Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010124g0010 Nicotiana tabacum HOM05D004503 ORTHO05D005460 5.4e-201 704.1 358 100.0
Nitab4.5_0002251g0070 Nicotiana tabacum HOM05D004503 ORTHO05D005460 2.3e-196 688.7 369 95.9
Sopen07g029580 Solanum pennellii HOM05D004503 ORTHO05D005460 2.3e-188 662.1 369 91.3
Solyc07g056220.3 Solanum lycopersicum HOM05D004503 ORTHO05D005460 4.0e-188 661.4 369 91.3
CAN.G585.22 Capsicum annuum HOM05D004503 ORTHO05D005460 2.0e-187 659.1 369 91.6
Peaxi162Scf00111g00222 Petunia axillaris HOM05D004503 ORTHO05D005460 4.9e-186 654.4 433 80.8
Thecc.01G170000 Theobroma cacao HOM05D004503 ORTHO05D005460 1.9e-182 642.5 369 88.3
Lj1C677T5 Lonicera japonica HOM05D004503 ORTHO05D005460 1.6e-181 639.4 362 89.2
Gohir.D07G189800 Gossypium hirsutum HOM05D004503 ORTHO05D005460 2.1e-181 639.0 369 88.3
Gohir.A07G183000 Gossypium hirsutum HOM05D004503 ORTHO05D005460 4.7e-181 637.9 369 88.1
Duzib138G1342 Durio zibethinus HOM05D004503 ORTHO05D005460 6.2e-181 637.5 369 87.8
Gorai.001G211500 Gossypium raimondii HOM05D004503 ORTHO05D005460 8.1e-181 637.1 367 88.0
Atru.chr6.2055 Acer truncatum HOM05D004503 ORTHO05D005460 1.1e-180 636.7 369 87.8
GSVIVG01020844001 Vitis vinifera HOM05D004503 ORTHO05D005460 8.9e-180 633.6 362 88.7
Dinv07955 Davidia involucrata HOM05D004503 ORTHO05D005460 1.5e-179 632.9 369 87.5
SGA_v2.0_scaffold70G23615 Striga asiatica HOM05D004503 ORTHO05D005460 2.0e-179 632.5 369 87.0
TWI14G0297 Tripterygium wilfordii HOM05D004503 ORTHO05D005460 3.4e-179 631.7 369 87.3
CiPaw.13G152400 Carya illinoinensis HOM05D004503 ORTHO05D005460 9.9e-179 630.2 362 88.4
Medtr0071s0030 Medicago truncatula HOM05D004503 ORTHO05D005460 9.9e-179 630.2 369 86.7
Medtr3g046640 Medicago truncatula HOM05D004503 ORTHO05D005460 9.9e-179 630.2 369 86.7
Manes.02G088300 Manihot esculenta HOM05D004503 ORTHO05D005460 1.3e-178 629.8 369 87.3
arahy.Tifrunner.gnm1.ann1.96CX7H Arachis hypogaea HOM05D004503 ORTHO05D005460 1.7e-178 629.4 369 86.4
arahy.Tifrunner.gnm1.ann1.S01VYL Arachis hypogaea HOM05D004503 ORTHO05D005460 1.7e-178 629.4 369 86.4
Cpa.g.sc648.4 Carica papaya HOM05D004503 ORTHO05D005460 1.7e-178 629.4 370 87.0
Migut.M00558 Erythranthe guttata HOM05D004503 ORTHO05D005460 2.9e-178 628.6 369 86.4
Glyma.18G109800 Glycine max HOM05D004503 ORTHO05D005460 2.9e-178 628.6 364 87.6
Prupe.3G176600 Prunus persica HOM05D004503 ORTHO05D005460 2.9e-178 628.6 369 87.0
Ca_14599_v3 Cicer arietinum L. HOM05D004503 ORTHO05D005460 1.4e-177 626.3 369 86.2
Actinidia12541 Actinidia chinensis HOM05D004503 ORTHO05D005460 2.4e-177 625.5 369 86.7
QL01p017640 Quercus lobata HOM05D004503 ORTHO05D005460 3.2e-177 625.2 368 86.1
MSTRG.6739 Avicennia marina HOM05D004503 ORTHO05D005460 4.1e-177 624.8 369 86.4
COL.COLO4_08894 Corchorus olitorius HOM05D004503 ORTHO05D005460 1.2e-176 623.2 386 83.2
Lalb_Chr07g0191281 Lupinus albus HOM05D004503 ORTHO05D005460 1.2e-176 623.2 364 86.0
VMungo0647G0468 Vigna mungo HOM05D004503 ORTHO05D005460 1.2e-176 623.2 364 86.8
TAR629G1355 Trochodendron aralioides HOM05D004503 ORTHO05D005460 1.6e-176 622.9 369 86.2
Lj6g0014906 Lotus japonicus HOM05D004503 ORTHO05D005460 2.1e-176 622.5 369 85.9
Phvul.006G022400 Phaseolus vulgaris HOM05D004503 ORTHO05D005460 2.1e-176 622.5 364 86.5
Psat5g185680 Pisum sativum HOM05D004503 ORTHO05D005460 2.1e-176 622.5 369 85.9
PGR042G1526 Punica granatum HOM05D004503 ORTHO05D005460 2.7e-176 622.1 369 86.2
DCAR_013322 Daucus carota HOM05D004503 ORTHO05D005460 6.0e-176 620.9 365 86.8
Glyma.08G307900 Glycine max HOM05D004503 ORTHO05D005460 6.0e-176 620.9 364 87.1
Ciclev10030701m.g Citrus clementina HOM05D004503 ORTHO05D005460 1.3e-175 619.8 369 86.7
MD17G1136200 Malus domestica HOM05D004503 ORTHO05D005460 1.3e-175 619.8 361 87.3
CSS0024997 Camellia sinensis var. sinensis HOM05D004503 ORTHO05D005460 1.7e-175 619.4 369 85.9
Oeu020048.5 Olea europaea HOM05D004503 ORTHO05D005460 3.9e-175 618.2 367 85.0
Sabra05G0155000 Salix brachista HOM05D004503 ORTHO05D005460 5.1e-175 617.8 367 84.7
Potri.005G204400 Populus trichocarpa HOM05D004503 ORTHO05D005460 6.6e-175 617.5 369 84.8
MBI10_g21107_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 1.6e-173 612.8 370 84.6
CANSAT64G0633 Cannabis sativa HOM05D004503 ORTHO05D005460 3.6e-173 611.7 362 85.1
ECA233G4498 Erigeron canadensis HOM05D004503 ORTHO05D005460 8.9e-172 607.1 369 83.5
CsaV3_4G031940 Cucumis sativus L. HOM05D004503 ORTHO05D005460 3.4e-171 605.1 369 84.0
Aqoxy1G01732 Aquilegia oxysepala HOM05D004503 ORTHO05D005460 5.8e-171 604.4 369 82.7
Potri.002G057800 Populus trichocarpa HOM05D004503 ORTHO05D005460 5.8e-171 604.4 369 83.7
PSO675G5402 Papaver somniferum HOM05D004503 ORTHO05D005460 7.6e-171 604.0 362 84.8
MELO3C026971.2 Cucumis melo HOM05D004503 ORTHO05D005460 9.9e-171 603.6 369 84.0
Cc05_g09730 Coffea canephora HOM05D004503 ORTHO05D005460 3.8e-170 601.7 369 83.5
Sc09g0009430 Simmondsia chinensis HOM05D004503 ORTHO05D005460 8.4e-170 600.5 360 84.7
HanXRQChr13g0387771 Helianthus annuus HOM05D004503 ORTHO05D005460 2.1e-168 595.9 369 81.8
Lsat_1_v5_gn_8_31680 Lactuca sativa HOM05D004503 ORTHO05D005460 2.1e-168 595.9 365 81.4
AUR62026613 Chenopodium quinoa HOM05D004503 ORTHO05D005460 7.8e-168 594.0 362 82.6
THA.LOC104826541 Tarenaya hassleriana HOM05D004503 ORTHO05D005460 7.8e-168 594.0 369 82.4
vmacro08730 Vaccinium macrocarpon HOM05D004503 ORTHO05D005460 7.8e-168 594.0 442 73.3
EL10Ac1g01630 Beta vulgaris HOM05D004503 ORTHO05D005460 1.3e-167 593.2 362 81.8
Sed0003027 Sechium edule HOM05D004503 ORTHO05D005460 1.7e-167 592.8 369 82.4
AUR62034921 Chenopodium quinoa HOM05D004503 ORTHO05D005460 8.1e-165 583.9 362 81.2
RcHm_v2.0_Chr2g0152001 Rosa chinensis HOM05D004503 ORTHO05D005460 8.1e-165 583.9 378 79.1
Ah.05g168350 Amaranthus hybridus HOM05D004503 ORTHO05D005460 1.1e-164 583.6 362 80.7
ClCG11G016490 Citrullus lanatus HOM05D004503 ORTHO05D005460 1.1e-164 583.6 369 81.8
Nn4g24335 Nelumbo nucifera HOM05D004503 ORTHO05D005460 1.5e-163 579.7 346 84.7
CDE04G0954 Ceratophyllum demersum HOM05D004503 ORTHO05D005460 9.9e-163 577.0 369 79.4
Hund26670 Selenicereus undatus HOM05D004503 ORTHO05D005460 2.2e-162 575.9 397 74.8
TPR.G25270 Trifolium pratense HOM05D004503 ORTHO05D005460 4.9e-162 574.7 339 85.8
FAN05G2445 Fragaria x ananassa HOM05D004503 ORTHO05D005460 3.5e-160 568.5 378 77.2
FvH4_6g38590 Fragaria vesca HOM05D004503 ORTHO05D005460 1.0e-159 567.0 378 77.0
FAN02G3131 Fragaria x ananassa HOM05D004503 ORTHO05D005460 3.0e-159 565.5 378 77.0
FAN14G5858 Fragaria x ananassa HOM05D004503 ORTHO05D005460 3.9e-159 565.1 378 76.7
HPP92_024264 Vanilla planifolia HOM05D004503 ORTHO05D005460 3.9e-159 565.1 366 77.3
Aa31LG5G23690 Aethionema arabicum HOM05D004503 ORTHO05D005460 2.5e-158 562.4 359 78.0
FAN09G1308 Fragaria x ananassa HOM05D004503 ORTHO05D005460 2.1e-157 559.3 378 75.9
ATR0772G123 Amborella trichopoda HOM05D004503 ORTHO05D005460 6.2e-157 557.8 369 75.9
Cfa009838 Carpinus fangiana HOM05D004503 ORTHO05D005460 1.5e-155 553.1 358 81.0
Rhsim12G0009900 Rhododendron simsii HOM05D004503 ORTHO05D005460 2.9e-154 548.9 369 78.3
AL4G35000 Arabidopsis lyrata HOM05D004503 ORTHO05D005460 5.5e-153 544.7 360 77.2
BcaC01g05572 Brassica carinata HOM05D004503 ORTHO05D005460 1.2e-152 543.5 370 76.2
C03p24750 Brassica napus HOM05D004503 ORTHO05D005460 1.2e-152 543.5 370 76.2
BolC3t14864H Brassica oleracea HOM05D004503 ORTHO05D005460 1.2e-152 543.5 370 76.2
AT2G38020 Arabidopsis thaliana HOM05D004503 ORTHO05D005460 2.7e-152 542.3 359 77.2
Thhalv10016232m.g Eutrema salsugineum HOM05D004503 ORTHO05D005460 2.7e-152 542.3 370 76.2
A03p21010 Brassica napus HOM05D004503 ORTHO05D005460 6.0e-152 541.2 370 75.9
BraA03t11340Z Brassica rapa HOM05D004503 ORTHO05D005460 6.0e-152 541.2 370 75.9
CARHR132590 Cardamine hirsuta HOM05D004503 ORTHO05D005460 1.0e-151 540.4 360 76.7
Sp4g20340 Schrenkiella parvula HOM05D004503 ORTHO05D005460 8.7e-151 537.3 370 75.4
Carub.0004s1999 Capsella rubella HOM05D004503 ORTHO05D005460 1.9e-150 536.2 360 76.1
SEGI_01586 Sequoiadendron giganteum HOM05D004503 ORTHO05D005460 1.3e-149 533.5 363 73.0
Os01g0666800 Oryza sativa ssp. japonica HOM05D004503 ORTHO05D005460 6.2e-149 531.2 370 74.1
Haze_23205 Corylus avellana HOM05D004503 ORTHO05D005460 1.1e-148 530.4 628 51.8
HPP92_024256 Vanilla planifolia HOM05D004503 ORTHO05D005460 1.2e-147 526.9 341 77.7
HanXRQChr13g0403751 Helianthus annuus HOM05D004503 ORTHO05D005460 6.0e-144 514.6 312 82.1
BcaB01g03734 Brassica carinata HOM05D004503 ORTHO05D005460 1.3e-143 513.5 375 73.1
BcaNung06337 Brassica carinata HOM05D004503 ORTHO05D005460 3.1e-132 475.7 370 69.7
Pp3c13_19740 Physcomitrium patens HOM05D004503 ORTHO05D005460 4.4e-126 455.3 363 62.8
Mapoly0052s0038 Marchantia polymorpha HOM05D004503 ORTHO05D005460 7.4e-126 454.5 371 60.6
SMO358G0621 Selaginella moellendorffii HOM05D004503 ORTHO05D005460 3.8e-114 415.6 364 58.5
Eucgr.A02017 Eucalyptus grandis HOM05D004503 ORTHO05D005460 1.8e-111 406.8 248 83.9
AL3G43330 Arabidopsis lyrata HOM05D004503 ORTHO05D005460 2.8e-101 372.9 360 59.2
CBR_g46726 Chara braunii HOM05D004503 ORTHO05D005460 1.8e-95 353.6 351 50.1
AagrBONN_evm.TU.Sc2ySwM_368.859 Anthoceros agrestis HOM05D004503 ORTHO05D005460 6.3e-93 345.1 332 53.6
BcaC01g05574 Brassica carinata HOM05D004503 ORTHO05D005460 1.4e-87 327.4 370 53.2
PGR042G2164 Punica granatum HOM05D004503 ORTHO05D005460 1.2e-80 304.3 165 89.7
vmacro23147 Vaccinium macrocarpon HOM05D004503 ORTHO05D005460 5.2e-71 272.3 215 69.3
AagrBONN_evm.TU.Sc2ySwM_117.438 Anthoceros agrestis HOM05D004503 ORTHO05D005460 6.8e-71 271.9 320 48.1
PSO063G7036 Papaver somniferum HOM05D004503 ORTHO05D005460 4.3e-57 226.1 149 79.9
PRCOL_00002554 Prasinoderma coloniale HOM05D004503 ORTHO05D005460 1.9e-49 200.7 364 36.0
Cre03.g199311 Chlamydomonas reinhardtii HOM05D004503 ORTHO05D005460 7.6e-46 188.7 444 31.3
Lsat_1_v5_gn_8_146460 Lactuca sativa HOM05D004503 ORTHO05D005460 1.1e-39 168.3 129 63.6
BcaB02g09224 Brassica carinata HOM05D004503 ORTHO05D005460 1.4e-39 167.9 140 65.7
Cfa025981 Carpinus fangiana HOM05D004503 ORTHO05D005460 2.4e-39 167.2 359 33.7
SHI12362 Sapria himalayana HOM05D004503 ORTHO05D005460 1.5e-38 164.5 125 70.4
TPR.G6024 Trifolium pratense HOM05D004503 ORTHO05D005460 1.4e-28 131.3 67 86.6
Lsat_1_v5_gn_3_97321 Lactuca sativa HOM05D004503 ORTHO05D005460 1.3e-26 124.8 86 73.3
Lsat_1_v5_gn_9_81860 Lactuca sativa HOM05D004503 ORTHO05D005460 2.3e-26 124.0 86 72.1
MBI10_g02227_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 2.3e-26 124.0 114 64.0
MBI10_g05864_MAGBIO Magnolia biondii HOM05D004503 ORTHO05D005460 3.9e-26 123.2 128 56.2
Lsat_1_v5_gn_1_120320 Lactuca sativa HOM05D004503 ORTHO05D005460 1.9e-25 120.9 86 68.6
Lsat_1_v5_gn_9_102961 Lactuca sativa HOM05D004503 ORTHO05D005460 3.3e-25 120.2 86 68.6
Lsat_1_v5_gn_4_100901 Lactuca sativa HOM05D004503 ORTHO05D005460 1.5e-22 111.3 68 77.9
Lsat_1_v5_gn_5_109060 Lactuca sativa HOM05D004503 ORTHO05D005460 6.5e-21 105.9 101 59.4
Lsat_1_v5_gn_2_36800 Lactuca sativa HOM05D004503 ORTHO05D005460 1.9e-20 104.4 61 78.7
Lsat_1_v5_gn_0_13460 Lactuca sativa HOM05D003536 ORTHO05D004233 1.8e-18 97.8 102 55.9
Lsat_1_v5_gn_6_107780 Lactuca sativa HOM05D004503 ORTHO05D003526 5.1e-18 96.3 96 58.3
Lsat_1_v5_gn_2_120 Lactuca sativa HOM05D003203 ORTHO05D003526 1.1e-17 95.1 113 50.4
Lsat_1_v5_gn_1_93381 Lactuca sativa HOM05D003203 ORTHO05D003526 4.8e-16 89.7 103 53.4
Lsat_1_v5_gn_8_75300 Lactuca sativa HOM05D004503 ORTHO05D005460 9.1e-15 85.5 104 49.0
TPR.G24652 Trifolium pratense HOM05D004503 ORTHO05D005460 2.0e-14 84.3 54 81.5
Lsat_1_v5_gn_8_98160 Lactuca sativa HOM05D004503 ORTHO05D005460 1.0e-13 82.0 96 51.0
SalBow8G3309 Salvia bowleyana HOM05D004503 ORTHO05D005460 2.9e-13 80.5 49 81.6
Lsat_1_v5_gn_8_13240 Lactuca sativa HOM05D004503 ORTHO05D005460 3.3e-09 67.0 84 50.0
Rhsim08G0005700 Rhododendron simsii HOM05D004503 ORTHO05D037450 9.7e-09 65.5 70 57.1


User provided reference genes

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