Gene: SalBow8G0161
General Information
Structural Information
- Species Salvia bowleyana
- Gene Identifier SalBow8G0161
- Transcript Identifier SalBow8G0161.1
- Gene Type Coding gene
- Location GWHASIU00000004 : 5701973-5710951 : positive
Gene Family Information
- ID HOM05D000399
- #Genes/#Species 1254/98
- Phylogenetic origin
- ID ORTHO05D000304
- #Genes/#Species 1156/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name NDS_037863
- Accession GWHGASIU022352
- Accession GWHTASIU022405
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing | |
| GO:0051214 | ISO | PLAZA Integrative Orthology | RNAi-mediated antiviral immunity against RNA virus | AT3G43920 |
| GO:0007275 | ISO | PLAZA Integrative Orthology | multicellular organism development | Os03g0121800 |
| GO:0035196 | ISO | PLAZA Integrative Orthology | production of miRNAs involved in gene silencing by miRNA | AT3G43920 |
| GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | Solyc08g067210.3 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT3G43920 |
| GO:0010216 | ISO | PLAZA Integrative Orthology | maintenance of DNA methylation | AT3G43920 |
| GO:0030422 | ISO | PLAZA Integrative Orthology | production of siRNA involved in RNA interference | AT3G43920 |
| GO:0010267 | ISO | PLAZA Integrative Orthology | production of ta-siRNAs involved in RNA interference | AT3G43920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004525 | IEA | InterPro | ribonuclease III activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003725 | ISO | PLAZA Integrative Orthology | double-stranded RNA binding | AT3G43920 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G43920 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT3G43920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000999 | Ribonuclease III domain |
| IPR038248 | Dicer dimerisation domain superfamily |
| IPR003100 | PAZ domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR036389 | Ribonuclease III, endonuclease domain superfamily |
| IPR036085 | PAZ domain superfamily |
| IPR011545 | DEAD/DEAH box helicase domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |