Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn082s42673 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.2e-88 329.7 153 100.0
CAN.G2141.5 Capsicum annuum HOM05D000216 ORTHO05D000634 2.5e-86 322.0 153 97.4
CAN.G481.11 Capsicum annuum HOM05D000216 ORTHO05D000634 2.5e-86 322.0 153 97.4
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.6e-85 319.3 151 96.7
Gorai.005G167700 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.8e-84 315.8 153 94.8
PGR111G0082 Punica granatum HOM05D000216 ORTHO05D000634 1.6e-82 309.3 144 97.9
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 6.3e-82 307.4 151 92.7
CAN.G219.18 Capsicum annuum HOM05D000216 ORTHO05D000634 8.2e-82 307.0 151 93.4
PSO548G0054 Papaver somniferum HOM05D000216 ORTHO05D000634 1.4e-81 306.2 144 95.8
Potri.013G140850 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.1e-81 305.1 144 95.8
DCAR_032475 Daucus carota HOM05D000216 ORTHO05D000634 4.1e-81 304.7 151 92.7
Atru.chr13.1918 Acer truncatum HOM05D000216 ORTHO05D000634 5.3e-81 304.3 146 94.5
ATCG00180 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 5.3e-81 304.3 144 95.8
LjContig00318g0019842 Lotus japonicus HOM05D000216 ORTHO05D000634 1.2e-80 303.1 145 94.5
MELO3C027102.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.6e-80 302.0 145 95.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 4.5e-80 301.2 141 97.2
Sed0024913 Sechium edule HOM05D000216 ORTHO05D000634 7.7e-80 300.4 144 95.1
Sed0025165 Sechium edule HOM05D000216 ORTHO05D000634 7.7e-80 300.4 144 95.1
arahy.Tifrunner.gnm1.ann1.YJD706 Arachis hypogaea HOM05D000216 ORTHO05D000634 2.2e-79 298.9 146 93.2
BolSC37t60766H Brassica oleracea HOM05D000216 ORTHO05D000634 2.9e-79 298.5 145 93.8
BolSC45t60875H Brassica oleracea HOM05D000216 ORTHO05D000634 2.9e-79 298.5 145 93.8
BolSC45t60939H Brassica oleracea HOM05D000216 ORTHO05D000634 2.9e-79 298.5 145 93.8
BraSC140t45586Z Brassica rapa HOM05D000216 ORTHO05D000634 2.9e-79 298.5 145 93.8
BraSC58t46407Z Brassica rapa HOM05D000216 ORTHO05D000634 2.9e-79 298.5 145 93.8
BNapus_Darmor_BZH_scaffold_253p00070 Brassica napus HOM05D000216 ORTHO05D000634 8.5e-79 297.0 144 93.8
Medtr3g062770 Medicago truncatula HOM05D000216 ORTHO05D000634 8.5e-79 297.0 145 91.7
Medtr3g062790 Medicago truncatula HOM05D000216 ORTHO05D000634 8.5e-79 297.0 145 91.7
HanXRQChr13g0417241 Helianthus annuus HOM05D000216 ORTHO05D001131 1.9e-78 295.8 152 89.5
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.5e-78 295.4 152 88.8
HanXRQChr00c0823g0577611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.5e-78 294.3 150 90.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 5.5e-78 294.3 150 90.0
RcHm_v2.0_Chr2g0102161 Rosa chinensis HOM05D000216 ORTHO05D000634 9.4e-78 293.5 145 93.1
Lalb_Chr09g0335401 Lupinus albus HOM05D000216 ORTHO05D000634 2.1e-77 292.4 146 91.1
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 4.6e-77 291.2 150 87.3
Hund27655 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.3e-76 288.9 144 89.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.3e-76 288.9 144 89.6
Psat7g026840 Pisum sativum HOM05D000216 ORTHO05D001131 6.7e-76 287.3 151 86.8
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 8.8e-76 287.0 150 86.7
Lsat_1_v5_gn_1_96161 Lactuca sativa HOM05D000216 ORTHO05D000634 5.7e-75 284.3 145 89.0
Lsat_1_v5_gn_8_1820 Lactuca sativa HOM05D000216 ORTHO05D000634 5.7e-75 284.3 145 89.0
Sed0020606 Sechium edule HOM05D000216 ORTHO05D000634 1.7e-74 282.7 140 92.1
BraSC140t45599Z Brassica rapa HOM05D000216 ORTHO05D000634 3.4e-72 275.0 135 92.6
CSS0028306 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D000634 5.0e-71 271.2 148 85.8
Lalb_Chr24g0400921 Lupinus albus HOM05D000216 ORTHO05D000634 3.7e-66 255.0 146 83.6
LjContig00489g0016986 Lotus japonicus HOM05D000216 ORTHO05D000634 1.2e-64 250.0 145 83.4
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.1e-59 233.4 130 81.5
Lsat_1_v5_gn_1_118640 Lactuca sativa HOM05D000216 ORTHO05D000634 2.8e-58 228.8 113 91.2
Oeu062866.1 Olea europaea HOM05D000216 ORTHO05D000634 1.5e-54 216.5 106 93.4
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.0e-52 210.3 105 90.5
BraSC151t45702Z Brassica rapa HOM05D000216 ORTHO05D000634 1.0e-44 183.7 90 91.1
Migut.D01343 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.0e-44 183.7 128 69.5
arahy.Tifrunner.gnm1.ann1.F4653T Arachis hypogaea HOM05D000216 ORTHO05D000634 1.2e-43 180.3 97 84.5
Solyc12g035870.3 Solanum lycopersicum HOM05D000216 ORTHO05D001131 3.4e-43 178.7 94 81.9
ATR0227G001 Amborella trichopoda HOM05D000216 ORTHO05D001131 9.8e-43 177.2 93 87.1
Solyc01g017370.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.0e-41 171.0 95 80.0
SMO168G0002 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 8.0e-37 157.5 148 51.4
Gohir.D13G173125 Gossypium hirsutum HOM05D000216 ORTHO05D000634 6.8e-36 154.5 80 85.0
Gorai.004G101400 Gossypium raimondii HOM05D000216 ORTHO05D001131 8.9e-36 154.1 77 93.5
HanXRQChr00c0994g0578191 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-35 152.9 75 90.7
Potri.019G027860 Populus trichocarpa HOM05D000216 ORTHO05D000634 2.0e-35 152.9 71 97.2
GSVIVG01000405001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.1e-33 147.1 72 90.3
Gohir.D08G095620 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.8e-33 146.4 77 89.6
SMO086G0006 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 9.2e-33 144.1 164 45.1
BolSC44t60848H Brassica oleracea HOM05D000216 ORTHO05D000634 2.3e-31 139.4 66 93.9
Gorai.009G384300 Gossypium raimondii HOM05D000216 ORTHO05D000634 2.5e-30 136.0 79 77.2
arahy.Tifrunner.gnm1.ann1.ITK2CB Arachis hypogaea HOM05D000388 ORTHO05D000473 5.6e-30 134.8 69 85.5
Gorai.013G187400 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.0e-28 128.6 65 86.2
Gorai.008G086500 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.2e-28 128.3 69 82.6
CARHR181340 Cardamine hirsuta HOM05D000216 ORTHO05D000634 2.6e-27 125.9 66 81.8
Nitab4.5_0000172g0250 Nicotiana tabacum HOM05D000216 ORTHO05D001131 4.4e-27 125.2 74 79.7
Mapoly0093s0044 Marchantia polymorpha HOM05D000216 ORTHO05D000634 3.2e-25 119.0 77 71.4
Migut.K00995 Erythranthe guttata HOM05D000216 ORTHO05D000634 7.0e-25 117.9 65 83.1
C02p28760 Brassica napus HOM05D000216 ORTHO05D000634 9.2e-25 117.5 62 79.0
FAN17G2339 Fragaria x ananassa HOM05D000216 ORTHO05D000634 9.2e-25 117.5 54 100.0
Mapoly0093s0045 Marchantia polymorpha HOM05D000216 ORTHO05D000634 2.0e-24 116.3 76 69.7
Migut.D01416 Erythranthe guttata HOM05D000216 ORTHO05D000634 3.5e-24 115.5 57 87.7
Pp3c19_12990 Physcomitrium patens HOM05D000216 ORTHO05D000634 7.3e-22 107.8 82 63.4
Gorai.008G192200 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.4e-19 99.0 56 78.6
Gohir.D12G179260 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.1e-17 94.0 61 70.5
BolC7t41733H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-17 93.2 42 97.6
BolSC49t61197H Brassica oleracea HOM05D000216 ORTHO05D000634 1.9e-17 93.2 42 97.6
HanXRQChr10g0282571 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-16 89.7 50 84.0
Oeu054668.1 Olea europaea HOM05D000445 ORTHO05D000634 2.7e-16 89.4 42 88.1
Solyc12g062560.1 Solanum lycopersicum HOM05D001133 ORTHO05D000941 3.9e-15 85.5 89 47.2
Medtr8g018880 Medicago truncatula HOM05D000216 ORTHO05D000634 1.1e-14 84.0 50 76.0
Hund21335 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.3e-14 82.4 41 87.8
Solyc07g021200.1 Solanum lycopersicum HOM05D001133 ORTHO05D000941 3.1e-12 75.9 41 78.0
Solyc12g062563.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.1e-12 75.9 42 78.6
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-11 73.9 39 89.7
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-11 73.9 39 89.7
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.2e-11 73.9 39 89.7
Solyc07g021205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.6e-11 71.2 41 70.7
HanXRQChr00c0994g0578181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.0e-07 60.8 29 89.7


User provided reference genes

Program Settings