Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 3.3e-181 638.3 321 100.0
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.5e-88 329.7 325 57.8
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 1.2e-87 327.4 319 57.4
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 1.6e-87 327.0 325 57.2
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 3.6e-87 325.9 337 55.5
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.0e-86 324.3 319 56.1
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 1.4e-86 323.9 342 55.3
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 1.3e-84 317.4 325 56.0
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 3.7e-84 315.8 325 55.4
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 3.1e-83 312.8 325 55.7
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 7.0e-83 311.6 320 55.6
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 7.0e-83 311.6 325 55.1
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 7.7e-82 308.1 322 55.9
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.3e-81 307.4 319 55.8
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 1.7e-81 307.0 325 54.2
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 3.8e-81 305.8 319 54.2
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 3.2e-80 302.8 323 55.1
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 5.5e-80 302.0 325 53.2
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 9.4e-80 301.2 319 54.5
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 9.4e-80 301.2 325 55.1
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 3.6e-79 299.3 325 53.8
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 3.6e-79 299.3 325 54.5
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 6.1e-79 298.5 325 53.8
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 6.1e-79 298.5 320 53.4
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 8.0e-79 298.1 321 55.5
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.0e-78 297.7 326 53.4
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.4e-78 297.4 326 52.5
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 2.3e-78 296.6 325 53.5
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 4.0e-78 295.8 325 52.3
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 8.8e-78 294.7 325 52.0
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 2.0e-77 293.5 325 52.3
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 4.4e-77 292.4 325 51.4
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 5.7e-77 292.0 325 52.9
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 5.7e-77 292.0 325 54.2
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 4.8e-76 288.9 325 53.2
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 8.3e-76 288.1 326 52.5
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 8.3e-76 288.1 325 52.3
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 1.1e-75 287.7 325 51.7
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 1.4e-75 287.3 325 51.7
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 1.4e-75 287.3 325 52.0
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 1.8e-75 287.0 325 53.2
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 2.4e-75 286.6 325 52.9
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 9.1e-75 284.6 325 51.4
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 9.1e-75 284.6 325 51.4
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 3.5e-74 282.7 326 51.5
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 3.5e-74 282.7 327 52.0
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 1.0e-73 281.2 332 51.8
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 2.2e-73 280.0 324 51.2
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 1.5e-72 277.3 325 52.3
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.5e-72 277.3 326 50.9
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 3.2e-72 276.2 325 52.3
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 9.4e-72 274.6 327 52.0
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 2.7e-71 273.1 320 51.9
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 3.6e-71 272.7 326 51.8
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.0e-70 271.2 331 48.9
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 3.0e-70 269.6 396 45.2
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 1.2e-69 267.7 319 50.2
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.5e-69 267.3 319 48.9
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 7.5e-69 265.0 401 44.1
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 2.2e-68 263.5 325 49.5
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 3.7e-68 262.7 319 48.9
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 7.0e-67 258.5 324 50.0
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 9.1e-67 258.1 328 49.7
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 1.6e-66 257.3 325 50.2
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 3.5e-66 256.1 322 50.3
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 4.5e-66 255.8 319 48.9
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 5.9e-66 255.4 329 49.2
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 5.9e-66 255.4 331 49.2
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.9e-65 253.1 325 48.0
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 8.6e-65 251.5 322 50.3
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.9e-64 250.4 323 49.8
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 2.8e-63 246.5 319 46.1
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 6.8e-62 241.9 328 46.0
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 3.4e-61 239.6 319 46.7
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 1.3e-60 237.7 332 46.1
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 2.7e-58 229.9 320 44.7
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 5.9e-58 228.8 319 48.0
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 5.0e-57 225.7 326 45.4
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 8.6e-57 224.9 320 46.2
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 4.3e-56 222.6 328 45.7
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 2.3e-54 216.9 323 44.3
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 5.2e-54 215.7 192 60.4
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 6.8e-54 215.3 327 43.1
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 8.9e-54 214.9 192 60.9
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 1.2e-53 214.5 252 51.6
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 2.6e-53 213.4 186 62.4
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 3.4e-53 213.0 192 58.3
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 5.8e-53 212.2 325 44.9
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.7e-52 210.7 319 43.3
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 2.9e-52 209.9 187 62.0
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 4.9e-52 209.1 320 43.8
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.4e-51 207.6 258 48.1
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 7.0e-51 205.3 320 43.4
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 1.6e-50 204.1 321 41.7
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 4.6e-50 202.6 206 53.9
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 7.8e-50 201.8 206 52.4
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 1.0e-49 201.4 187 61.0
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 1.3e-49 201.1 192 58.3
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 3.9e-49 199.5 188 59.6
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 6.6e-49 198.7 184 60.3
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 7.3e-48 195.3 192 56.2
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 3.6e-47 193.0 193 56.5
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 3.4e-45 186.4 193 54.4
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 8.3e-44 181.8 196 51.0
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 1.4e-43 181.0 189 53.4
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 5.6e-40 169.1 327 41.0
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 3.6e-39 166.4 193 51.8
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 4.0e-38 162.9 193 50.8
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 2.0e-37 160.6 187 53.5
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 2.3e-33 147.1 268 36.9
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 2.1e-31 140.6 198 45.5
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 1.6e-26 124.4 131 54.2
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 4.6e-26 122.9 129 55.0
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 1.0e-25 121.7 125 55.2
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 3.0e-25 120.2 125 56.0
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 3.0e-25 120.2 125 56.0
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 3.9e-25 119.8 145 49.0
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 6.6e-25 119.0 125 56.0
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 2.5e-24 117.1 125 54.4
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 7.3e-24 115.5 161 46.0
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 7.3e-24 115.5 129 52.7
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-22 111.7 124 53.2
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 3.1e-22 110.2 128 50.8
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 5.3e-22 109.4 68 67.6
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 3.4e-21 106.7 118 52.5
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 5.8e-21 105.9 132 47.7
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 5.4e-19 99.4 124 46.0
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 8.7e-17 92.0 164 36.6
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 9.6e-16 88.6 97 49.5
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 2.1e-15 87.4 136 41.2
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 2.2e-12 77.4 44 84.1
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.5e-10 70.1 45 73.3
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 4.3e-08 63.2 155 32.9


User provided reference genes

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