Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.7e-262 909.1 432 100.0
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 4.3e-242 841.3 432 94.2
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 9.7e-218 760.4 455 83.1
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 6.5e-214 747.7 448 82.8
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 6.5e-214 747.7 447 82.3
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 8.5e-214 747.3 447 82.1
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 3.2e-205 718.8 448 77.2
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 9.4e-205 717.2 447 78.3
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 9.4e-205 717.2 448 77.9
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 2.6e-202 709.1 447 77.6
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 1.1e-200 703.7 449 77.1
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 2.4e-200 702.6 464 74.6
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 3.1e-200 702.2 442 77.4
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 4.1e-200 701.8 447 75.8
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 4.1e-200 701.8 449 76.6
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 1.2e-199 700.3 451 75.4
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 3.5e-199 698.7 449 75.7
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 1.3e-198 696.8 450 75.8
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 1.5e-197 693.3 452 74.6
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 5.5e-197 691.4 448 75.0
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 9.4e-197 690.6 452 75.9
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.2e-196 690.3 448 76.3
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 2.1e-196 689.5 446 74.9
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 8.0e-196 687.6 452 74.6
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 2.3e-195 686.0 460 74.8
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 2.3e-195 686.0 455 76.3
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 2.3e-195 686.0 451 76.3
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 8.8e-195 684.1 451 74.5
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 8.8e-195 684.1 452 74.8
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 1.1e-194 683.7 445 76.4
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 2.0e-194 682.9 448 73.9
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 2.6e-194 682.6 452 74.6
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 5.7e-194 681.4 450 74.7
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 7.5e-194 681.0 452 74.3
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 4.8e-193 678.3 451 73.6
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 1.1e-192 677.2 467 72.8
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 1.4e-192 676.8 453 73.3
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 4.1e-192 675.2 463 72.6
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 5.3e-192 674.9 449 73.1
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 5.3e-192 674.9 448 74.6
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 1.2e-191 673.7 456 72.6
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 1.2e-191 673.7 456 72.6
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 1.2e-191 673.7 448 74.1
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 3.5e-191 672.2 487 69.2
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 4.5e-191 671.8 450 72.4
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 2.2e-190 669.5 455 73.8
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 1.1e-189 667.2 414 77.5
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 1.1e-189 667.2 453 73.1
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 1.9e-189 666.4 453 73.1
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 2.5e-189 666.0 454 72.9
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 3.2e-189 665.6 458 72.7
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 9.4e-189 664.1 449 73.1
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.1e-188 662.9 455 73.4
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 8.0e-188 661.0 455 73.2
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 1.4e-187 660.2 454 73.3
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 5.2e-187 658.3 423 76.1
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 6.8e-187 657.9 456 73.0
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 6.3e-185 651.4 447 73.6
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 1.8e-184 649.8 448 72.8
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 5.4e-184 648.3 490 66.7
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 2.0e-183 646.4 451 72.3
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 1.9e-181 639.8 486 67.7
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 3.4e-178 629.0 452 69.0
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 1.7e-177 626.7 454 69.4
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 1.7e-177 626.7 447 70.2
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 8.3e-177 624.4 453 70.9
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 8.3e-177 624.4 453 70.4
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 9.2e-176 620.9 457 68.9
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 1.6e-175 620.2 454 70.0
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 2.9e-174 615.9 447 69.1
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 6.6e-174 614.8 460 68.9
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 9.5e-173 610.9 418 73.0
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 5.7e-170 601.7 451 66.7
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 1.4e-168 597.0 453 68.4
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 7.0e-168 594.7 452 66.2
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 2.7e-167 592.8 382 77.2
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.0e-166 590.9 441 66.7
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 2.5e-165 586.3 450 65.1
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 4.3e-165 585.5 449 66.1
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 9.5e-165 584.3 452 64.8
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 2.1e-164 583.2 452 64.8
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 6.2e-164 581.6 454 64.8
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 1.0e-163 580.9 455 64.8
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 2.6e-162 576.2 451 64.5
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 4.4e-162 575.5 450 64.2
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 4.4e-162 575.5 454 64.1
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 5.8e-162 575.1 408 71.1
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 2.2e-161 573.2 466 62.9
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 2.2e-161 573.2 466 62.9
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 2.9e-161 572.8 454 63.9
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 2.0e-159 566.6 390 72.8
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 4.3e-157 558.9 450 64.7
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 2.8e-156 556.2 450 62.9
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 4.7e-156 555.4 452 62.8
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 6.2e-156 555.1 417 68.8
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 3.4e-154 549.3 452 62.2
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 7.5e-154 548.1 417 66.9
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 1.3e-153 547.4 458 62.2
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 8.3e-153 544.7 421 67.0
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 4.1e-152 542.3 470 60.6
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 9.2e-152 541.2 422 64.7
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.2e-151 540.8 450 62.7
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.6e-148 530.4 450 63.1
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 2.3e-147 526.6 426 63.6
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 8.9e-147 524.6 450 60.0
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 2.1e-143 513.5 318 77.0
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 3.6e-140 502.7 338 73.7
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 3.1e-139 499.6 336 73.5
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 4.6e-135 485.7 355 68.5
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 4.5e-122 442.6 350 64.6
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 1.2e-119 434.5 312 68.9
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 5.8e-114 415.6 324 66.0
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 4.9e-113 412.5 461 52.7
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 2.2e-105 387.1 323 61.3
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 1.9e-104 384.0 433 49.0
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 1.0e-102 378.3 482 45.6
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 1.8e-102 377.5 324 58.0
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 2.2e-100 370.5 249 71.9
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 9.1e-99 365.2 394 50.0
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 1.3e-97 361.3 222 78.8
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 1.5e-90 337.8 356 47.5
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 2.8e-84 317.0 231 72.7
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 2.2e-73 280.8 454 41.2
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 9.5e-64 248.8 290 50.3
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 4.0e-62 243.4 155 74.8
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 5.9e-58 229.6 254 51.6
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 4.0e-46 190.3 165 63.0
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 4.1e-43 180.3 145 65.5
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 2.6e-37 161.0 104 75.0
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 7.1e-35 152.9 107 72.0
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 3.8e-28 130.6 79 81.0
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 2.4e-27 127.9 321 32.4
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 7.8e-18 96.3 272 32.0
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 2.5e-16 91.3 50 78.0
ECA233G4689 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.8e-14 85.1 83 55.4
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 3.1e-14 84.3 48 79.2
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 1.7e-12 78.6 43 76.7
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 3.0e-09 67.8 29 93.1
Psat6g107920 Pisum sativum HOM05D032184 ORTHO05D330502 3.1e-06 57.8 28 89.3


User provided reference genes

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