Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 5.0e-116 421.0 197 100.0
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 3.8e-108 394.8 191 94.8
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 6.6e-108 394.0 193 93.8
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 4.2e-107 391.3 189 94.7
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 4.2e-107 391.3 189 94.7
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 5.5e-107 391.0 191 93.7
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 5.5e-107 391.0 191 93.7
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 2.1e-106 389.0 189 94.2
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 2.8e-106 388.7 191 92.7
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 5.2e-105 384.4 191 91.6
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 6.8e-105 384.0 189 91.5
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 6.8e-105 384.0 190 91.1
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 1.2e-104 383.3 191 92.1
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 1.2e-104 383.3 190 91.1
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 1.5e-104 382.9 191 92.1
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 1.5e-104 382.9 189 92.6
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 4.4e-104 381.3 191 91.6
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 4.4e-104 381.3 191 92.1
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 4.4e-104 381.3 191 91.1
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 9.8e-104 380.2 191 91.6
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 9.8e-104 380.2 191 90.6
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 1.7e-103 379.4 191 90.6
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 3.7e-103 378.3 190 90.0
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 3.7e-103 378.3 190 90.0
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 4.9e-103 377.9 191 91.6
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 6.3e-103 377.5 189 90.5
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 8.3e-103 377.1 191 90.6
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 1.1e-102 376.7 190 90.0
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 1.8e-102 375.9 191 90.6
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 1.8e-102 375.9 191 91.1
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 2.4e-102 375.6 191 90.6
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 3.1e-102 375.2 191 90.6
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 4.1e-102 374.8 207 84.5
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 5.4e-102 374.4 191 90.6
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 5.4e-102 374.4 191 90.6
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 7.0e-102 374.0 191 89.5
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 7.0e-102 374.0 191 90.1
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 7.0e-102 374.0 191 90.1
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 7.0e-102 374.0 191 89.5
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 7.0e-102 374.0 189 91.0
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 1.6e-101 372.9 191 90.1
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.0e-101 372.5 191 89.5
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 2.0e-101 372.5 191 89.5
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 2.0e-101 372.5 191 90.1
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 3.5e-101 371.7 191 89.5
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 5.9e-101 370.9 191 90.1
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 7.8e-101 370.5 191 87.4
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.3e-100 369.8 191 89.5
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 1.7e-100 369.4 190 87.4
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 1.7e-100 369.4 191 88.0
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 1.7e-100 369.4 191 88.0
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 6.6e-100 367.5 188 89.9
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 6.6e-100 367.5 191 89.0
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 8.6e-100 367.1 191 87.4
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 1.5e-99 366.3 192 87.5
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.9e-99 365.9 191 88.5
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 3.3e-99 365.2 191 88.5
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 4.3e-99 364.8 222 78.8
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 5.6e-99 364.4 191 85.3
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 9.5e-99 363.6 188 87.8
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 1.4e-97 359.8 190 86.8
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 1.8e-97 359.4 188 86.2
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 5.2e-97 357.8 192 87.5
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 5.2e-97 357.8 191 85.9
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 8.9e-97 357.1 187 86.1
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 8.9e-97 357.1 170 95.3
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 8.9e-97 357.1 192 87.0
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 4.4e-96 354.8 202 82.7
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 4.4e-96 354.8 191 86.4
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 9.8e-96 353.6 190 85.3
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 9.8e-96 353.6 191 86.4
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 6.4e-95 350.9 190 82.6
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 6.4e-95 350.9 190 82.6
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 6.4e-95 350.9 190 82.6
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 6.4e-95 350.9 190 82.6
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 6.4e-95 350.9 190 82.6
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 1.1e-94 350.1 190 82.1
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 1.4e-94 349.7 190 82.1
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 1.4e-94 349.7 190 82.1
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 1.9e-94 349.4 190 81.6
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 2.4e-94 349.0 191 84.8
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 3.2e-94 348.6 203 80.8
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 7.0e-94 347.4 190 83.2
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 9.2e-94 347.1 190 82.1
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 9.2e-94 347.1 190 81.6
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 1.2e-93 346.7 224 74.6
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 2.0e-93 345.9 190 81.6
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 2.0e-93 345.9 190 81.6
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 4.6e-93 344.7 187 82.9
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 6.0e-93 344.4 193 81.9
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 1.0e-92 343.6 190 80.0
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 2.3e-92 342.4 190 80.5
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 2.3e-92 342.4 190 80.5
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 1.6e-90 336.3 190 80.0
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 2.8e-90 335.5 189 79.9
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 3.6e-90 335.1 163 92.0
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 4.0e-89 331.6 202 75.2
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 7.5e-88 327.4 158 91.1
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 9.8e-88 327.0 191 80.6
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 3.7e-87 325.1 191 81.7
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 7.8e-85 317.4 190 74.2
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.7e-84 316.2 189 75.1
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.5e-83 312.4 190 76.8
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.2e-82 310.1 190 75.8
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 4.4e-80 301.6 157 85.4
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.4e-78 296.6 157 83.4
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 1.6e-74 283.1 135 94.1
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.8e-74 282.3 191 70.2
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 5.8e-72 274.6 153 83.7
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 1.7e-71 273.1 205 63.4
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 2.2e-71 272.7 212 65.1
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 8.7e-68 260.8 195 60.5
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 1.1e-67 260.4 198 61.6
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 1.3e-60 236.9 196 54.1
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 9.3e-54 214.2 136 80.9
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 5.6e-51 204.9 114 84.2
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 5.3e-49 198.4 107 80.4
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 4.5e-48 195.3 162 58.0
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.7e-47 193.4 101 91.1
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 3.9e-44 182.2 107 77.6
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 8.4e-39 164.5 93 78.5
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 1.4e-38 163.7 91 80.2
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 1.8e-36 156.8 75 90.7
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 3.8e-31 139.0 93 67.7
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 2.3e-28 129.8 79 79.7
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 3.0e-28 129.4 74 82.4
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 4.3e-27 125.6 62 91.9
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 5.9e-24 115.2 150 40.0
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 2.2e-15 86.7 140 37.1
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 9.4e-14 81.3 128 39.1
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.1e-09 67.8 29 93.1
Psat6g107920 Pisum sativum HOM05D032184 ORTHO05D330502 1.5e-06 57.4 28 89.3


User provided reference genes

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