Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu003059.1 Olea europaea HOM05D004511 ORTHO05D005348 2.7e-119 432.2 242 100.0
Oeu003044.1 Olea europaea HOM05D004511 ORTHO05D005348 3.4e-90 335.5 226 80.1
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 9.0e-59 231.1 250 55.6
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 3.1e-51 206.1 250 50.0
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 4.1e-51 205.7 249 49.4
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 4.1e-51 205.7 250 49.2
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 3.4e-50 202.6 272 47.4
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 5.0e-49 198.7 250 48.0
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 6.5e-49 198.4 250 48.4
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 1.1e-48 197.6 250 47.2
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.4e-48 197.2 250 48.4
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 4.2e-48 195.7 250 47.6
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 4.2e-48 195.7 249 47.4
CSS0049524 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 7.2e-48 194.9 250 47.6
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 9.4e-48 194.5 250 45.2
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 1.2e-47 194.1 250 45.6
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 1.2e-47 194.1 250 45.6
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 1.6e-47 193.7 250 45.6
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 1.6e-47 193.7 250 45.6
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 3.6e-47 192.6 250 46.4
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 3.6e-47 192.6 250 46.8
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 4.6e-47 192.2 249 47.4
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 4.6e-47 192.2 249 47.4
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 7.9e-47 191.4 250 47.2
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 1.0e-46 191.0 249 46.6
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 1.0e-46 191.0 250 47.2
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 1.4e-46 190.7 249 46.6
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 1.8e-46 190.3 250 45.6
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 1.8e-46 190.3 250 46.0
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 2.3e-46 189.9 250 44.8
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 2.3e-46 189.9 249 47.8
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 3.9e-46 189.1 251 45.4
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 6.7e-46 188.3 249 47.0
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 6.7e-46 188.3 250 44.4
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 8.8e-46 188.0 250 44.4
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 1.1e-45 187.6 249 47.0
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 1.5e-45 187.2 277 41.5
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 2.0e-45 186.8 249 45.8
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 2.0e-45 186.8 249 46.2
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 3.3e-45 186.0 250 44.4
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 4.3e-45 185.7 249 45.4
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 4.3e-45 185.7 250 44.4
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 7.4e-45 184.9 249 46.2
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 9.7e-45 184.5 250 43.6
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 1.3e-44 184.1 250 44.8
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 3.7e-44 182.6 212 47.6
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 6.3e-44 181.8 251 43.8
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 6.3e-44 181.8 249 45.0
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 8.2e-44 181.4 250 44.8
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 1.1e-43 181.0 212 49.5
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 1.1e-43 181.0 250 44.0
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 1.1e-43 181.0 250 44.8
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 1.4e-43 180.6 251 45.4
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 1.8e-43 180.3 215 48.8
Oeu003036.1 Olea europaea HOM05D004511 ORTHO05D005348 4.1e-43 179.1 280 46.4
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 4.1e-43 179.1 252 44.4
Cpa.g.sc59.13 Carica papaya HOM05D004511 ORTHO05D005348 5.3e-43 178.7 250 44.0
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 5.9e-42 175.3 250 44.4
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 7.7e-42 174.9 249 44.6
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 3.8e-41 172.6 212 46.7
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 3.8e-41 172.6 252 42.9
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 3.8e-41 172.6 212 46.7
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 5.0e-41 172.2 250 43.2
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 6.5e-41 171.8 249 43.4
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 6.5e-41 171.8 250 43.2
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 1.4e-40 170.6 250 43.6
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.9e-40 170.2 250 42.4
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 2.5e-40 169.9 252 42.5
Haze_11476 Corylus avellana HOM05D004511 ORTHO05D005348 3.2e-40 169.5 301 38.2
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 5.5e-40 168.7 251 43.8
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 7.2e-40 168.3 251 42.6
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 9.4e-40 167.9 250 42.8
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 2.1e-39 166.8 250 43.6
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 1.0e-38 164.5 212 44.8
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 3.0e-38 162.9 251 42.6
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 6.7e-38 161.8 251 41.8
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 2.0e-37 160.2 250 39.2
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 7.4e-37 158.3 212 42.5
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 6.3e-36 155.2 251 41.0
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 6.3e-36 155.2 290 39.0
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 8.2e-36 154.8 213 44.6
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 8.2e-36 154.8 213 44.6
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 1.1e-35 154.5 251 41.0
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 1.4e-35 154.1 251 40.6
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 1.8e-35 153.7 251 40.6
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 2.4e-35 153.3 251 41.8
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 4.1e-35 152.5 213 44.1
Glyma.20G073400 Glycine max HOM05D004511 ORTHO05D005348 4.1e-35 152.5 237 41.8
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 9.1e-35 151.4 213 43.7
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.5e-34 149.4 250 38.8
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 1.7e-33 147.1 213 41.8
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 5.0e-33 145.6 212 40.6
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 3.0e-30 136.3 213 39.4
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 4.4e-29 132.5 215 36.3
TPR.G17618 Trifolium pratense HOM05D004511 ORTHO05D005348 1.3e-28 131.0 283 34.3
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 1.9e-24 117.1 217 32.3
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 3.2e-24 116.3 210 38.1
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 7.2e-24 115.2 216 32.9
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 9.4e-24 114.8 96 60.4
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 9.4e-24 114.8 96 60.4
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 2.1e-23 113.6 217 33.6
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 5.4e-19 99.0 212 29.7
unitig_747.g21672 Utricularia gibba HOM05D004511 ORTHO05D005348 7.2e-16 88.6 121 43.0
Psat3g154520 Pisum sativum HOM05D004511 ORTHO05D005348 2.7e-15 86.7 240 31.7
SEGI_15545 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 1.8e-14 84.0 156 33.3
Hund00476 Selenicereus undatus HOM05D004511 ORTHO05D005348 9.2e-11 71.6 60 63.3
CDE08G0287 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 3.5e-10 69.7 131 33.6


User provided reference genes

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