Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 6.9e-165 583.9 304 100.0
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 6.0e-92 341.7 286 65.0
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 1.1e-90 337.4 283 65.7
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 9.5e-90 334.3 283 65.7
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 6.2e-89 331.6 284 64.1
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 3.1e-88 329.3 282 62.8
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 8.9e-88 327.8 288 62.8
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.3e-86 323.9 287 62.7
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.7e-86 323.6 287 61.3
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 6.4e-86 321.6 287 61.0
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.6e-84 317.0 271 64.2
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 6.0e-84 315.1 280 60.7
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 7.8e-84 314.7 307 57.7
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.5e-82 310.5 286 59.8
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.5e-82 310.5 286 60.1
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.5e-82 310.5 286 60.1
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 3.3e-82 309.3 290 60.7
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 4.3e-82 308.9 283 59.0
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 4.3e-82 308.9 283 59.0
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 5.6e-82 308.5 286 58.4
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 5.6e-82 308.5 284 60.6
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.5e-82 307.8 284 59.2
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.6e-81 307.0 284 59.5
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.8e-81 306.2 286 59.1
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 2.8e-81 306.2 289 58.5
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.8e-81 306.2 283 58.7
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 6.2e-81 305.1 285 58.2
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 6.2e-81 305.1 283 58.7
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.1e-80 304.3 271 62.4
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.4e-80 303.9 283 58.3
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 2.3e-80 303.1 283 58.3
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.0e-80 302.4 264 61.4
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 4.0e-80 302.4 282 58.9
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 5.2e-80 302.0 286 57.7
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.5e-79 300.4 286 57.3
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 2.0e-79 300.1 266 60.5
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.6e-79 299.7 288 59.4
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 2.6e-79 299.7 283 60.4
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 4.4e-79 298.9 291 59.8
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 5.8e-79 298.5 282 56.7
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 5.8e-79 298.5 255 64.3
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 5.8e-79 298.5 270 61.5
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 1.3e-78 297.4 282 58.5
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.2e-78 296.6 267 61.8
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 2.2e-78 296.6 283 59.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 3.7e-78 295.8 282 57.8
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 4.9e-78 295.4 282 57.4
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 2.4e-77 293.1 287 57.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 2.4e-77 293.1 283 59.0
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 5.4e-77 292.0 282 57.4
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 5.4e-77 292.0 302 53.6
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 7.1e-77 291.6 282 57.4
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 9.2e-77 291.2 282 57.4
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.6e-76 290.4 270 60.7
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.7e-76 289.7 282 57.1
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 6.0e-76 288.5 282 56.7
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.0e-75 287.7 285 56.5
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.3e-75 287.3 237 64.6
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 3.0e-75 286.2 274 56.6
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.0e-75 286.2 261 58.2
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 3.0e-75 286.2 262 58.8
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 5.1e-75 285.4 271 58.7
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.9e-74 283.5 267 57.7
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 4.7e-73 278.9 243 61.3
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.1e-72 277.7 282 53.9
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 5.2e-72 275.4 285 55.8
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 6.8e-72 275.0 285 55.4
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.5e-71 273.9 379 44.6
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 4.4e-71 272.3 282 53.5
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 5.8e-71 271.9 282 53.5
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 5.8e-71 271.9 288 54.2
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 9.9e-71 271.2 282 56.0
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 2.9e-70 269.6 282 52.8
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 2.9e-70 269.6 285 54.0
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.9e-69 266.9 255 57.6
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.2e-69 266.2 308 51.3
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 7.1e-69 265.0 314 51.3
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 9.3e-69 264.6 276 54.7
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 9.3e-69 264.6 285 53.0
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.6e-68 263.8 261 54.4
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.1e-68 263.5 284 54.2
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.7e-68 263.1 285 54.4
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 3.5e-68 262.7 274 54.4
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 2.5e-66 256.5 293 52.9
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 5.6e-66 255.4 285 52.3
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 5.6e-66 255.4 282 51.8
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 7.3e-66 255.0 286 50.3
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.3e-65 254.2 227 57.7
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.3e-65 254.2 227 57.7
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 2.1e-65 253.4 227 57.3
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 2.4e-64 250.0 292 51.0
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 1.2e-63 247.7 287 52.6
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 7.6e-63 245.0 181 64.6
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 2.6e-55 219.9 283 50.2
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 4.9e-54 215.7 244 52.5
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 6.4e-54 215.3 301 45.5
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.4e-53 214.2 476 35.3
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.1e-52 210.3 285 45.6
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 7.4e-50 201.8 159 60.4
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 4.0e-48 196.1 140 64.3
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.4e-45 187.6 287 43.6
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 6.9e-40 168.7 98 78.6
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 8.4e-38 161.8 168 58.9
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.1e-37 161.4 257 37.0
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 6.9e-32 142.1 145 64.1
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 9.0e-32 141.7 287 35.5
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 1.4e-27 127.9 98 57.1
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 6.7e-27 125.6 261 35.2
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.5e-26 124.4 137 48.2
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 6.5e-22 109.0 131 48.9
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 4.7e-20 102.8 93 54.8
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 1.0e-14 85.1 151 42.4
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 3.8e-14 83.2 207 30.4
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 2.5e-13 80.5 277 26.0
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 3.2e-13 80.1 285 27.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 3.6e-12 76.6 97 50.5
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 6.1e-12 75.9 153 43.1
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 2.3e-11 73.9 138 46.4
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 1.5e-10 71.2 163 31.3
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.4e-10 69.7 169 30.2
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 7.0e-08 62.4 58 50.0
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 2.0e-07 60.8 114 41.2
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.5e-07 59.7 169 26.0


User provided reference genes

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