Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012864.4 Olea europaea HOM05D007034 ORTHO05D008665 0.0e+00 2419.8 1257 100.0
SGA_v2.0_scaffold37G14662 Striga asiatica HOM05D007034 ORTHO05D008665 0.0e+00 1242.3 1121 58.1
SalBow7G3686 Salvia bowleyana HOM05D007034 ORTHO05D008665 0.0e+00 1236.9 1136 58.7
Cc04_g05570 Coffea canephora HOM05D007034 ORTHO05D008665 0.0e+00 1129.4 1114 54.9
Actinidia18277 Actinidia chinensis HOM05D007034 ORTHO05D008665 0.0e+00 1119.0 1142 53.3
PGSC0003DMG400014226 Solanum tuberosum HOM05D007034 ORTHO05D008665 0.0e+00 1118.2 1121 53.3
Migut.I00651 Erythranthe guttata HOM05D007034 ORTHO05D008665 0.0e+00 1114.4 920 62.0
CAN.G1008.36 Capsicum annuum HOM05D007034 ORTHO05D008665 0.0e+00 1111.7 1121 53.3
Dinv13693 Davidia involucrata HOM05D007034 ORTHO05D008665 0.0e+00 1105.1 992 58.1
Rhsim08G0200400 Rhododendron simsii HOM05D007034 ORTHO05D008665 0.0e+00 1102.8 1110 53.5
Solyc03g117960.4 Solanum lycopersicum HOM05D007034 ORTHO05D008665 2.4e-304 1049.3 1093 52.0
Prupe.5G138100 Prunus persica HOM05D007034 ORTHO05D008665 4.4e-298 1028.5 1110 50.4
TAR374G0491 Trochodendron aralioides HOM05D007034 ORTHO05D008665 1.8e-296 1023.1 1184 48.3
Haze_19381 Corylus avellana HOM05D007034 ORTHO05D008665 1.0e-294 1017.3 1109 51.2
GSVIVG01014061001 Vitis vinifera HOM05D007034 ORTHO05D008665 5.7e-290 1001.5 1071 50.3
Ciclev10030559m.g Citrus clementina HOM05D007034 ORTHO05D008665 3.1e-288 995.7 1169 48.1
HanXRQChr05g0154511 Helianthus annuus HOM05D007034 ORTHO05D008665 3.1e-288 995.7 1103 50.0
RcHm_v2.0_Chr7g0188231 Rosa chinensis HOM05D007034 ORTHO05D008665 3.1e-288 995.7 1133 49.1
MD06G1128300 Malus domestica HOM05D007034 ORTHO05D008665 1.3e-286 990.3 1108 49.5
DCAR_025620 Daucus carota HOM05D007034 ORTHO05D008665 5.5e-285 984.9 1169 49.0
Gohir.D07G050000 Gossypium hirsutum HOM05D007034 ORTHO05D008665 7.2e-285 984.6 1163 47.7
Thecc.03G143600 Theobroma cacao HOM05D007034 ORTHO05D008665 3.6e-284 982.2 1172 47.3
Lsat_1_v5_gn_5_9280 Lactuca sativa HOM05D007034 ORTHO05D008665 2.3e-283 979.5 1126 49.1
ECA246G4515 Erigeron canadensis HOM05D007034 ORTHO05D008665 2.4e-280 969.5 1071 50.6
Sopen03g036860 Solanum pennellii HOM05D007034 ORTHO05D008665 4.5e-279 965.3 957 53.5
FAN08G2641 Fragaria x ananassa HOM05D007034 ORTHO05D008665 5.0e-278 961.8 1130 48.3
Lj5C84G9 Lonicera japonica HOM05D007034 ORTHO05D008665 5.0e-278 961.8 1109 49.1
Potri.012G111800 Populus trichocarpa HOM05D007034 ORTHO05D008665 5.0e-278 961.8 1179 46.8
Gorai.001G053100 Gossypium raimondii HOM05D007034 ORTHO05D008665 7.3e-277 958.0 1172 47.1
Sabra12G0081400 Salix brachista HOM05D007034 ORTHO05D008665 3.0e-275 952.6 1141 48.0
Gohir.A07G045600 Gossypium hirsutum HOM05D007034 ORTHO05D008665 2.6e-274 949.5 1171 46.7
Duzib205G0091 Durio zibethinus HOM05D007034 ORTHO05D008665 1.3e-273 947.2 1164 46.2
Nn3g16191 Nelumbo nucifera HOM05D007034 ORTHO05D008665 3.7e-273 945.7 1156 46.0
CANSAT56G2345 Cannabis sativa HOM05D007034 ORTHO05D008665 4.9e-273 945.3 1079 48.7
Nitab4.5_0009037g0010 Nicotiana tabacum HOM05D007034 ORTHO05D008665 4.9e-273 945.3 795 60.1
PSO017G2510 Papaver somniferum HOM05D007034 ORTHO05D008665 9.2e-272 941.0 1092 48.6
Ca_16833_v3 Cicer arietinum L. HOM05D007034 ORTHO05D008665 1.1e-269 934.1 1065 48.9
Ah.15g089920 Amaranthus hybridus HOM05D007034 ORTHO05D008665 2.3e-267 926.4 1093 48.9
PSO017G4759 Papaver somniferum HOM05D007034 ORTHO05D008665 4.4e-266 922.2 1086 48.0
Nitab4.5_0000976g0250 Nicotiana tabacum HOM05D007034 ORTHO05D008665 9.8e-266 921.0 781 60.1
Glyma.08G005800 Glycine max HOM05D007034 ORTHO05D008665 1.3e-265 920.6 1091 46.9
Psat7g040600 Pisum sativum HOM05D007034 ORTHO05D008665 2.2e-265 919.8 1083 47.9
TPR.G12786 Trifolium pratense HOM05D007034 ORTHO05D008665 4.1e-264 915.6 1057 49.4
Aqoxy5G02954 Aquilegia oxysepala HOM05D007034 ORTHO05D008665 5.4e-264 915.2 1116 46.8
THA.LOC104818293 Tarenaya hassleriana HOM05D007034 ORTHO05D008665 7.8e-263 911.4 1146 45.8
EL10Ac7g17117 Beta vulgaris HOM05D007034 ORTHO05D008665 5.0e-262 908.7 1132 47.3
Medtr8g095490 Medicago truncatula HOM05D007034 ORTHO05D008665 1.9e-261 906.7 1110 46.7
TWI23G0512 Tripterygium wilfordii HOM05D007034 ORTHO05D008665 8.1e-260 901.4 1143 45.7
arahy.Tifrunner.gnm1.ann1.XWK03B Arachis hypogaea HOM05D007034 ORTHO05D008665 3.7e-257 892.5 1122 46.0
Lj4g0024388 Lotus japonicus HOM05D007034 ORTHO05D008665 3.5e-255 885.9 1097 46.5
BraA02t04915Z Brassica rapa HOM05D007034 ORTHO05D008665 4.6e-255 885.6 1086 47.5
BolC2t06271H Brassica oleracea HOM05D007034 ORTHO05D008665 1.7e-254 883.6 1082 47.8
C02p03100 Brassica napus HOM05D007034 ORTHO05D008665 2.3e-254 883.2 1082 47.7
arahy.Tifrunner.gnm1.ann1.FYEN8G Arachis hypogaea HOM05D007034 ORTHO05D008665 1.1e-253 880.9 1142 45.2
VMungo0251G1097 Vigna mungo HOM05D007034 ORTHO05D008665 1.2e-252 877.5 1092 46.5
AL6G17700 Arabidopsis lyrata HOM05D007034 ORTHO05D008665 1.1e-251 874.4 1122 45.9
Lalb_Chr07g0183941 Lupinus albus HOM05D007034 ORTHO05D008665 1.1e-251 874.4 1187 43.7
BcaC03g13189 Brassica carinata HOM05D007034 ORTHO05D008665 1.8e-251 873.6 1082 47.5
Carub.0006s0637 Capsella rubella HOM05D007034 ORTHO05D008665 2.0e-250 870.2 1123 45.2
Manes.06G128800 Manihot esculenta HOM05D007034 ORTHO05D008665 2.6e-250 869.8 1149 45.7
Sc10g0005150 Simmondsia chinensis HOM05D007034 ORTHO05D008665 4.4e-250 869.0 764 58.5
BcaB05g21618 Brassica carinata HOM05D007034 ORTHO05D008665 6.4e-249 865.1 1114 45.8
Aa31LG3G18970 Aethionema arabicum HOM05D007034 ORTHO05D008665 2.1e-247 860.1 1128 43.5
Eucgr.G00023 Eucalyptus grandis HOM05D007034 ORTHO05D008665 9.6e-245 851.3 1130 44.7
PGR042G1727 Punica granatum HOM05D007034 ORTHO05D008665 1.2e-244 850.9 1103 45.2
Thhalv10012509m.g Eutrema salsugineum HOM05D007034 ORTHO05D008665 4.0e-243 845.9 1136 44.1
vmacro19093 Vaccinium macrocarpon HOM05D007034 ORTHO05D008665 1.3e-241 840.9 795 55.5
Sp6g35470 Schrenkiella parvula HOM05D007034 ORTHO05D008665 6.4e-241 838.6 1096 44.6
BcaB05g21619 Brassica carinata HOM05D007034 ORTHO05D008665 7.1e-240 835.1 1069 46.9
AUR62029782 Chenopodium quinoa HOM05D007034 ORTHO05D008665 1.1e-237 827.8 1080 44.8
FvH4_5g10030 Fragaria vesca HOM05D007034 ORTHO05D008665 6.2e-236 822.0 788 54.7
Atru.BG.50.p Acer truncatum HOM05D007034 ORTHO05D008665 1.8e-230 803.9 766 57.4
QL10p035731 Quercus lobata HOM05D007034 ORTHO05D008665 3.9e-230 802.7 842 52.1
Phvul.002G279600 Phaseolus vulgaris HOM05D007034 ORTHO05D008665 6.7e-230 802.0 1071 43.9
HPP92_006434 Vanilla planifolia HOM05D007034 ORTHO05D008665 8.7e-222 775.0 1047 43.4
MBI11_g45190_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 2.8e-220 770.0 918 47.5
FAN18G0345 Fragaria x ananassa HOM05D007034 ORTHO05D008665 1.4e-219 767.7 716 55.6
Os04g0403400 Oryza sativa ssp. japonica HOM05D007034 ORTHO05D008665 7.9e-215 751.9 965 45.5
ATR0582G190 Amborella trichopoda HOM05D007034 ORTHO05D008665 1.1e-213 748.0 774 50.0
Zm00001eb084530 Zea mays HOM05D007034 ORTHO05D008665 2.8e-212 743.4 977 44.5
Peaxi162Scf00314g00825 Petunia axillaris HOM05D007034 ORTHO05D008665 1.1e-208 731.5 636 59.7
MBI11_g13136_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 4.3e-205 719.5 764 51.3
FAN04G0206 Fragaria x ananassa HOM05D007034 ORTHO05D008665 1.4e-198 698.0 1040 42.3
AT5G07400 Arabidopsis thaliana HOM05D007034 ORTHO05D008665 2.9e-185 653.7 839 45.1
AagrBONN_evm.TU.Sc2ySwM_340.151 Anthoceros agrestis HOM05D007034 ORTHO05D008665 2.4e-155 554.3 1040 36.7
SMO139G0138 Selaginella moellendorffii HOM05D007034 ORTHO05D008665 6.2e-143 513.1 1021 34.6
CARHR205750 Cardamine hirsuta HOM05D007034 ORTHO05D008665 8.1e-135 486.1 563 48.3
CBR_g36305 Chara braunii HOM05D007034 ORTHO05D008665 9.6e-120 436.0 824 34.2
COL.COLO4_37288 Corchorus olitorius HOM05D007034 ORTHO05D008665 8.7e-113 412.9 718 38.4
Cpa.g.sc13.204 Carica papaya HOM05D007034 ORTHO05D008665 1.4e-110 405.6 405 53.3
MD09G1063600 Malus domestica HOM05D007034 ORTHO05D008665 2.0e-109 401.7 572 42.8
Glyma.05G198600 Glycine max HOM05D007034 ORTHO05D008665 8.2e-95 353.2 1129 29.4
Cpa.g.sc13.203 Carica papaya HOM05D007034 ORTHO05D008665 6.1e-90 337.0 651 35.2
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 5.9e-69 267.3 501 35.7
CSS0039283 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 5.4e-46 191.0 165 63.0
MBI11_g40919_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 6.6e-44 184.1 180 58.3
CSS0021292 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 7.3e-43 180.6 165 59.4
QL10p035719 Quercus lobata HOM05D007034 ORTHO05D008665 2.1e-42 179.1 166 59.6
COL.COLO4_37289 Corchorus olitorius HOM05D000001 ORTHO05D000003 4.0e-41 174.9 176 53.4
SEGI_36690 Sequoiadendron giganteum HOM05D007034 ORTHO05D008665 3.2e-38 165.2 127 57.5
Oeu039957.1 Olea europaea HOM05D013215 ORTHO05D013431 6.6e-36 157.5 89 88.8
Oeu054470.1 Olea europaea HOM05D001574 ORTHO05D000708 4.3e-35 154.8 89 86.5
Oeu001992.1 Olea europaea HOM05D013215 ORTHO05D013431 7.3e-35 154.1 89 86.5
CSS0014219 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 4.7e-34 151.4 98 69.4
Peaxi162Scf00314g00824 Petunia axillaris HOM05D007034 ORTHO05D008665 4.7e-34 151.4 93 72.0
Cpa.g.c43582 Carica papaya HOM05D007034 ORTHO05D008665 2.3e-33 149.1 136 56.6
Oeu053272.1 Olea europaea HOM05D013215 ORTHO05D013431 2.3e-28 132.5 78 84.6
TAR622G0405 Trochodendron aralioides HOM05D001184 ORTHO05D007940 1.9e-27 129.4 383 28.7
TAR622G0913 Trochodendron aralioides HOM05D007034 ORTHO05D008665 5.6e-27 127.9 302 32.5
Glyma.17G184700 Glycine max HOM05D007034 ORTHO05D006448 7.6e-24 117.5 73 65.8
HanXRQChr10g0301151 Helianthus annuus HOM05D007034 ORTHO05D008665 2.2e-23 115.9 73 67.1
Oeu043541.1 Olea europaea HOM05D013215 ORTHO05D008665 2.4e-22 112.5 63 85.7
Oeu030392.1 Olea europaea HOM05D013215 ORTHO05D013431 7.1e-22 110.9 71 78.9
Oeu042517.1 Olea europaea HOM05D013215 ORTHO05D013431 2.7e-21 109.0 71 77.5
Oeu053120.1 Olea europaea HOM05D013215 ORTHO05D013431 4.6e-21 108.2 111 51.4
Actinidia25500 Actinidia chinensis HOM05D007034 ORTHO05D008665 7.8e-21 107.5 92 57.6
Oeu014650.1 Olea europaea HOM05D013215 ORTHO05D013431 1.3e-20 106.7 71 76.1
CSS0025577 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 1.7e-20 106.3 70 71.4
CSS0045322 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 3.9e-20 105.1 70 70.0
Oeu038403.1 Olea europaea HOM05D013215 ORTHO05D013431 4.7e-18 98.2 71 71.8
MBI11_g13135_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 6.2e-18 97.8 206 32.5
Oeu042702.4 Olea europaea HOM05D000038 ORTHO05D000423 8.1e-18 97.4 73 68.5
Oeu029893.1 Olea europaea HOM05D001574 ORTHO05D000708 1.4e-17 96.7 71 67.6
Oeu048042.1 Olea europaea HOM05D013215 ORTHO05D290449 3.4e-16 92.0 60 78.3
Lsat_1_v5_gn_2_45281 Lactuca sativa HOM05D007034 ORTHO05D008665 8.4e-15 87.4 65 61.5
Atru.chr6.1955 Acer truncatum HOM05D007034 ORTHO05D008665 1.4e-14 86.7 148 37.2
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 6.0e-13 81.3 53 79.2
Oeu058098.1 Olea europaea HOM05D013215 ORTHO05D013431 6.0e-13 81.3 74 56.8
Zm00001eb094900 Zea mays HOM05D000085 ORTHO05D014542 6.0e-13 81.3 71 52.1
Oeu026911.1 Olea europaea HOM05D002393 ORTHO05D013431 9.6e-11 73.9 59 64.4
CSS0041671 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 1.3e-10 73.6 60 66.7
Oeu056712.1 Olea europaea HOM05D002002 ORTHO05D013431 1.3e-10 73.6 62 59.7
Oeu050829.1 Olea europaea HOM05D001574 ORTHO05D000708 2.1e-10 72.8 48 75.0
Oeu061123.1 Olea europaea HOM05D001574 ORTHO05D000708 4.8e-10 71.6 48 70.8
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 6.2e-10 71.2 231 28.6
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 5.3e-09 68.2 220 30.5
Oeu047756.1 Olea europaea HOM05D013215 ORTHO05D013431 6.9e-09 67.8 62 58.1
AUR62022012 Chenopodium quinoa HOM05D006350 ORTHO05D007850 1.2e-08 67.0 223 30.9
Mapoly0129s0047 Marchantia polymorpha HOM05D006350 ORTHO05D007850 1.2e-08 67.0 238 25.6
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 4.4e-08 65.1 226 28.3
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 1.7e-07 63.2 223 30.5
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 1.7e-07 63.2 231 26.0
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 2.2e-07 62.8 232 26.3
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 2.2e-07 62.8 266 26.3
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 2.2e-07 62.8 218 26.1
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 3.8e-07 62.0 226 26.1
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 3.8e-07 62.0 243 25.9
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 3.8e-07 62.0 243 26.3
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 6.4e-07 61.2 224 24.1
Lsat_1_v5_gn_6_20981 Lactuca sativa HOM05D000442 ORTHO05D001242 6.4e-07 61.2 52 53.8
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 6.4e-07 61.2 235 26.4
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 8.4e-07 60.8 226 25.2
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 8.4e-07 60.8 229 27.1
ATR0109G008 Amborella trichopoda HOM05D006350 ORTHO05D007850 1.1e-06 60.5 324 21.3
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 1.1e-06 60.5 269 25.7
Psat3g152760 Pisum sativum HOM05D006350 ORTHO05D007850 1.1e-06 60.5 229 25.8
Sed0019871 Sechium edule HOM05D006350 ORTHO05D007850 1.1e-06 60.5 200 26.0
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 1.1e-06 60.5 228 25.9
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 1.4e-06 60.1 224 23.7
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 1.4e-06 60.1 219 25.6
TPR.G10193 Trifolium pratense HOM05D006350 ORTHO05D007850 1.4e-06 60.1 228 25.4
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 1.9e-06 59.7 235 26.0
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 2.4e-06 59.3 226 27.9
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.4e-06 59.3 226 25.7
Pp3c10_12100 Physcomitrium patens HOM05D006350 ORTHO05D007850 2.4e-06 59.3 236 22.9
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 3.2e-06 58.9 238 25.2
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 3.2e-06 58.9 229 25.3
Oeu056882.1 Olea europaea HOM05D001574 ORTHO05D000708 3.2e-06 58.9 64 54.7
Sc05g0008900 Simmondsia chinensis HOM05D006350 ORTHO05D007850 3.2e-06 58.9 228 25.0
Dinv17832 Davidia involucrata HOM05D006350 ORTHO05D007850 4.2e-06 58.5 226 24.3
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 4.2e-06 58.5 226 25.2
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 4.2e-06 58.5 314 24.8
PGSC0003DMG400024073 Solanum tuberosum HOM05D006350 ORTHO05D007850 4.2e-06 58.5 238 25.6
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 4.2e-06 58.5 221 25.8
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 5.4e-06 58.2 356 23.6
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 5.4e-06 58.2 224 25.9
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 5.4e-06 58.2 241 24.1
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 5.4e-06 58.2 242 24.0
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 7.1e-06 57.8 228 25.0
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 7.1e-06 57.8 247 25.9
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 7.1e-06 57.8 228 25.9
SMO117G0269 Selaginella moellendorffii HOM05D006350 ORTHO05D007850 7.1e-06 57.8 228 24.6
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 7.1e-06 57.8 238 25.6


User provided reference genes

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