Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 5.2e-296 1020.8 722 100.0
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 6.6e-206 721.5 722 79.2
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 1.2e-186 657.5 715 72.6
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 2.0e-186 656.8 724 72.8
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 7.1e-184 648.3 724 71.8
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 3.9e-182 642.5 724 71.8
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.2e-178 630.9 719 71.1
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 6.5e-137 492.3 631 53.9
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 8.8e-126 455.3 772 52.2
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 1.9e-112 411.0 638 60.0
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 1.9e-112 411.0 668 59.3
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.5e-104 384.0 723 56.4
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.0e-102 378.6 709 56.0
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 3.7e-100 370.2 712 56.5
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 3.7e-100 370.2 706 55.9
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 3.8e-97 360.1 712 55.2
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 8.6e-97 359.0 719 55.1
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 3.3e-96 357.1 722 54.0
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 7.2e-96 355.9 712 54.5
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 4.4e-93 346.7 605 59.3
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 1.4e-91 341.7 669 55.0
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 2.0e-90 337.8 716 53.4
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 2.7e-90 337.4 722 53.6
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 4.6e-90 336.7 721 53.7
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 1.7e-89 334.7 720 52.1
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.9e-89 333.6 718 53.3
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 5.0e-89 333.2 719 53.4
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 8.6e-89 332.4 719 53.1
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 7.3e-88 329.3 687 53.7
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 1.0e-86 325.5 688 54.9
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 2.3e-86 324.3 719 53.0
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 2.3e-86 324.3 714 52.7
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 3.1e-86 323.9 703 52.8
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 6.8e-86 322.8 712 52.2
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 6.8e-86 322.8 715 53.1
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 8.9e-86 322.4 717 51.6
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 1.5e-85 321.6 717 52.6
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 2.0e-85 321.2 696 53.7
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 3.4e-85 320.5 713 53.0
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 5.8e-85 319.7 724 53.3
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 4.1e-83 313.5 606 56.3
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 9.2e-83 312.4 712 51.8
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 6.0e-82 309.7 577 57.9
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 6.0e-82 309.7 616 54.5
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.7e-81 308.1 716 51.8
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 2.3e-81 307.8 719 50.9
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 6.6e-81 306.2 616 57.8
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 3.3e-80 303.9 716 50.4
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 9.5e-80 302.4 704 51.6
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 9.5e-80 302.4 723 50.6
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 2.8e-79 300.8 577 57.0
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.8e-79 300.8 555 60.2
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 2.8e-79 300.8 713 51.5
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 8.1e-79 299.3 698 51.1
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 1.1e-78 298.9 555 60.0
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 5.2e-78 296.6 583 57.6
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 1.5e-77 295.0 704 51.6
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 2.0e-77 294.7 703 50.9
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 2.0e-77 294.7 714 50.1
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 7.5e-77 292.7 698 50.9
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 7.5e-77 292.7 698 50.9
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 3.7e-76 290.4 686 52.5
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 4.9e-76 290.0 700 50.7
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 6.4e-76 289.7 703 50.8
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 8.3e-76 289.3 697 51.4
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 8.3e-76 289.3 697 51.2
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 1.1e-75 288.9 704 50.0
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 1.1e-75 288.9 678 51.6
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 1.4e-75 288.5 707 51.3
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.9e-75 288.1 699 52.1
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 5.4e-75 286.6 696 51.1
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 5.4e-75 286.6 607 55.0
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 5.4e-75 286.6 729 48.4
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 7.1e-75 286.2 711 50.1
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 9.2e-75 285.8 707 51.2
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 9.2e-75 285.8 716 49.0
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 2.7e-74 284.3 706 50.7
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 4.6e-74 283.5 663 51.4
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 7.8e-74 282.7 706 50.4
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 3.9e-73 280.4 689 51.8
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 3.9e-73 280.4 654 52.0
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 6.6e-73 279.6 702 50.4
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 8.6e-73 279.3 573 56.9
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 2.5e-72 277.7 687 51.4
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 7.3e-72 276.2 561 57.6
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 2.0e-69 268.1 712 49.0
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.3e-68 265.4 517 56.1
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 1.4e-67 261.9 283 55.8
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 1.2e-66 258.8 716 49.4
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.2e-66 258.8 716 49.2
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 2.1e-66 258.1 599 53.8
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 2.7e-66 257.7 573 55.1
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 5.1e-65 253.4 709 43.6
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 1.5e-64 251.9 273 54.2
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 1.4e-59 235.3 179 80.4
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.9e-59 235.0 784 41.5
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 3.9e-57 227.3 279 50.2
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 9.0e-54 216.1 297 47.5
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 4.2e-51 207.2 150 64.0
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 1.2e-42 179.1 259 42.9
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.1e-42 178.3 254 42.9
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 4.6e-42 177.2 515 52.4
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 3.4e-37 161.0 114 64.9
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 2.9e-36 157.9 103 69.9
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 1.2e-34 152.5 163 48.5
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.0e-33 149.4 239 52.3
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 1.1e-32 146.0 116 58.6
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 1.6e-31 142.1 110 61.8
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 7.6e-29 133.3 238 39.9
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 1.9e-27 128.6 222 32.9
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.5e-24 118.2 112 58.9
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 1.4e-22 112.5 210 42.9
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 2.9e-20 104.8 123 43.9
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 6.5e-20 103.6 206 42.7
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 5.1e-17 94.0 117 41.0
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 6.7e-17 93.6 145 42.8
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 2.0e-16 92.0 403 46.9


User provided reference genes

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