Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g07027 Nelumbo nucifera HOM05D006350 ORTHO05D007850 9.6e-43 176.4 88 100.0
Nn1g00065 Nelumbo nucifera HOM05D006350 ORTHO05D007850 4.6e-21 104.4 85 60.0
Nn1g03636 Nelumbo nucifera HOM05D006350 ORTHO05D007850 4.6e-21 104.4 85 60.0
MBI02_g10104_MAGBIO Magnolia biondii HOM05D006350 ORTHO05D007850 1.1e-17 93.2 76 53.9
TAR629G2651 Trochodendron aralioides HOM05D006350 ORTHO05D007850 1.1e-17 93.2 74 59.5
VMungo1215G2459 Vigna mungo HOM05D006350 ORTHO05D007850 1.4e-14 82.8 78 48.7
Dinv17832 Davidia involucrata HOM05D006350 ORTHO05D007850 1.9e-14 82.4 62 58.1
CANSAT80G1390 Cannabis sativa HOM05D006350 ORTHO05D007850 3.2e-14 81.6 92 45.7
Dinv20017 Davidia involucrata HOM05D006350 ORTHO05D007850 3.2e-14 81.6 62 56.5
Rhsim02G0112000 Rhododendron simsii HOM05D006350 ORTHO05D007850 5.5e-14 80.9 84 45.2
Oeu051224.2 Olea europaea HOM05D006350 ORTHO05D007850 7.2e-14 80.5 62 56.5
Lsat_1_v5_gn_1_127601 Lactuca sativa HOM05D006350 ORTHO05D000125 9.4e-14 80.1 74 56.8
Ciclev10014587m.g Citrus clementina HOM05D006350 ORTHO05D007850 1.2e-13 79.7 62 56.5
Cc02_g11710 Coffea canephora HOM05D006350 ORTHO05D007850 2.1e-13 79.0 88 45.5
vmacro15831 Vaccinium macrocarpon HOM05D006350 ORTHO05D007850 2.1e-13 79.0 73 50.7
CSS0007285 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 2.7e-13 78.6 79 45.6
CSS0026996 Camellia sinensis var. sinensis HOM05D006350 ORTHO05D007850 2.7e-13 78.6 79 45.6
COL.COLO4_31726 Corchorus olitorius HOM05D006350 ORTHO05D007850 2.7e-13 78.6 62 58.1
Gohir.A10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 2.7e-13 78.6 62 59.7
Psat3g152760 Pisum sativum HOM05D006350 ORTHO05D007850 2.7e-13 78.6 65 49.2
arahy.Tifrunner.gnm1.ann1.QV9JTX Arachis hypogaea HOM05D006350 ORTHO05D007850 3.6e-13 78.2 63 54.0
Ca_07431_v3 Cicer arietinum L. HOM05D006350 ORTHO05D007850 3.6e-13 78.2 65 50.8
MELO3C007370.2 Cucumis melo HOM05D006350 ORTHO05D007850 4.6e-13 77.8 62 58.1
CsaV3_6G049260 Cucumis sativus L. HOM05D006350 ORTHO05D007850 4.6e-13 77.8 62 58.1
Duzib160G0024 Durio zibethinus HOM05D006350 ORTHO05D007850 6.1e-13 77.4 62 56.5
Sopen03g005680 Solanum pennellii HOM05D006350 ORTHO05D007850 1.0e-12 76.6 62 53.2
PGSC0003DMG400024073 Solanum tuberosum HOM05D006350 ORTHO05D007850 1.0e-12 76.6 62 53.2
Glyma.04G064300 Glycine max HOM05D006350 ORTHO05D007850 1.4e-12 76.3 65 52.3
HanXRQChr16g0504561 Helianthus annuus HOM05D006350 ORTHO05D007850 1.4e-12 76.3 63 57.1
PSO541G3631 Papaver somniferum HOM05D006350 ORTHO05D007850 1.4e-12 76.3 62 59.7
Aqoxy4G01993 Aquilegia oxysepala HOM05D006350 ORTHO05D007850 1.8e-12 75.9 99 41.4
arahy.Tifrunner.gnm1.ann1.SC0FBD Arachis hypogaea HOM05D006350 ORTHO05D007850 1.8e-12 75.9 63 52.4
Gohir.D10G015200 Gossypium hirsutum HOM05D006350 ORTHO05D007850 1.8e-12 75.9 62 56.5
Solyc03g031820.4 Solanum lycopersicum HOM05D006350 ORTHO05D007850 1.8e-12 75.9 62 53.2
Thecc.06G214100 Theobroma cacao HOM05D006350 ORTHO05D007850 1.8e-12 75.9 62 56.5
Atru.chr10.2148 Acer truncatum HOM05D006350 ORTHO05D007850 2.3e-12 75.5 62 53.2
Gorai.011G016800 Gossypium raimondii HOM05D006350 ORTHO05D007850 2.3e-12 75.5 62 58.1
CDE05G1739 Ceratophyllum demersum HOM05D006350 ORTHO05D007850 3.0e-12 75.1 66 45.5
Medtr7g050860 Medicago truncatula HOM05D006350 ORTHO05D007850 3.0e-12 75.1 63 49.2
TPR.G10193 Trifolium pratense HOM05D006350 ORTHO05D007850 3.0e-12 75.1 63 46.0
BolC3t13297H Brassica oleracea HOM05D006350 ORTHO05D007850 3.9e-12 74.7 79 44.3
CiPaw.09G087000 Carya illinoinensis HOM05D006350 ORTHO05D007850 3.9e-12 74.7 63 55.6
ECA248G2377 Erigeron canadensis HOM05D006350 ORTHO05D007850 3.9e-12 74.7 77 48.1
CAN.G404.6 Capsicum annuum HOM05D006350 ORTHO05D007850 5.1e-12 74.3 62 51.6
BcaB01g05074 Brassica carinata HOM05D006350 ORTHO05D007850 6.7e-12 73.9 79 43.0
C03p08000 Brassica napus HOM05D006350 ORTHO05D007850 6.7e-12 73.9 79 43.0
Cpa.g.sc198.9 Carica papaya HOM05D006350 ORTHO05D007850 6.7e-12 73.9 74 44.6
AUR62022012 Chenopodium quinoa HOM05D006350 ORTHO05D007850 6.7e-12 73.9 70 51.4
ClCG01G022180 Citrullus lanatus HOM05D006350 ORTHO05D007850 8.8e-12 73.6 62 54.8
Phvul.002G048900 Phaseolus vulgaris HOM05D006350 ORTHO05D007850 8.8e-12 73.6 65 49.2
QL93p0073_0722 Quercus lobata HOM05D006350 ORTHO05D007850 8.8e-12 73.6 62 51.6
AUR62012643 Chenopodium quinoa HOM05D006350 ORTHO05D007850 1.1e-11 73.2 70 51.4
Nitab4.5_0002613g0020 Nicotiana tabacum HOM05D006350 ORTHO05D007850 1.1e-11 73.2 62 51.6
PSO675G5568 Papaver somniferum HOM05D006350 ORTHO05D007850 1.1e-11 73.2 62 56.5
MSTRG.15966 Avicennia marina HOM05D006350 ORTHO05D007850 1.5e-11 72.8 62 48.4
A03p07020 Brassica napus HOM05D006350 ORTHO05D007850 1.5e-11 72.8 79 43.0
Os07g0530100 Oryza sativa ssp. japonica HOM05D006350 ORTHO05D007850 2.0e-11 72.4 62 46.8
SGA_v2.0_scaffold114G32022 Striga asiatica HOM05D006350 ORTHO05D007850 2.0e-11 72.4 65 49.2
QL05p075148 Quercus lobata HOM05D006350 ORTHO05D007850 2.5e-11 72.0 62 50.0
TWI63G1388 Tripterygium wilfordii HOM05D006350 ORTHO05D007850 2.5e-11 72.0 62 53.2
Manes.17G035000 Manihot esculenta HOM05D006350 ORTHO05D007850 3.3e-11 71.6 76 39.5
Nitab4.5_0000091g0460 Nicotiana tabacum HOM05D006350 ORTHO05D007850 3.3e-11 71.6 62 51.6
PGR004G2689 Punica granatum HOM05D006350 ORTHO05D007850 3.3e-11 71.6 65 49.2
GSVIVG01012630001 Vitis vinifera HOM05D006350 ORTHO05D007850 3.3e-11 71.6 62 53.2
Zm00001eb323120 Zea mays HOM05D006350 ORTHO05D007850 3.3e-11 71.6 62 48.4
AL6G25990 Arabidopsis lyrata HOM05D006350 ORTHO05D007850 5.7e-11 70.9 81 42.0
THA.LOC104821036 Tarenaya hassleriana HOM05D006350 ORTHO05D007850 5.7e-11 70.9 67 44.8
Prupe.4G026100 Prunus persica HOM05D006350 ORTHO05D007850 9.7e-11 70.1 65 49.2
Sc05g0008890 Simmondsia chinensis HOM05D006350 ORTHO05D007850 9.7e-11 70.1 62 50.0
MD10G1314700 Malus domestica HOM05D006350 ORTHO05D007850 1.3e-10 69.7 65 49.2
Eucgr.D00813 Eucalyptus grandis HOM05D006350 ORTHO05D007850 2.2e-10 68.9 65 49.2
Lj1g0012123 Lotus japonicus HOM05D006350 ORTHO05D007850 2.2e-10 68.9 67 46.3
DCAR_008125 Daucus carota HOM05D006350 ORTHO05D007850 2.8e-10 68.6 62 46.8
Migut.M01281 Erythranthe guttata HOM05D006350 ORTHO05D007850 2.8e-10 68.6 62 46.8
Peaxi162Scf00521g00815 Petunia axillaris HOM05D006350 ORTHO05D007850 2.8e-10 68.6 62 48.4
Eucgr.L01729 Eucalyptus grandis HOM05D006350 ORTHO05D007850 3.7e-10 68.2 65 47.7
Aa31LG11G14390 Aethionema arabicum HOM05D006350 ORTHO05D007850 4.8e-10 67.8 67 44.8
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 4.8e-10 67.8 78 41.0
HPP92_017616 Vanilla planifolia HOM05D006350 ORTHO05D007850 6.3e-10 67.4 77 39.0
Lj1A1225T76 Lonicera japonica HOM05D006350 ORTHO05D007850 8.2e-10 67.0 70 47.1
Thhalv10012972m.g Eutrema salsugineum HOM05D006350 ORTHO05D007850 2.4e-09 65.5 72 43.1
FAN21G3377 Fragaria x ananassa HOM05D006350 ORTHO05D007850 2.4e-09 65.5 67 43.3
Sp6g28900 Schrenkiella parvula HOM05D006350 ORTHO05D007850 3.1e-09 65.1 72 43.1
EL10Ac8g19892 Beta vulgaris HOM05D006350 ORTHO05D007850 4.1e-09 64.7 63 54.0
ATR0109G008 Amborella trichopoda HOM05D006350 ORTHO05D007850 6.9e-09 63.9 75 40.0
Carub.0006s1334 Capsella rubella HOM05D006350 ORTHO05D007850 6.9e-09 63.9 81 43.2
Lalb_Chr09g0319631 Lupinus albus HOM05D006350 ORTHO05D007850 6.9e-09 63.9 64 48.4
Hund23514 Selenicereus undatus HOM05D006350 ORTHO05D007850 9.1e-09 63.5 65 49.2
RcHm_v2.0_Chr5g0003961 Rosa chinensis HOM05D006350 ORTHO05D007850 1.2e-08 63.2 67 44.8
AT5G15170 Arabidopsis thaliana HOM05D006350 ORTHO05D007850 5.9e-08 60.8 67 43.3
FAN25G1413 Fragaria x ananassa HOM05D006350 ORTHO05D007850 1.0e-07 60.1 68 39.7
FvH4_3g02650 Fragaria vesca HOM05D006350 ORTHO05D007850 3.8e-07 58.2 68 36.8
Pp3c10_12100 Physcomitrium patens HOM05D006350 ORTHO05D007850 1.1e-06 56.6 90 32.2
DCAR_001582 Daucus carota HOM05D006350 ORTHO05D007850 2.5e-06 55.5 67 41.8
Potri.004G022500 Populus trichocarpa HOM05D006350 ORTHO05D007850 3.2e-06 55.1 63 46.0
SEGI_36047 Sequoiadendron giganteum HOM05D006350 ORTHO05D007850 5.5e-06 54.3 86 36.0
Sabra04G0012300 Salix brachista HOM05D006350 ORTHO05D007850 9.4e-06 53.5 63 41.3


User provided reference genes

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