Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11393 Nelumbo nucifera HOM05D006184 ORTHO05D007862 1.3e-72 276.2 126 100.0
Nn2g13623 Nelumbo nucifera HOM05D006184 ORTHO05D007862 1.8e-71 272.3 125 98.4
Cfa011654 Carpinus fangiana HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
CiPaw.13G080700 Carya illinoinensis HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
COL.COLO4_19110 Corchorus olitorius HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Haze_24258 Corylus avellana HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Duzib168G0250 Durio zibethinus HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Gohir.A03G049500 Gossypium hirsutum HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Gorai.003G124300 Gossypium raimondii HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Lalb_Chr17g0345001 Lupinus albus HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Manes.01G164200 Manihot esculenta HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Manes.02G121696 Manihot esculenta HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
QL01p026813 Quercus lobata HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Thecc.09G305300 Theobroma cacao HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
VMungo0540G2418 Vigna mungo HOM05D006184 ORTHO05D007862 4.1e-71 271.2 125 97.6
Ah.15g099710 Amaranthus hybridus HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
AL4G24380 Arabidopsis lyrata HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
CARHR122950 Cardamine hirsuta HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Ca_14911_v3 Cicer arietinum L. HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
ECA248G3465 Erigeron canadensis HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Thhalv10016370m.g Eutrema salsugineum HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
HanXRQChr13g0388411 Helianthus annuus HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Lj6g0009842 Lotus japonicus HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
MBI05_g03463_MAGBIO Magnolia biondii HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 97.6
Medtr3g462950 Medicago truncatula HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Phvul.006G065300 Phaseolus vulgaris HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Psat5g162200 Pisum sativum HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Potri.001G249200 Populus trichocarpa HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Rhsim13G0072000 Rhododendron simsii HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
SalBow2G2183 Salvia bowleyana HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
Sp4g12340 Schrenkiella parvula HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
TPR.G13280 Trifolium pratense HOM05D006184 ORTHO05D007862 5.4e-71 270.8 125 96.8
MD03G1074000 Malus domestica HOM05D006184 ORTHO05D007862 7.0e-71 270.4 125 96.8
MD11G1080300 Malus domestica HOM05D006184 ORTHO05D007862 7.0e-71 270.4 125 96.8
Medtr3g462970 Medicago truncatula HOM05D006184 ORTHO05D007862 7.0e-71 270.4 125 96.8
Prupe.6G060700 Prunus persica HOM05D006184 ORTHO05D007862 7.0e-71 270.4 125 96.8
EL10Ac7g16128 Beta vulgaris HOM05D006184 ORTHO05D007862 9.1e-71 270.0 125 96.8
HanXRQChr10g0298731 Helianthus annuus HOM05D006184 ORTHO05D007862 9.1e-71 270.0 125 96.8
AT2G29630 Arabidopsis thaliana HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.0
Carub.0004s1072 Capsella rubella HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.0
Eucgr.B02273 Eucalyptus grandis HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
FvH4_3g38200 Fragaria vesca HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
FAN11G1847 Fragaria x ananassa HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
FAN25G1982 Fragaria x ananassa HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
Gohir.D03G117800 Gossypium hirsutum HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
Potri.009G043200 Populus trichocarpa HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
RcHm_v2.0_Chr5g0068641 Rosa chinensis HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
TAR633G0598 Trochodendron aralioides HOM05D006184 ORTHO05D007862 1.2e-70 269.6 125 96.8
ATR0564G389 Amborella trichopoda HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 96.8
arahy.Tifrunner.gnm1.ann1.N1U5TX Arachis hypogaea HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 96.0
CDE03G0407 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 96.8
AUR62001683 Chenopodium quinoa HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 96.0
AUR62020099 Chenopodium quinoa HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 96.0
DCAR_007390 Daucus carota HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 96.0
Hund04886 Selenicereus undatus HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 96.0
Solyc06g006080.3 Solanum lycopersicum HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 95.2
Sopen06g002030 Solanum pennellii HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 95.2
PGSC0003DMG400004151 Solanum tuberosum HOM05D006184 ORTHO05D007862 1.6e-70 269.2 125 95.2
CSS0002743 Camellia sinensis var. sinensis HOM05D006184 ORTHO05D007862 2.0e-70 268.9 125 96.0
Nitab4.5_0000102g0140 Nicotiana tabacum HOM05D006184 ORTHO05D007862 2.0e-70 268.9 125 95.2
Nitab4.5_0001970g0070 Nicotiana tabacum HOM05D006184 ORTHO05D007862 2.0e-70 268.9 125 95.2
Atru.chr3.4272 Acer truncatum HOM05D006184 ORTHO05D007862 2.7e-70 268.5 125 96.8
Ciclev10027988m.g Citrus clementina HOM05D006184 ORTHO05D007862 2.7e-70 268.5 125 96.0
Hma1.2p1_0227F.1_g096310 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 2.7e-70 268.5 125 95.2
Lj1A141T56 Lonicera japonica HOM05D006184 ORTHO05D007862 2.7e-70 268.5 125 95.2
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 2.7e-70 268.5 125 96.0
Aa31LG5G7380 Aethionema arabicum HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 95.2
arahy.Tifrunner.gnm1.ann1.F7MUQP Arachis hypogaea HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 95.2
MSTRG.24765 Avicennia marina HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 95.2
BcaB02g10267 Brassica carinata HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 96.0
BcaC02g11044 Brassica carinata HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 96.0
A05p15770 Brassica napus HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 96.0
C04p21210 Brassica napus HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 96.0
BraA05t20491Z Brassica rapa HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 96.0
Cc01_g13950 Coffea canephora HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 95.2
Migut.G00281 Erythranthe guttata HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 94.4
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 96.0
Oeu009379.1 Olea europaea HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 95.2
Oeu049272.2 Olea europaea HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 95.2
PGR102G1950 Punica granatum HOM05D006184 ORTHO05D007862 3.5e-70 268.1 125 96.0
CAN.G780.2 Capsicum annuum HOM05D006184 ORTHO05D007862 4.5e-70 267.7 125 94.4
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 4.5e-70 267.7 125 96.0
Glyma.18G065700 Glycine max HOM05D006184 ORTHO05D007862 4.5e-70 267.7 125 96.0
Sc06g0008420 Simmondsia chinensis HOM05D006184 ORTHO05D007862 4.5e-70 267.7 125 95.2
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 5.9e-70 267.3 125 94.4
CsaV3_1G036050 Cucumis sativus L. HOM05D006184 ORTHO05D007862 5.9e-70 267.3 125 94.4
Glyma.11G176200 Glycine max HOM05D006184 ORTHO05D007862 5.9e-70 267.3 125 95.2
Sabra09G0030600 Salix brachista HOM05D006184 ORTHO05D007862 5.9e-70 267.3 125 95.2
Sed0012033 Sechium edule HOM05D006184 ORTHO05D007862 5.9e-70 267.3 125 94.4
Actinidia38827 Actinidia chinensis HOM05D006184 ORTHO05D007862 7.7e-70 266.9 125 95.2
BolC4t23646H Brassica oleracea HOM05D006184 ORTHO05D007862 7.7e-70 266.9 125 95.2
Zm00001eb051950 Zea mays HOM05D006184 ORTHO05D007862 7.7e-70 266.9 125 96.0
CDE04G0688 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 1.0e-69 266.5 125 96.0
ClCG03G000880 Citrullus lanatus HOM05D006184 ORTHO05D007862 1.0e-69 266.5 125 94.4
Lsat_1_v5_gn_5_158421 Lactuca sativa HOM05D006184 ORTHO05D007862 1.7e-69 265.8 125 94.4
GSVIVG01024789001 Vitis vinifera HOM05D006184 ORTHO05D007862 1.7e-69 265.8 125 94.4
Os03g0679700 Oryza sativa ssp. japonica HOM05D006184 ORTHO05D007862 2.2e-69 265.4 125 95.2
Ah.08g220740 Amaranthus hybridus HOM05D006184 ORTHO05D007862 2.9e-69 265.0 125 94.4
Aqoxy4G02661 Aquilegia oxysepala HOM05D006184 ORTHO05D007862 5.0e-69 264.2 125 94.4
Sc12g0000880 Simmondsia chinensis HOM05D006184 ORTHO05D007862 6.5e-69 263.8 125 94.4
Pp3c25_5720 Physcomitrium patens HOM05D006184 ORTHO05D007862 3.2e-68 261.5 125 92.8
SGA_v2.0_scaffold142G35644 Striga asiatica HOM05D006184 ORTHO05D007862 3.2e-68 261.5 125 92.8
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 9.4e-68 260.0 125 93.6
Pp3c16_8630 Physcomitrium patens HOM05D006184 ORTHO05D007862 1.2e-67 259.6 125 92.0
AagrBONN_evm.TU.Sc2ySwM_117.2039 Anthoceros agrestis HOM05D006184 ORTHO05D007862 2.7e-67 258.5 125 91.2
CBR_g30996 Chara braunii HOM05D006184 ORTHO05D007862 8.0e-67 256.9 124 90.3
Mapoly0078s0008 Marchantia polymorpha HOM05D006184 ORTHO05D007862 3.0e-66 255.0 125 89.6
SMO165G0141 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.5e-65 252.7 125 87.2
SMO272G0033 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.5e-65 252.7 125 87.2
Peaxi162Scf00216g00033 Petunia axillaris HOM05D006184 ORTHO05D007862 2.6e-65 251.9 126 90.5
Peaxi162Scf00451g00511 Petunia axillaris HOM05D006184 ORTHO05D007862 2.6e-65 251.9 126 90.5
Cpa.g.sc112.53 Carica papaya HOM05D006184 ORTHO05D007862 1.9e-60 235.7 125 86.4
Cre05.g240850 Chlamydomonas reinhardtii HOM05D006184 ORTHO05D007862 2.1e-59 232.3 125 83.2
SHI12345 Sapria himalayana HOM05D006184 ORTHO05D007862 2.8e-59 231.9 125 82.4
RcHm_v2.0_Chr5g0068681 Rosa chinensis HOM05D006184 ORTHO05D007862 1.3e-56 223.0 108 92.6
Cfa015458 Carpinus fangiana HOM05D006184 ORTHO05D007862 8.6e-53 210.3 99 96.0
SMO165G0069 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.2e-51 206.5 125 74.4
Haze_26876 Corylus avellana HOM05D006184 ORTHO05D007862 5.4e-47 191.0 125 70.4
Sabra16G0151300 Salix brachista HOM05D006184 ORTHO05D007862 4.0e-42 174.9 81 97.5
vmacro02987 Vaccinium macrocarpon HOM05D006184 ORTHO05D007862 6.0e-30 134.4 61 95.1
SEGI_15306 Sequoiadendron giganteum HOM05D006184 ORTHO05D007862 5.1e-13 78.2 43 76.7


User provided reference genes

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