Gene: Solyc03g117960.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g117960.4
  • Transcript Identifier Solyc03g117960.4.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 61384160-61393898 : negative

Gene Family Information

  • ID HOM05D007034
  • #Genes/#Species 114/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g117960.4.1
  • uniprot A0A3Q7FVB3
  • gene_id Solyc03g117960

Descriptions

  • Description Forkhead-associated domain-containing protein / FHA domain-containing protein (AHRD V3.3 *** A0A2U1Q1M6_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000012
IBA
GOA Databasesingle strand break repair
GO:0006302
IBA
GOA Databasedouble-strand break repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0017005
IBA
GOA Database3'-tyrosyl-DNA phosphodiesterase activity
GO:0003690
IBA
GOA Databasedouble-stranded DNA binding
GO:0003697
IBA
GOA Databasesingle-stranded DNA binding
GO:0008081
IEA
GOA Databasephosphoric diester hydrolase activity
GO:0008081
IEA
InterProphosphoric diester hydrolase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016818
IEA
GOA Databasehydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016818
IEA
InterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0005515
IEA
InterProprotein binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008984 SMAD/FHA domain superfamily
IPR000253 Forkhead-associated (FHA) domain
IPR010347 Tyrosyl-DNA phosphodiesterase I
IPR014905 HIRAN domain
Mapman id Description
35.1 not assigned.annotated