Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 0.0e+00 1859.3 956 100.0
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 0.0e+00 1690.6 956 91.9
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 0.0e+00 1512.3 969 82.2
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 0.0e+00 1505.0 969 81.9
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 0.0e+00 1505.0 969 81.9
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 0.0e+00 1082.0 855 70.1
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 1.2e-308 1063.1 674 82.8
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 2.7e-292 1008.8 966 58.2
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 6.7e-291 1004.2 896 60.8
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 1.3e-289 1000.0 995 57.1
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 2.5e-285 985.7 967 56.9
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 4.4e-282 974.9 991 56.0
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 2.8e-281 972.2 846 61.7
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 4.1e-280 968.4 988 56.5
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 2.2e-278 962.6 1002 54.6
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 6.5e-278 961.1 993 56.1
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 2.7e-276 955.7 993 55.7
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 4.7e-276 954.9 997 55.7
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 6.1e-276 954.5 982 55.8
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 2.8e-273 945.7 972 55.1
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 7.0e-272 941.0 973 54.2
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 4.5e-271 938.3 977 55.9
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 1.0e-270 937.2 1057 51.8
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.6e-268 929.9 968 54.3
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 3.0e-267 925.6 996 55.2
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 3.0e-267 925.6 996 53.8
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 8.8e-267 924.1 995 54.3
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 3.4e-266 922.2 996 54.8
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 9.1e-264 914.1 956 54.9
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 1.3e-262 910.2 980 53.4
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 2.3e-262 909.4 947 54.9
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 1.5e-258 896.7 1001 51.6
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 1.4e-256 890.2 979 53.4
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 1.6e-255 886.7 992 52.5
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 4.5e-255 885.2 949 55.1
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 5.9e-255 884.8 874 57.3
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.0e-254 884.0 995 51.0
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 3.3e-253 879.0 869 56.8
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 3.0e-251 872.5 931 53.5
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 4.0e-251 872.1 954 52.7
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 6.8e-251 871.3 923 54.1
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 9.8e-250 867.5 851 56.6
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 4.9e-249 865.1 965 52.8
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 3.2e-248 862.4 848 55.3
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 4.1e-248 862.1 998 50.2
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 9.2e-248 860.9 848 55.0
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 1.7e-246 856.7 961 52.2
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 8.6e-246 854.4 945 52.7
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 1.5e-245 853.6 988 51.5
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 9.5e-245 850.9 969 51.9
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 2.8e-244 849.4 962 51.9
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 4.0e-243 845.5 948 52.2
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 5.2e-243 845.1 942 51.7
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 6.8e-243 844.7 1000 50.4
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 8.9e-243 844.3 966 52.1
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 4.9e-241 838.6 859 54.6
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 2.4e-240 836.3 960 51.5
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 3.2e-240 835.9 882 53.3
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 3.2e-240 835.9 992 49.4
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 7.8e-239 831.2 886 53.5
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 2.8e-236 822.8 744 60.1
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 6.2e-236 821.6 948 50.1
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 1.8e-235 820.1 915 51.0
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 4.9e-233 812.0 947 50.6
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 4.9e-233 812.0 880 53.0
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 8.3e-233 811.2 953 50.6
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 1.2e-231 807.4 872 54.4
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 2.7e-231 806.2 947 49.2
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 3.0e-230 802.7 996 48.8
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 5.1e-230 802.0 956 49.1
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 8.6e-230 801.2 989 49.6
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 4.3e-229 798.9 958 49.9
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 8.1e-228 794.7 850 53.8
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 1.8e-227 793.5 713 61.3
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.2e-226 790.8 981 48.9
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 4.4e-226 788.9 883 52.2
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 5.8e-226 788.5 973 48.5
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 5.4e-224 781.9 989 48.2
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 4.3e-221 772.3 935 49.0
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 9.6e-221 771.2 831 52.1
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 1.2e-220 770.8 944 49.2
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 8.1e-220 768.1 948 48.8
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 1.7e-217 760.4 871 50.1
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 3.8e-217 759.2 949 49.3
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 4.6e-215 752.3 948 47.9
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 3.0e-214 749.6 927 47.6
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 3.3e-213 746.1 929 48.0
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 3.6e-212 742.7 934 46.9
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 1.1e-211 741.1 929 47.8
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 1.0e-206 724.5 974 48.4
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 1.8e-206 723.8 966 46.6
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 2.3e-206 723.4 856 49.3
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 2.6e-202 709.9 998 46.2
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 3.8e-201 706.1 865 48.9
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 6.9e-195 685.3 850 49.6
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 1.4e-184 651.0 711 52.7
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 1.2e-183 647.9 959 42.3
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 2.0e-181 640.6 710 53.5
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 1.3e-180 637.9 623 56.2
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 1.4e-179 634.4 647 54.4
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 3.3e-165 586.6 695 51.2
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 1.8e-155 554.3 1065 37.4
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.7e-153 547.7 937 39.0
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 3.4e-149 533.5 947 38.0
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 2.8e-140 503.8 1149 35.6
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 2.3e-137 494.2 808 40.0
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 4.1e-123 446.8 285 83.2
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 3.5e-114 417.2 479 49.3
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 1.2e-109 402.1 1155 30.3
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 8.4e-92 342.8 391 49.4
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 6.9e-78 296.6 209 78.9
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 5.1e-65 253.8 917 27.6
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 4.7e-50 204.1 856 23.8
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 1.9e-43 182.2 396 31.8
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 5.2e-41 174.1 396 31.1
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.8e-30 139.0 135 54.1
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 2.8e-26 125.2 311 30.2
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 4.7e-26 124.4 325 29.5
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 2.1e-18 99.0 435 24.4
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.6e-16 92.0 188 38.3
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 4.4e-16 91.3 87 55.2
COL.COLO4_05996 Corchorus olitorius HOM05D006375 ORTHO05D000012 1.7e-12 79.3 109 44.0


User provided reference genes

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