Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g11083 Nelumbo nucifera HOM05D006159 ORTHO05D007624 3.0e-131 471.9 236 100.0
TAR633G1181 Trochodendron aralioides HOM05D006159 ORTHO05D007624 8.7e-83 310.8 378 48.4
Rhsim01G0241600 Rhododendron simsii HOM05D006159 ORTHO05D007624 6.5e-78 294.7 368 45.4
CSS0020536 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 8.5e-78 294.3 364 46.2
GSVIVG01024604001 Vitis vinifera HOM05D006159 ORTHO05D007624 1.1e-77 293.9 365 46.6
CiPaw.14G053000 Carya illinoinensis HOM05D006159 ORTHO05D007624 4.6e-76 288.5 355 47.0
vmacro14626 Vaccinium macrocarpon HOM05D006159 ORTHO05D007624 1.0e-75 287.3 367 45.2
PSO017G5079 Papaver somniferum HOM05D006159 ORTHO05D007624 1.4e-75 287.0 365 45.8
Dinv28707 Davidia involucrata HOM05D006159 ORTHO05D007624 5.1e-75 285.0 386 44.3
SGA_v2.0_scaffold5G02753 Striga asiatica HOM05D006159 ORTHO05D007624 2.0e-74 283.1 352 46.3
Hma1.2p1_1586F.1_g292125 Hydrangea macrophylla HOM05D006159 ORTHO05D007624 3.3e-74 282.3 384 44.0
RcHm_v2.0_Chr5g0072261 Rosa chinensis HOM05D006159 ORTHO05D007624 5.7e-74 281.6 381 41.7
Aqoxy4G02147 Aquilegia oxysepala HOM05D006159 ORTHO05D007624 2.2e-73 279.6 371 45.0
Migut.N00748 Erythranthe guttata HOM05D006159 ORTHO05D007624 2.2e-73 279.6 372 44.4
TPR.G27348 Trifolium pratense HOM05D006159 ORTHO05D007624 2.2e-73 279.6 375 44.5
Gorai.003G151400 Gossypium raimondii HOM05D006159 ORTHO05D007624 6.3e-73 278.1 365 44.7
FAN21G3656 Fragaria x ananassa HOM05D006159 ORTHO05D007624 8.2e-73 277.7 371 42.6
Gohir.A03G024400 Gossypium hirsutum HOM05D006159 ORTHO05D007624 1.1e-72 277.3 365 44.7
Nitab4.5_0005248g0030 Nicotiana tabacum HOM05D006159 ORTHO05D007624 1.4e-72 276.9 371 43.4
FvH4_3g40070 Fragaria vesca HOM05D006159 ORTHO05D007624 1.8e-72 276.6 371 42.3
FAN16G1196 Fragaria x ananassa HOM05D006159 ORTHO05D007624 1.8e-72 276.6 371 42.3
Rhsim13G0062400 Rhododendron simsii HOM05D006159 ORTHO05D007624 1.8e-72 276.6 366 45.4
Thecc.09G360700 Theobroma cacao HOM05D006159 ORTHO05D007624 1.8e-72 276.6 367 44.7
FAN25G2364 Fragaria x ananassa HOM05D006159 ORTHO05D007624 4.1e-72 275.4 371 42.0
vmacro02902 Vaccinium macrocarpon HOM05D006159 ORTHO05D007624 5.3e-72 275.0 365 44.9
FAN11G2758 Fragaria x ananassa HOM05D006159 ORTHO05D007624 1.5e-71 273.5 371 42.0
PSO170G6759 Papaver somniferum HOM05D006159 ORTHO05D007624 2.6e-71 272.7 363 44.1
Haze_24438 Corylus avellana HOM05D006159 ORTHO05D007624 3.4e-71 272.3 357 44.3
Lj2A1097G33 Lonicera japonica HOM05D006159 ORTHO05D007624 1.3e-70 270.4 380 41.8
Ca_05688_v3 Cicer arietinum L. HOM05D006159 ORTHO05D007624 1.7e-70 270.0 372 42.5
Cc01_g15060 Coffea canephora HOM05D006159 ORTHO05D007624 2.2e-70 269.6 383 43.3
Sopen09g019910 Solanum pennellii HOM05D006159 ORTHO05D007624 2.2e-70 269.6 362 42.5
COL.COLO4_11182 Corchorus olitorius HOM05D006159 ORTHO05D007624 5.0e-70 268.5 373 42.9
Prupe.6G045100 Prunus persica HOM05D006159 ORTHO05D007624 5.0e-70 268.5 382 40.8
QL01p025515 Quercus lobata HOM05D006159 ORTHO05D007624 5.0e-70 268.5 417 38.4
CSS0033482 Camellia sinensis var. sinensis HOM05D006159 ORTHO05D007624 6.5e-70 268.1 426 39.2
Duzib168G0394 Durio zibethinus HOM05D006159 ORTHO05D007624 1.4e-69 266.9 358 45.0
CANSAT54G0267 Cannabis sativa HOM05D006159 ORTHO05D007624 3.2e-69 265.8 368 42.7
Lalb_Chr17g0345491 Lupinus albus HOM05D006159 ORTHO05D007624 7.2e-69 264.6 371 41.2
CiPaw.13G066700 Carya illinoinensis HOM05D006159 ORTHO05D007624 1.6e-68 263.5 384 41.4
Glyma.02G233600 Glycine max HOM05D006159 ORTHO05D007624 1.6e-68 263.5 376 42.3
SalBow2G3538 Salvia bowleyana HOM05D006159 ORTHO05D007624 1.6e-68 263.5 364 42.0
Medtr5g074640 Medicago truncatula HOM05D006159 ORTHO05D007624 2.7e-68 262.7 365 42.2
Phvul.008G250100 Phaseolus vulgaris HOM05D006159 ORTHO05D007624 2.7e-68 262.7 365 42.5
MD11G1060800 Malus domestica HOM05D006159 ORTHO05D007624 7.9e-68 261.2 377 41.4
arahy.Tifrunner.gnm1.ann1.C311ZQ Arachis hypogaea HOM05D006159 ORTHO05D007624 2.3e-67 259.6 348 42.8
Peaxi162Scf00095g10135 Petunia axillaris HOM05D006159 ORTHO05D007624 2.3e-67 259.6 387 40.6
Lsat_1_v5_gn_9_14440 Lactuca sativa HOM05D006159 ORTHO05D007624 5.1e-67 258.5 365 41.6
VMungo0647G0641 Vigna mungo HOM05D006159 ORTHO05D007624 5.1e-67 258.5 365 41.1
MSTRG.17900 Avicennia marina HOM05D006159 ORTHO05D007624 1.1e-66 257.3 372 41.7
Psat0s1662g0080 Pisum sativum HOM05D006159 ORTHO05D007624 1.5e-66 256.9 357 41.7
EL10Ac7g15868 Beta vulgaris HOM05D006159 ORTHO05D007624 9.7e-66 254.2 365 41.6
arahy.Tifrunner.gnm1.ann1.3A3S4A Arachis hypogaea HOM05D006159 ORTHO05D007624 1.7e-65 253.4 362 41.2
TPR.G27345 Trifolium pratense HOM05D006159 ORTHO05D007624 4.8e-65 251.9 355 41.1
Ah.15g096550 Amaranthus hybridus HOM05D006159 ORTHO05D007624 1.4e-64 250.4 364 40.7
arahy.Tifrunner.gnm1.ann1.N5JXUH Arachis hypogaea HOM05D006159 ORTHO05D007624 1.4e-64 250.4 337 43.0
Atru.chr1.2561 Acer truncatum HOM05D006159 ORTHO05D007624 3.1e-64 249.2 363 41.3
AUR62009718 Chenopodium quinoa HOM05D006159 ORTHO05D007624 4.1e-64 248.8 365 40.8
Medtr5g074620 Medicago truncatula HOM05D006159 ORTHO05D007624 5.3e-64 248.4 351 41.0
Os03g0338600 Oryza sativa ssp. japonica HOM05D006159 ORTHO05D007624 7.0e-64 248.1 360 41.7
TWI31G0474 Tripterygium wilfordii HOM05D006159 ORTHO05D007624 7.0e-64 248.1 351 42.7
Phvul.008G250200 Phaseolus vulgaris HOM05D006159 ORTHO05D007624 9.1e-64 247.7 366 39.9
VMungo0647G1827 Vigna mungo HOM05D006159 ORTHO05D007624 5.9e-63 245.0 366 39.9
MELO3C020498.2 Cucumis melo HOM05D006159 ORTHO05D007624 7.7e-63 244.6 364 39.0
Glyma.02G233500 Glycine max HOM05D006159 ORTHO05D007624 7.7e-63 244.6 366 40.7
Actinidia23185 Actinidia chinensis HOM05D006159 ORTHO05D007624 1.0e-62 244.2 362 42.3
Glyma.U039500 Glycine max HOM05D006159 ORTHO05D007624 1.3e-62 243.8 369 40.1
Sabra13G0124000 Salix brachista HOM05D006159 ORTHO05D007624 2.2e-62 243.0 372 39.0
AUR62036228 Chenopodium quinoa HOM05D006159 ORTHO05D007624 8.5e-62 241.1 362 40.1
arahy.Tifrunner.gnm1.ann1.9T2ABX Arachis hypogaea HOM05D006159 ORTHO05D007624 1.1e-61 240.7 330 43.0
Sp4g12880 Schrenkiella parvula HOM05D006159 ORTHO05D007624 1.5e-61 240.4 363 38.0
Manes.18G138800 Manihot esculenta HOM05D006159 ORTHO05D007624 1.9e-61 240.0 354 40.7
LjContig00141g0000315 Lotus japonicus HOM05D006159 ORTHO05D007624 7.2e-61 238.0 363 39.1
LjContig00141g0002443 Lotus japonicus HOM05D006159 ORTHO05D007624 9.4e-61 237.7 362 40.6
ECA247G0586 Erigeron canadensis HOM05D006159 ORTHO05D007624 1.2e-60 237.3 384 38.8
Potri.013G154200 Populus trichocarpa HOM05D006159 ORTHO05D007624 1.6e-60 236.9 364 39.8
HPP92_011991 Vanilla planifolia HOM05D006159 ORTHO05D007624 2.7e-60 236.1 350 40.9
Ca_27536_v3 Cicer arietinum L. HOM05D006159 ORTHO05D007624 4.7e-60 235.3 394 38.3
HanXRQChr08g0228561 Helianthus annuus HOM05D006159 ORTHO05D007624 8.0e-60 234.6 379 38.8
CsaV3_1G036700 Cucumis sativus L. HOM05D006159 ORTHO05D007624 1.0e-59 234.2 363 38.0
Eucgr.J03050 Eucalyptus grandis HOM05D006159 ORTHO05D007624 1.0e-59 234.2 369 37.4
ECA247G2911 Erigeron canadensis HOM05D006159 ORTHO05D007624 1.4e-59 233.8 372 38.4
A03p16930 Brassica napus HOM05D006159 ORTHO05D007624 5.2e-59 231.9 347 38.9
C03p19940 Brassica napus HOM05D006159 ORTHO05D007624 5.2e-59 231.9 354 37.9
BolC3t14372H Brassica oleracea HOM05D006159 ORTHO05D007624 5.2e-59 231.9 354 37.9
Sed0023817 Sechium edule HOM05D006159 ORTHO05D007624 5.2e-59 231.9 362 37.6
Thhalv10016529m.g Eutrema salsugineum HOM05D006159 ORTHO05D007624 1.5e-58 230.3 350 37.1
ClCG03G000200 Citrullus lanatus HOM05D006159 ORTHO05D007624 5.7e-58 228.4 380 36.8
Zm00001eb016190 Zea mays HOM05D006159 ORTHO05D007624 7.5e-58 228.0 361 38.2
AL4G25180 Arabidopsis lyrata HOM05D006159 ORTHO05D007624 1.1e-56 224.2 351 37.9
AT2G30320 Arabidopsis thaliana HOM05D006159 ORTHO05D007624 2.4e-56 223.0 353 37.4
CARHR123640 Cardamine hirsuta HOM05D006159 ORTHO05D007624 2.4e-56 223.0 351 37.3
Aa31LG5G6390 Aethionema arabicum HOM05D006159 ORTHO05D007624 5.3e-56 221.9 367 36.2
THA.LOC104800779 Tarenaya hassleriana HOM05D006159 ORTHO05D007624 1.3e-54 217.2 370 35.1
Carub.0004s1147 Capsella rubella HOM05D006159 ORTHO05D007624 1.7e-54 216.9 350 36.6
BcaC01g05985 Brassica carinata HOM05D006159 ORTHO05D007624 1.2e-52 210.7 338 36.7
Ciclev10003830m.g Citrus clementina HOM05D006159 ORTHO05D007624 3.6e-52 209.1 350 37.7
ATR1127G103 Amborella trichopoda HOM05D006159 ORTHO05D007624 6.1e-52 208.4 333 39.6
Gohir.D03G144100 Gossypium hirsutum HOM05D006159 ORTHO05D007624 6.1e-52 208.4 337 40.4
Nitab4.5_0001438g0090 Nicotiana tabacum HOM05D006159 ORTHO05D007624 3.7e-49 199.1 128 73.4
PGR031G1374 Punica granatum HOM05D006159 ORTHO05D007624 3.7e-49 199.1 405 33.6
Psat2g052680 Pisum sativum HOM05D006159 ORTHO05D007624 9.1e-48 194.5 147 64.6
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 3.5e-47 192.6 326 39.0
PGSC0003DMG400018825 Solanum tuberosum HOM05D006159 ORTHO05D007624 1.0e-46 191.0 124 71.8
Cpa.g.c29031.3 Carica papaya HOM05D006159 ORTHO05D007624 7.2e-45 184.9 140 64.3
Lalb_Chr10g0103671 Lupinus albus HOM05D006159 ORTHO05D007624 2.2e-41 173.3 132 63.6
Sopen02g007480 Solanum pennellii HOM05D006159 ORTHO05D007624 3.1e-40 169.5 120 68.3
Actinidia34484 Actinidia chinensis HOM05D006159 ORTHO05D007624 4.4e-34 149.1 104 69.2
DCAR_012721 Daucus carota HOM05D006159 ORTHO05D007624 4.9e-33 145.6 94 72.3
Psat2g052720 Pisum sativum HOM05D006159 ORTHO05D007624 1.2e-31 141.0 95 68.4
Sc12g0000200 Simmondsia chinensis HOM05D006159 ORTHO05D007624 1.7e-30 137.1 94 67.0
SMO134G0068 Selaginella moellendorffii HOM05D006159 ORTHO05D007624 3.1e-27 126.3 349 26.9
Pp3c2_21310 Physcomitrium patens HOM05D006159 ORTHO05D007624 2.6e-26 123.2 392 26.3
AagrBONN_evm.TU.Sc2ySwM_117.4076 Anthoceros agrestis HOM05D006159 ORTHO05D007624 4.4e-26 122.5 352 25.9
SEGI_02969 Sequoiadendron giganteum HOM05D006159 ORTHO05D007624 5.8e-26 122.1 136 49.3
SMO367G0138 Selaginella moellendorffii HOM05D006159 ORTHO05D007624 7.5e-26 121.7 333 26.1
Mapoly0146s0022 Marchantia polymorpha HOM05D006159 ORTHO05D007624 3.7e-25 119.4 365 26.3
SEGI_25961 Sequoiadendron giganteum HOM05D006159 ORTHO05D007624 6.6e-22 108.6 88 54.5
SEGI_25849 Sequoiadendron giganteum HOM05D006159 ORTHO05D007624 8.6e-22 108.2 87 55.2
CARHR034090 Cardamine hirsuta HOM05D006159 ORTHO05D007624 4.0e-19 99.4 93 54.8
CAN.G3.12 Capsicum annuum HOM05D006159 ORTHO05D007624 4.7e-12 75.9 46 73.9
Actinidia23852 Actinidia chinensis HOM05D006159 ORTHO05D007624 6.8e-11 72.0 46 78.3
MCO08G183 Micromonas commoda HOM05D006159 ORTHO05D007624 5.8e-10 68.9 70 41.4
CBR_g51420 Chara braunii HOM05D006159 ORTHO05D007624 1.3e-09 67.8 160 32.5
Cre03.g152950 Chlamydomonas reinhardtii HOM05D006159 ORTHO05D007624 4.9e-09 65.9 97 35.1


User provided reference genes

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