Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000508g0010 Nicotiana tabacum HOM05D000399 ORTHO05D000304 1.1e-50 203.0 101 100.0
Nitab4.5_0017941g0010 Nicotiana tabacum HOM05D000399 ORTHO05D017712 1.1e-50 203.0 101 100.0
Solyc08g067210.3 Solanum lycopersicum HOM05D000399 ORTHO05D000304 7.6e-44 180.3 101 88.1
Sopen08g021150 Solanum pennellii HOM05D000399 ORTHO05D000304 1.3e-43 179.5 101 87.1
Peaxi162Scf00922g00316 Petunia axillaris HOM05D000399 ORTHO05D000304 1.3e-40 169.5 101 82.2
Dinv40935 Davidia involucrata HOM05D000399 ORTHO05D000304 9.0e-37 156.8 98 76.5
Hma1.2p1_1509F.1_g287800 Hydrangea macrophylla HOM05D000399 ORTHO05D017712 5.0e-35 151.0 101 71.3
ECA236G2155 Erigeron canadensis HOM05D000399 ORTHO05D000304 2.1e-33 145.6 97 73.2
Lsat_1_v5_gn_8_70500 Lactuca sativa HOM05D000399 ORTHO05D000304 2.1e-33 145.6 98 69.4
TAR624G0949 Trochodendron aralioides HOM05D000399 ORTHO05D000304 6.1e-33 144.1 99 68.7
Actinidia16900 Actinidia chinensis HOM05D000399 ORTHO05D000304 5.1e-32 141.0 97 69.1
AUR62013883 Chenopodium quinoa HOM05D000399 ORTHO05D000304 6.7e-32 140.6 95 70.5
CiPaw.14G040900 Carya illinoinensis HOM05D000399 ORTHO05D000304 1.1e-31 139.8 100 68.0
Hma1.2p1_0664F.1_g198960 Hydrangea macrophylla HOM05D000399 ORTHO05D017712 1.5e-31 139.4 113 62.8
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.9e-31 139.0 93 71.0
vmacro18656 Vaccinium macrocarpon HOM05D000399 ORTHO05D000304 4.3e-31 137.9 98 66.3
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 7.4e-31 137.1 96 64.6
CSS0038361 Camellia sinensis var. sinensis HOM05D000399 ORTHO05D017712 9.7e-31 136.7 94 69.1
Migut.E01470 Erythranthe guttata HOM05D000399 ORTHO05D000304 2.2e-30 135.6 98 68.4
Sc06g0000120 Simmondsia chinensis HOM05D000399 ORTHO05D000304 2.2e-30 135.6 100 64.0
Thecc.09G065600 Theobroma cacao HOM05D000399 ORTHO05D000304 2.2e-30 135.6 100 64.0
Lsat_1_v5_gn_8_70401 Lactuca sativa HOM05D000399 ORTHO05D000304 6.3e-30 134.0 98 64.3
GSVIVG01035494001 Vitis vinifera HOM05D000399 ORTHO05D000304 8.2e-30 133.7 97 67.0
Rhsim08G0003600 Rhododendron simsii HOM05D000399 ORTHO05D000304 1.4e-29 132.9 98 65.3
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 3.1e-29 131.7 94 63.8
Duzib150G0526 Durio zibethinus HOM05D000399 ORTHO05D000304 1.2e-28 129.8 100 60.0
Lj7C209T3 Lonicera japonica HOM05D000399 ORTHO05D000304 1.2e-28 129.8 97 62.9
Gohir.A06G080450 Gossypium hirsutum HOM05D000399 ORTHO05D000304 1.5e-28 129.4 96 62.5
Gohir.D06G080000 Gossypium hirsutum HOM05D000399 ORTHO05D000304 1.5e-28 129.4 96 62.5
Gorai.010G093100 Gossypium raimondii HOM05D000399 ORTHO05D000304 1.5e-28 129.4 96 62.5
Ah.11g040220 Amaranthus hybridus HOM05D000399 ORTHO05D000304 2.6e-28 128.6 96 63.5
Aqoxy7G04095 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 2.6e-28 128.6 96 61.5
ClCG08G009740 Citrullus lanatus HOM05D000399 ORTHO05D000304 4.5e-28 127.9 101 61.4
HanXRQChr13g0398971 Helianthus annuus HOM05D000399 ORTHO05D000304 1.0e-27 126.7 96 61.5
Sabra06G0168700 Salix brachista HOM05D000399 ORTHO05D000304 1.7e-27 125.9 98 58.2
Ciclev10007239m.g Citrus clementina HOM05D000399 ORTHO05D000304 2.2e-27 125.6 101 58.4
CsaV3_6G031860 Cucumis sativus L. HOM05D000399 ORTHO05D000304 2.9e-27 125.2 101 58.4
Aqoxy2G01226 Aquilegia oxysepala HOM05D000399 ORTHO05D000304 3.8e-27 124.8 96 61.5
Potri.018G047500 Populus trichocarpa HOM05D000399 ORTHO05D000304 5.0e-27 124.4 96 59.4
PGR044G1905 Punica granatum HOM05D000399 ORTHO05D000304 5.0e-27 124.4 97 58.8
ECA236G2027 Erigeron canadensis HOM05D000399 ORTHO05D017712 6.5e-27 124.0 98 62.2
Nn8g38601 Nelumbo nucifera HOM05D000399 ORTHO05D000304 6.5e-27 124.0 99 61.6
Prupe.1G401900 Prunus persica HOM05D000399 ORTHO05D000304 8.5e-27 123.6 98 63.3
Cc08_g06770 Coffea canephora HOM05D000399 ORTHO05D017712 1.1e-26 123.2 101 58.4
HanXRQChr05g0136441 Helianthus annuus HOM05D000399 ORTHO05D000304 1.9e-26 122.5 96 61.5
Eucgr.C03173 Eucalyptus grandis HOM05D000399 ORTHO05D000304 2.5e-26 122.1 101 57.4
Manes.03G056500 Manihot esculenta HOM05D000399 ORTHO05D000304 2.5e-26 122.1 99 56.6
Sed0007965 Sechium edule HOM05D000399 ORTHO05D000304 2.5e-26 122.1 97 61.9
TWI63G1283 Tripterygium wilfordii HOM05D000399 ORTHO05D000304 4.2e-26 121.3 98 55.1
DCAR_001243 Daucus carota HOM05D000399 ORTHO05D000304 9.4e-26 120.2 101 56.4
ECA236G0176 Erigeron canadensis HOM05D000399 ORTHO05D000304 9.4e-26 120.2 97 62.9
Atru.chr7.1826 Acer truncatum HOM05D000399 ORTHO05D000304 1.6e-25 119.4 101 54.5
RcHm_v2.0_Chr6g0284721 Rosa chinensis HOM05D000399 ORTHO05D000304 6.1e-25 117.5 96 59.4
arahy.Tifrunner.gnm1.ann1.79WVX3 Arachis hypogaea HOM05D000399 ORTHO05D000304 7.9e-25 117.1 99 57.6
arahy.Tifrunner.gnm1.ann1.ZWX69H Arachis hypogaea HOM05D000399 ORTHO05D000304 7.9e-25 117.1 97 59.8
QL09p054073 Quercus lobata HOM05D000399 ORTHO05D000304 7.9e-25 117.1 98 56.1
Prupe.8G202000 Prunus persica HOM05D000399 ORTHO05D000304 1.0e-24 116.7 97 58.8
MBI16_g41119_MAGBIO Magnolia biondii HOM05D000399 ORTHO05D000304 1.4e-24 116.3 94 60.6
Glyma.04G057400 Glycine max HOM05D000399 ORTHO05D000304 3.0e-24 115.2 97 59.8
PSO135G0437 Papaver somniferum HOM05D000399 ORTHO05D000304 3.0e-24 115.2 99 57.6
SGA_v2.0_scaffold169G38611 Striga asiatica HOM05D000399 ORTHO05D000304 3.0e-24 115.2 103 57.3
FvH4_2g18930 Fragaria vesca HOM05D000399 ORTHO05D000304 3.9e-24 114.8 96 57.3
FAN24G1392 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.9e-24 114.8 96 57.3
SalBow8G4851 Salvia bowleyana HOM05D000399 ORTHO05D000304 6.7e-24 114.0 98 59.2
SalBow8G2542 Salvia bowleyana HOM05D000399 ORTHO05D000304 8.8e-24 113.6 98 58.2
Lalb_Chr23g0268041 Lupinus albus HOM05D000399 ORTHO05D000304 1.5e-23 112.8 97 57.7
Phvul.009G083800 Phaseolus vulgaris HOM05D000399 ORTHO05D000304 1.5e-23 112.8 97 58.8
Oeu030209.1 Olea europaea HOM05D000399 ORTHO05D000304 2.0e-23 112.5 94 58.5
SalBow8G0161 Salvia bowleyana HOM05D000399 ORTHO05D000304 2.5e-23 112.1 98 58.2
Gohir.D13G195300 Gossypium hirsutum HOM05D000399 ORTHO05D000304 3.3e-23 111.7 95 53.7
MD15G1047500 Malus domestica HOM05D000399 ORTHO05D000304 4.3e-23 111.3 98 52.0
PSO724G0698 Papaver somniferum HOM05D000399 ORTHO05D000304 5.7e-23 110.9 99 55.6
Psat5g034960 Pisum sativum HOM05D000399 ORTHO05D000304 5.7e-23 110.9 99 58.6
COL.COLO4_21161 Corchorus olitorius HOM05D000399 ORTHO05D000304 1.3e-22 109.8 102 56.9
Gorai.013G221400 Gossypium raimondii HOM05D000399 ORTHO05D000304 1.7e-22 109.4 95 53.7
Medtr3g105390 Medicago truncatula HOM05D000399 ORTHO05D000304 1.7e-22 109.4 96 55.2
VMungo1309G2494 Vigna mungo HOM05D000399 ORTHO05D000304 2.2e-22 109.0 96 56.2
RcHm_v2.0_Chr6g0312121 Rosa chinensis HOM05D000399 ORTHO05D000304 8.2e-22 107.1 98 58.2
DCAR_004371 Daucus carota HOM05D000399 ORTHO05D000304 1.1e-21 106.7 95 51.6
TPR.G3571 Trifolium pratense HOM05D000399 ORTHO05D000304 4.1e-21 104.8 95 52.6
unitig_37.g12915 Utricularia gibba HOM05D000399 ORTHO05D000304 6.9e-21 104.0 99 52.5
Ca_15808_v3 Cicer arietinum L. HOM05D000399 ORTHO05D000304 1.2e-20 103.2 96 55.2
FvH4_2g07790 Fragaria vesca HOM05D000399 ORTHO05D000304 2.0e-20 102.4 98 57.1
FAN24G2100 Fragaria x ananassa HOM05D000399 ORTHO05D000304 2.0e-20 102.4 98 56.1
Os01g0909200 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 2.0e-20 102.4 95 58.9
MD08G1046300 Malus domestica HOM05D000399 ORTHO05D000304 2.6e-20 102.1 97 50.5
FAN15G0842 Fragaria x ananassa HOM05D000399 ORTHO05D000304 4.5e-20 101.3 98 57.1
Lj1g0021094 Lotus japonicus HOM05D000399 ORTHO05D000304 4.5e-20 101.3 99 51.5
FvH4_2g30780 Fragaria vesca HOM05D000399 ORTHO05D000304 1.0e-19 100.1 98 54.1
FAN24G1462 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.0e-19 100.1 98 54.1
FAN27G0604 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.0e-19 100.1 98 54.1
AT3G43920 Arabidopsis thaliana HOM05D000399 ORTHO05D000304 1.7e-19 99.4 97 50.5
BraA06t25613Z Brassica rapa HOM05D000399 ORTHO05D000304 2.2e-19 99.0 99 48.5
Haze_03339 Corylus avellana HOM05D000399 ORTHO05D000304 2.2e-19 99.0 95 55.8
Zm00001eb143950 Zea mays HOM05D000399 ORTHO05D000304 2.2e-19 99.0 93 58.1
FAN15G1291 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.8e-19 98.2 80 60.0
BcaB02g10763 Brassica carinata HOM05D000399 ORTHO05D000304 5.0e-19 97.8 92 50.0
Carub.0005s0970 Capsella rubella HOM05D000399 ORTHO05D000304 5.0e-19 97.8 92 50.0
FAN15G0102 Fragaria x ananassa HOM05D000399 ORTHO05D000304 5.0e-19 97.8 98 53.1
AL5G21950 Arabidopsis lyrata HOM05D000399 ORTHO05D000304 6.5e-19 97.4 96 49.0
CDE02G0393 Ceratophyllum demersum HOM05D000399 ORTHO05D000304 6.5e-19 97.4 97 47.4
Sp5g17310 Schrenkiella parvula HOM05D000399 ORTHO05D000304 6.5e-19 97.4 92 51.1
HPP92_000547 Vanilla planifolia HOM05D000399 ORTHO05D000304 8.5e-19 97.1 97 50.5
FAN20G1611 Fragaria x ananassa HOM05D000399 ORTHO05D000304 1.1e-18 96.7 98 53.1
Aa31LG4G13570 Aethionema arabicum HOM05D000399 ORTHO05D000304 1.4e-18 96.3 97 49.5
BcaC01g02230 Brassica carinata HOM05D000399 ORTHO05D000304 1.4e-18 96.3 92 50.0
A06p26820 Brassica napus HOM05D000399 ORTHO05D000304 1.4e-18 96.3 92 50.0
C03p67620 Brassica napus HOM05D000399 ORTHO05D000304 1.4e-18 96.3 92 50.0
BolSC21t60260H Brassica oleracea HOM05D000399 ORTHO05D000304 1.4e-18 96.3 92 50.0
CARHR049880 Cardamine hirsuta HOM05D000399 ORTHO05D000304 1.9e-18 95.9 92 47.8
Carub.0005s0966 Capsella rubella HOM05D000399 ORTHO05D000304 2.5e-18 95.5 92 48.9
Thhalv10010061m.g Eutrema salsugineum HOM05D000399 ORTHO05D000304 3.2e-18 95.1 92 50.0
FAN20G0677 Fragaria x ananassa HOM05D000399 ORTHO05D000304 4.2e-18 94.7 98 55.1
THA.LOC104815087 Tarenaya hassleriana HOM05D000399 ORTHO05D000304 7.2e-18 94.0 97 44.3
Potri.006G218850 Populus trichocarpa HOM05D000399 ORTHO05D017712 2.3e-16 89.0 68 54.4
FAN27G2851 Fragaria x ananassa HOM05D000399 ORTHO05D000304 3.9e-16 88.2 92 52.2
Os10g0485600 Oryza sativa ssp. japonica HOM05D000399 ORTHO05D000304 2.6e-15 85.5 90 46.7
ATR0767G233 Amborella trichopoda HOM05D000399 ORTHO05D000304 2.6e-12 75.5 97 45.4
SEGI_32807 Sequoiadendron giganteum HOM05D000399 ORTHO05D017712 8.8e-08 60.5 101 32.7
Cfa010390 Carpinus fangiana HOM05D000399 ORTHO05D000304 2.8e-06 55.5 32 71.9


User provided reference genes

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