Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 6.7e-93 344.0 170 100.0
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 8.0e-70 267.3 193 70.5
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 9.8e-44 180.6 142 62.7
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 4.3e-39 165.2 138 60.1
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 2.2e-35 152.9 138 56.5
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 2.2e-35 152.9 138 56.5
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 3.7e-35 152.1 137 55.5
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 3.7e-35 152.1 148 53.4
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 6.4e-35 151.4 148 52.7
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 1.1e-34 150.6 138 55.8
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 1.4e-34 150.2 136 58.1
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 1.9e-34 149.8 143 50.3
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 5.4e-34 148.3 138 56.5
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 1.2e-33 147.1 94 69.1
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 1.2e-33 147.1 125 58.4
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 1.2e-33 147.1 138 55.8
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 1.2e-33 147.1 136 54.4
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 1.6e-33 146.7 155 48.4
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 1.6e-33 146.7 143 55.2
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 2.1e-33 146.4 136 57.4
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 4.6e-33 145.2 145 53.8
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 4.6e-33 145.2 139 55.4
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 4.6e-33 145.2 140 54.3
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 6.0e-33 144.8 135 54.1
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 7.8e-33 144.4 145 53.8
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 7.8e-33 144.4 116 62.1
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 7.8e-33 144.4 101 64.4
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 1.0e-32 144.1 150 51.3
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 1.0e-32 144.1 135 54.1
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 1.0e-32 144.1 136 52.2
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 1.3e-32 143.7 135 53.3
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 1.7e-32 143.3 115 61.7
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 2.3e-32 142.9 114 60.5
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 2.3e-32 142.9 138 50.7
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 3.0e-32 142.5 175 47.4
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 3.0e-32 142.5 138 50.7
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 3.9e-32 142.1 163 49.7
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 3.9e-32 142.1 140 53.6
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 6.6e-32 141.4 135 53.3
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 6.6e-32 141.4 135 52.6
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 8.6e-32 141.0 137 51.8
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 1.1e-31 140.6 133 54.1
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.1e-31 140.6 95 67.4
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 1.1e-31 140.6 95 67.4
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 1.1e-31 140.6 137 52.6
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.9e-31 139.8 135 53.3
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 1.9e-31 139.8 132 52.3
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 3.3e-31 139.0 123 55.3
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 3.3e-31 139.0 95 66.3
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 3.3e-31 139.0 94 64.9
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 4.3e-31 138.7 140 52.1
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 5.6e-31 138.3 136 54.4
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 5.6e-31 138.3 145 50.3
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 5.6e-31 138.3 94 66.0
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 5.6e-31 138.3 94 66.0
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 5.6e-31 138.3 140 50.7
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 5.6e-31 138.3 135 51.9
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 7.3e-31 137.9 117 57.3
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 1.6e-30 136.7 128 55.5
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 1.6e-30 136.7 128 55.5
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 2.1e-30 136.3 138 52.2
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 2.8e-30 136.0 98 62.2
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 2.8e-30 136.0 150 50.0
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 4.7e-30 135.2 158 48.1
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 6.2e-30 134.8 103 62.1
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 6.2e-30 134.8 108 61.1
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 1.8e-29 133.3 98 62.2
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 1.8e-29 133.3 136 48.5
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 5.2e-29 131.7 94 63.8
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 5.2e-29 131.7 140 51.4
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 5.2e-29 131.7 156 45.5
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 2.6e-28 129.4 139 47.5
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 4.4e-28 128.6 136 49.3
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 4.4e-28 128.6 136 49.3
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 4.4e-28 128.6 115 55.7
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 7.6e-28 127.9 136 51.5
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 1.3e-27 127.1 140 47.9
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 2.2e-27 126.3 121 51.2
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 2.2e-27 126.3 100 60.0
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 5.4e-26 121.7 135 47.4
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 5.4e-26 121.7 78 66.7
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 9.2e-26 120.9 88 63.6
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 1.6e-25 120.2 133 45.9
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 1.6e-25 120.2 138 44.2
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 5.1e-24 115.2 134 44.0
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 5.1e-24 115.2 134 44.0
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 5.1e-24 115.2 134 44.0
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 5.1e-24 115.2 75 66.7
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 6.6e-24 114.8 81 63.0
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 6.6e-24 114.8 72 68.1
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 8.6e-24 114.4 81 61.7
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 1.1e-23 114.0 116 54.3
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 1.9e-23 113.2 133 43.6
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.9e-23 113.2 93 57.0
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 1.9e-23 113.2 93 57.0
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 3.6e-22 109.0 135 47.4
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 6.9e-21 104.8 148 39.2
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 4.4e-20 102.1 79 58.2
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 7.6e-20 101.3 135 43.0
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 6.4e-19 98.2 82 57.3
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 2.4e-18 96.3 59 72.9
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 4.2e-18 95.5 78 56.4
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 1.0e-16 90.9 98 48.0
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 8.1e-14 81.3 69 56.5
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 1.4e-13 80.5 89 44.9
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.4e-13 80.5 69 55.1
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 7.6e-12 74.7 93 46.2
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 7.9e-09 64.7 159 33.3


User provided reference genes

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