Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010681.1 Olea europaea HOM05D000216 ORTHO05D000634 4.6e-79 297.7 142 100.0
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 2.8e-44 182.2 186 53.8
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.5e-42 176.4 186 52.7
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.0e-42 176.0 186 52.7
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 2.0e-42 176.0 186 52.7
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 2.0e-42 176.0 186 52.7
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-41 172.9 186 52.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 3.8e-41 171.8 186 49.5
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 5.0e-41 171.4 185 52.4
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 6.5e-41 171.0 186 51.1
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.9e-40 169.5 186 49.5
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.5e-40 169.1 186 48.9
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 3.2e-40 168.7 186 48.9
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 3.2e-40 168.7 186 48.9
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 3.2e-40 168.7 186 48.9
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 3.2e-40 168.7 186 48.9
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 7.2e-40 167.5 190 50.0
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 3.6e-39 165.2 186 50.0
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 3.6e-39 165.2 190 50.0
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 4.7e-39 164.9 191 49.2
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.4e-38 163.3 186 48.9
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 5.2e-38 161.4 190 48.9
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.0e-37 159.5 190 47.9
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 2.0e-37 159.5 190 47.9
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-37 159.5 190 47.9
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-37 159.5 190 47.9
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-37 159.1 186 48.9
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 7.4e-37 157.5 190 46.3
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.2e-36 156.0 190 47.4
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 3.7e-36 155.2 186 46.8
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.4e-35 153.3 190 46.8
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.8e-35 152.9 175 51.4
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.8e-35 152.9 181 48.6
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.4e-35 152.5 186 44.6
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 3.5e-34 148.7 188 45.2
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 4.5e-34 148.3 191 47.1
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 7.7e-34 147.5 188 46.3
CAN.G511.9 Capsicum annuum HOM05D000216 ORTHO05D000634 8.5e-33 144.1 86 79.1
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 8.5e-33 144.1 186 47.3
Atru.chr6.1615 Acer truncatum HOM05D000216 ORTHO05D000634 4.7e-31 138.3 86 69.8
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 2.3e-30 136.0 150 50.7
Gohir.D12G094332 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.2e-30 134.8 152 51.3
Gorai.008G102500 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.7e-30 134.4 139 54.0
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 1.7e-28 129.8 166 48.8
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 2.8e-28 129.0 194 40.7
Hund04025 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.4e-27 125.9 85 69.4
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 3.1e-27 125.6 84 73.8
Migut.K00966 Erythranthe guttata HOM05D000216 ORTHO05D000634 9.1e-27 124.0 86 69.8
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 9.1e-27 124.0 88 68.2
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.5e-26 121.7 88 67.0
Gohir.D01G206650 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.9e-26 121.3 132 53.0
Lj1g0027665 Lotus japonicus HOM05D000216 ORTHO05D000634 5.9e-26 121.3 88 67.0
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 7.7e-26 120.9 88 65.9
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 1.3e-25 120.2 187 41.2
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 1.3e-25 120.2 187 41.2
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 1.3e-25 120.2 187 41.2
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 1.3e-25 120.2 187 41.2
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 1.3e-25 120.2 187 41.2
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 5.0e-25 118.2 90 66.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 4.2e-24 115.2 187 41.2
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.2e-24 114.4 79 69.6
GSVIVG01030958001 Vitis vinifera HOM05D000216 ORTHO05D000634 6.1e-23 111.3 66 75.8
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.5e-18 95.1 97 57.7
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 4.5e-18 95.1 147 42.9
Glyma.02G221400 Glycine max HOM05D000216 ORTHO05D000634 3.8e-17 92.0 149 40.3
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 9.5e-16 87.4 134 41.0
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-15 86.7 134 41.8
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-15 86.7 134 41.8
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-15 86.7 134 41.8
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-15 86.7 134 41.8
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.8e-14 83.2 180 34.4
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 2.3e-14 82.8 128 43.0
Solyc05g020010.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 3.0e-14 82.4 52 78.8
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 6.8e-14 81.3 50 70.0
Gorai.002G075300 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.7e-13 78.2 48 75.0
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 6.3e-12 74.7 99 47.5
Lalb_Chr23g0274571 Lupinus albus HOM05D000216 ORTHO05D000634 4.1e-11 72.0 51 70.6
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.0e-09 67.4 142 38.0
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 1.7e-09 66.6 33 93.9
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.7e-09 66.6 81 48.1
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.7e-09 66.6 46 67.4
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 1.7e-09 66.6 33 93.9
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.7e-09 66.6 33 93.9
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.9e-09 65.9 33 93.9
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 3.8e-09 65.5 49 61.2
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.0e-09 65.1 33 90.9
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.0e-09 65.1 33 90.9
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 5.0e-09 65.1 33 90.9
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 5.0e-09 65.1 33 90.9
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 5.0e-09 65.1 33 90.9
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 5.0e-09 65.1 33 90.9
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 6.6e-09 64.7 46 65.2
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 6.6e-09 64.7 81 46.9
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 8.6e-09 64.3 127 37.0
Lalb_Chr06g0173001 Lupinus albus HOM05D000216 ORTHO05D000634 8.6e-09 64.3 50 64.0
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 8.6e-09 64.3 95 42.1
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.1e-08 63.9 33 87.9
Migut.D01414 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.5e-08 63.5 32 93.8
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.5e-08 63.5 50 66.0
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 1.5e-08 63.5 33 87.9
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.5e-08 63.5 33 90.9
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 2.5e-08 62.8 32 93.8
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 2.5e-08 62.8 32 93.8
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.3e-08 62.4 33 84.8
Solyc07g021290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 4.3e-08 62.0 33 84.8
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 7.3e-08 61.2 33 87.9
Lalb_Chr06g0173101 Lupinus albus HOM05D000216 ORTHO05D000634 7.3e-08 61.2 50 62.0
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 9.5e-08 60.8 33 81.8
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 9.5e-08 60.8 33 84.8
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.6e-07 60.1 33 84.8
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.1e-07 59.7 33 84.8
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.1e-07 59.7 33 84.8
HanXRQChr00c0988g0578131 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-07 59.7 47 63.8
AUR62041877 Chenopodium quinoa HOM05D000216 ORTHO05D000634 6.1e-07 58.2 31 90.3
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 1.8e-06 56.6 32 81.2
Aa31csc39G140 Aethionema arabicum HOM05D000216 ORTHO05D000634 3.0e-06 55.8 44 56.8
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 8.9e-06 54.3 27 92.6


User provided reference genes

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