus olitorius HOM05D003678 ORTHO05D004340 7.3e-74 281.2 284 53.2
ATR0580G292 Amborella trichopoda HOM05D003678 ORTHO05D004340 4.0e-72 275.4 313 46.0
Manes.16G136200 Manihot esculenta HOM05D003678 ORTHO05D004340 1.2e-71 273.9 308 49.7
Lj7A752T54 Lonicera japonica HOM05D003678 ORTHO05D004340 1.0e-67 260.8 286 49.7
SEGI_16726 Sequoiadendron giganteum HOM05D003678 ORTHO05D004340 6.6e-67 258.1 326 42.6
Mapoly0085s0044 Marchantia polymorpha HOM05D003678 ORTHO05D004340 9.2e-61 237.7 318 41.2
ECA246G1371 Erigeron canadensis HOM05D000763 ORTHO05D004340 3.5e-60 235.7 275 46.5
Pp3c2_4670 Physcomitrium patens HOM05D003678 ORTHO05D004340 8.4e-54 214.5 325 37.2
SMO143G0266 Selaginella moellendorffii HOM05D003678 ORTHO05D004340 9.6e-50 201.1 305 38.7
CDE05G3053 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 8.1e-49 198.0 228 46.5
BcaC07g37410 Brassica carinata HOM05D003678 ORTHO05D004340 6.9e-48 194.9 221 48.0
Medtr1g047010 Medicago truncatula HOM05D003678 ORTHO05D004340 4.5e-47 192.2 261 42.9
CDE05G1087 Ceratophyllum demersum HOM05D003678 ORTHO05D004340 2.8e-41 172.9 276 37.3
AagrBONN_evm.TU.Sc2ySwM_228.5550 Anthoceros agrestis HOM05D003678 ORTHO05D004340 1.4e-40 170.6 252 41.3
Nitab4.5_0004131g0030 Nicotiana tabacum HOM05D003678 ORTHO05D004340 2.4e-40 169.9 253 42.7
CBR_g30359 Chara braunii HOM05D003678 ORTHO05D004340 2.2e-38 163.3 366 30.6
Pp3c14_26000 Physcomitrium patens HOM05D003678 ORTHO05D004340 4.3e-34 149.1 151 50.3
BolC8t47735H Brassica oleracea HOM05D003678 ORTHO05D004340 1.2e-31 141.0 157 50.3
C03p31060 Brassica napus HOM05D003678 ORTHO05D004340 3.4e-31 139.4 155 51.0
TAR383G1077 Trochodendron aralioides HOM05D003678 ORTHO05D004340 3.4e-31 139.4 287 33.8
CAN.G4.3 Capsicum annuum HOM05D003678 ORTHO05D004340 6.5e-30 135.2 94 67.0
BolC1t05292H Brassica oleracea HOM05D003678 ORTHO05D004340 8.2e-25 118.2 201 35.8
BcaC06g31298 Brassica carinata HOM05D003678 ORTHO05D004340 3.9e-19 99.4 62 69.4
BcaB03g16788 Brassica carinata HOM05D003678 ORTHO05D004340 1.5e-18 97.4 96 51.0
ECA246G0440 Erigeron canadensis HOM05D003678 ORTHO05D004340 1.9e-18 97.1 121 42.1
BcaC05g27745 Brassica carinata HOM05D003678 ORTHO05D004340 2.2e-17 93.6 68 63.2
C05p37300 Brassica napus HOM05D003678 ORTHO05D004340 2.2e-17 93.6 68 63.2
C08p08900 Brassica napus HOM05D003678 ORTHO05D004340 4.8e-17 92.4 68 61.8
BcaC09g48197 Brassica carinata HOM05D003678 ORTHO05D011193 2.0e-15 87.0 47 78.7
Cfa025296 Carpinus fangiana HOM05D003678 ORTHO05D004340 5.9e-15 85.5 313 24.0
PRCOL_00002050 Prasinoderma coloniale HOM05D003678 ORTHO05D004340 3.2e-13 79.7 315 25.4
ECA246G4346 Erigeron canadensis HOM05D000087 ORTHO05D009473 4.2e-13 79.3 68 63.2
BcaC05g28588 Brassica carinata HOM05D015584 ORTHO05D016118 1.8e-11 73.9 53 60.4
Medtr5g061270 Medicago truncatula HOM05D003678 ORTHO05D004340 3.0e-11 73.2 52 63.5
BcaC01g05020 Brassica carinata HOM05D003678 ORTHO05D004340 3.7e-09 66.2 50 62.0
C05p46930 Brassica napus HOM05D003678 ORTHO05D016118 4.1e-08 62.8 49 57.1
BolC5t33423H Brassica oleracea HOM05D003678 ORTHO05D016118 4.1e-08 62.8 49 57.1
Cre17.g716400 Chlamydomonas reinhardtii HOM05D003678 ORTHO05D004340 4.1e-08 62.8 135 32.6
A04p16990 Brassica napus HOM05D003678 ORTHO05D004340 3.4e-07 59.7 52 55.8
BcaC09g48198 Brassica carinata HOM05D003678 ORTHO05D004340 5.9e-07 58.9 46 58.7
Actinidia14145 Actinidia chinensis HOM05D003678 ORTHO05D004340 7.7e-07 58.5 43 58.1
BcaC08g45872 Brassica carinata HOM05D005572 ORTHO05D032868 1.3e-06 57.8 31 83.9
Pp3c17_19500 Physcomitrium patens HOM05D003678 ORTHO05D004340 8.5e-06 55.1 51 41.2


User provided reference genes

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