Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 4.4e-74 281.2 139 100.0
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 1.5e-53 213.0 136 80.9
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 6.1e-52 207.6 136 77.9
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 6.8e-51 204.1 136 77.2
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 8.9e-51 203.8 136 75.7
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 8.9e-51 203.8 136 75.7
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 3.4e-50 201.8 136 75.7
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 4.4e-50 201.4 136 75.7
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 4.4e-50 201.4 134 76.1
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 4.4e-50 201.4 134 76.1
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 5.7e-50 201.1 137 75.2
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 5.7e-50 201.1 136 75.0
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 9.8e-50 200.3 136 75.0
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 9.8e-50 200.3 136 75.7
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 9.8e-50 200.3 130 77.7
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 1.3e-49 199.9 135 74.8
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.7e-49 199.5 136 75.7
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.7e-49 199.5 136 75.0
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 2.2e-49 199.1 134 74.6
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 2.9e-49 198.7 135 74.1
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 2.9e-49 198.7 138 75.4
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 2.9e-49 198.7 133 74.4
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 3.7e-49 198.4 136 75.0
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 3.7e-49 198.4 136 75.0
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 6.4e-49 197.6 136 72.1
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 8.3e-49 197.2 136 75.0
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 1.1e-48 196.8 136 74.3
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.8e-48 196.1 136 74.3
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 1.8e-48 196.1 137 73.0
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 1.8e-48 196.1 137 73.0
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 1.8e-48 196.1 135 72.6
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 1.8e-48 196.1 136 70.6
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 2.4e-48 195.7 136 73.5
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 2.4e-48 195.7 136 73.5
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.4e-48 195.7 136 73.5
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 2.4e-48 195.7 134 74.6
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 3.2e-48 195.3 135 74.8
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 3.2e-48 195.3 138 73.9
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 3.2e-48 195.3 136 73.5
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 4.1e-48 194.9 136 73.5
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 4.1e-48 194.9 136 73.5
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 5.4e-48 194.5 136 72.8
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 7.0e-48 194.1 136 72.8
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 9.2e-48 193.7 135 71.9
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.2e-47 193.4 135 71.9
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.2e-47 193.4 136 72.8
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 1.2e-47 193.4 136 72.8
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 1.2e-47 193.4 136 72.8
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 1.2e-47 193.4 140 73.6
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.2e-47 193.4 134 75.4
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 1.6e-47 193.0 136 72.8
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 2.0e-47 192.6 136 72.8
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 2.0e-47 192.6 136 72.8
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 2.7e-47 192.2 135 72.6
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 2.7e-47 192.2 135 72.6
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 7.8e-47 190.7 136 72.1
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 7.8e-47 190.7 136 72.1
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 7.8e-47 190.7 165 63.0
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 7.8e-47 190.7 136 72.1
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 1.0e-46 190.3 112 83.9
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 1.0e-46 190.3 136 72.1
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 1.3e-46 189.9 136 72.8
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 1.3e-46 189.9 136 72.1
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.7e-46 189.5 152 67.1
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 1.1e-45 186.8 135 68.9
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 1.1e-45 186.8 138 71.0
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 1.1e-45 186.8 136 69.9
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 1.5e-45 186.4 135 70.4
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 1.5e-45 186.4 135 68.1
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 1.9e-45 186.0 138 71.7
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 1.9e-45 186.0 138 70.3
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 2.5e-45 185.7 135 67.4
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 3.3e-45 185.3 136 69.9
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 5.6e-45 184.5 135 67.4
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 5.6e-45 184.5 135 67.4
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 5.6e-45 184.5 135 67.4
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 5.6e-45 184.5 135 67.4
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 7.3e-45 184.1 131 68.7
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 9.5e-45 183.7 135 66.7
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 9.5e-45 183.7 129 70.5
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 9.5e-45 183.7 136 68.4
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.2e-44 183.3 151 59.6
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 1.2e-44 183.3 135 66.7
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 1.2e-44 183.3 135 66.7
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 1.2e-44 183.3 135 66.7
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 1.2e-44 183.3 135 66.7
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 1.2e-44 183.3 135 66.7
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 1.2e-44 183.3 135 66.7
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 1.2e-44 183.3 129 70.5
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 1.2e-44 183.3 131 69.5
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 1.2e-44 183.3 111 81.1
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 2.1e-44 182.6 134 70.1
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 2.8e-44 182.2 135 66.7
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 2.8e-44 182.2 135 66.7
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 2.8e-44 182.2 134 70.1
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 3.6e-44 181.8 143 68.5
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 3.6e-44 181.8 134 69.4
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 6.8e-43 177.6 169 58.0
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 4.4e-42 174.9 112 74.1
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 4.4e-42 174.9 135 65.2
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.2e-41 172.6 136 64.7
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 3.7e-41 171.8 133 65.4
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 4.9e-41 171.4 148 64.2
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.1e-40 170.2 133 64.7
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 1.9e-40 169.5 111 71.2
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 1.6e-39 166.4 115 73.9
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 7.3e-37 157.5 105 74.3
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 6.2e-36 154.5 111 66.7
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 6.2e-36 154.5 108 73.1
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 1.1e-35 153.7 111 64.0
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 9.8e-34 147.1 131 55.0
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 8.3e-33 144.1 103 70.9
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 7.8e-31 137.5 100 71.0
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 3.9e-30 135.2 102 67.6
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 6.2e-28 127.9 135 46.7
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 5.6e-21 104.8 99 55.6
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.0e-18 96.3 98 57.1
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 4.4e-18 95.1 80 65.0
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 1.1e-16 90.5 56 82.1
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 7.6e-10 67.8 29 93.1
Psat6g107920 Pisum sativum HOM05D032184 ORTHO05D330502 1.0e-06 57.4 28 89.3


User provided reference genes

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