Gene: ATR0767G233

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0767G233
  • Transcript Identifier ATR0767G233.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00033 : 1718698-1811272 : negative

Gene Family Information

  • ID HOM05D000399
  • #Genes/#Species 1254/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00033.66.v1.0
  • pacid 31561941

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0051214
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immunity against RNA virus AT3G43920
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT3G43920
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc08g067210.3
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G43920
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation AT3G43920
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT3G43920
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT3G43920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004525
IEA
InterProribonuclease III activity
GO:0005515
IEA
InterProprotein binding
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0016787
IEA
InterProhydrolase activity
GO:0003725
ISO
PLAZA Integrative Orthologydouble-stranded RNA binding AT3G43920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G43920
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G43920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036389 Ribonuclease III, endonuclease domain superfamily
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR000999 Ribonuclease III domain
IPR036085 PAZ domain superfamily
IPR038248 Dicer dimerisation domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR003100 PAZ domain
IPR006935 Helicase/UvrB, N-terminal
Mapman id Description
12.5.1.8 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.endoribonuclease (DCL3)