Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.8e-89 332.8 194 100.0
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 6.5e-68 261.2 143 95.1
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 1.5e-64 250.0 145 88.3
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 3.4e-64 248.8 146 92.5
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 4.4e-64 248.4 146 92.5
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 4.4e-64 248.4 146 92.5
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 7.2e-59 231.1 169 82.8
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 2.1e-58 229.6 176 80.7
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 2.7e-58 229.2 143 90.9
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 1.4e-57 226.9 177 79.7
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 1.4e-57 226.9 160 76.9
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 4.0e-57 225.3 167 84.4
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 6.8e-57 224.6 172 81.4
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 6.8e-57 224.6 139 85.6
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 2.0e-56 223.0 144 84.7
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 7.5e-56 221.1 147 85.0
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 9.8e-56 220.7 164 85.4
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 4.9e-55 218.4 168 76.2
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 8.3e-55 217.6 142 86.6
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 1.8e-54 216.5 170 83.5
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 2.4e-54 216.1 159 78.6
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 2.4e-54 216.1 172 82.6
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 2.4e-54 216.1 177 79.7
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 5.4e-54 214.9 174 82.2
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 5.4e-54 214.9 168 80.4
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 1.2e-53 213.8 148 83.8
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 1.2e-53 213.8 171 80.1
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 2.0e-53 213.0 175 80.0
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 2.0e-53 213.0 152 80.9
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 3.5e-53 212.2 181 74.0
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 3.5e-53 212.2 172 82.6
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 4.5e-53 211.8 169 76.9
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 4.5e-53 211.8 152 82.9
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 5.9e-53 211.5 156 80.8
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 5.9e-53 211.5 171 82.5
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 7.7e-53 211.1 152 81.6
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 7.7e-53 211.1 179 76.5
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 7.7e-53 211.1 150 78.7
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.0e-52 210.7 148 83.1
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.0e-52 210.7 148 83.1
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 1.7e-52 209.9 169 75.7
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.7e-52 209.9 153 79.1
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 1.7e-52 209.9 146 83.6
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 2.9e-52 209.1 149 77.9
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.9e-52 209.1 174 80.5
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 2.9e-52 209.1 174 80.5
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.9e-52 209.1 144 84.0
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 2.9e-52 209.1 152 80.3
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 3.8e-52 208.8 149 79.9
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 3.8e-52 208.8 181 79.6
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 5.0e-52 208.4 148 82.4
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 5.0e-52 208.4 141 84.4
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 5.0e-52 208.4 153 80.4
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 6.6e-52 208.0 145 83.4
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 6.6e-52 208.0 145 83.4
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 6.6e-52 208.0 145 83.4
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 6.6e-52 208.0 146 80.1
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 8.6e-52 207.6 173 81.5
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 8.6e-52 207.6 174 75.9
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 8.6e-52 207.6 172 80.2
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 1.1e-51 207.2 150 79.3
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 1.1e-51 207.2 150 79.3
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 1.5e-51 206.8 172 79.1
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 1.5e-51 206.8 174 80.5
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 1.5e-51 206.8 144 79.9
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 1.9e-51 206.5 177 76.3
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 1.9e-51 206.5 148 79.1
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 2.5e-51 206.1 169 75.1
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 2.5e-51 206.1 176 81.2
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 5.6e-51 204.9 146 75.3
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 5.6e-51 204.9 153 78.4
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 7.3e-51 204.5 145 81.4
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 7.3e-51 204.5 154 76.6
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 7.3e-51 204.5 151 78.8
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 9.5e-51 204.1 172 81.4
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 1.2e-50 203.8 155 74.8
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 1.6e-50 203.4 178 78.7
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 1.6e-50 203.4 153 79.7
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 2.1e-50 203.0 186 72.6
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 2.1e-50 203.0 186 74.2
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 4.7e-50 201.8 139 82.7
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 4.7e-50 201.8 146 74.7
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 4.7e-50 201.8 163 71.8
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 4.7e-50 201.8 145 78.6
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 6.1e-50 201.4 174 77.0
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 6.1e-50 201.4 183 68.9
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 8.0e-50 201.1 145 79.3
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 8.0e-50 201.1 145 79.3
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 8.0e-50 201.1 153 77.1
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 8.0e-50 201.1 153 74.5
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 8.0e-50 201.1 132 85.6
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 8.0e-50 201.1 155 72.3
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 1.0e-49 200.7 153 75.8
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 1.0e-49 200.7 150 78.7
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 1.0e-49 200.7 179 74.3
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 1.8e-49 199.9 150 74.0
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 3.0e-49 199.1 144 79.9
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 3.0e-49 199.1 136 81.6
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 3.0e-49 199.1 158 74.7
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 4.0e-49 198.7 148 77.0
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 4.0e-49 198.7 148 77.0
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 6.8e-49 198.0 158 74.1
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 6.8e-49 198.0 151 76.2
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 8.9e-49 197.6 178 74.2
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 1.2e-48 197.2 168 67.9
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 2.0e-48 196.4 148 77.0
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 2.0e-48 196.4 144 75.7
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 3.4e-48 195.7 143 81.1
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 3.4e-48 195.7 210 57.6
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 3.4e-48 195.7 205 66.3
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 4.4e-48 195.3 150 77.3
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 4.4e-48 195.3 150 77.3
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 4.4e-48 195.3 150 77.3
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 4.4e-48 195.3 99 90.9
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 4.4e-48 195.3 144 79.9
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 4.4e-48 195.3 152 75.7
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 5.7e-48 194.9 147 77.6
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 7.5e-48 194.5 157 68.2
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 7.5e-48 194.5 148 75.7
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 9.8e-48 194.1 180 73.9
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 1.3e-47 193.7 149 77.2
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 2.2e-47 193.0 155 74.2
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 2.9e-47 192.6 145 77.9
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 4.9e-47 191.8 94 97.9
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 6.4e-47 191.4 143 77.6
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 6.4e-47 191.4 154 67.5
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 2.4e-46 189.5 148 69.6
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 2.4e-46 189.5 141 79.4
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 2.4e-46 189.5 141 79.4
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 4.1e-46 188.7 151 68.2
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 5.4e-46 188.3 154 66.9
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 5.4e-46 188.3 154 66.9
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 5.4e-46 188.3 154 66.9
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 2.7e-45 186.0 156 74.4
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 3.5e-45 185.7 91 95.6
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 4.6e-45 185.3 145 73.1
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 1.0e-44 184.1 149 72.5
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 1.0e-44 184.1 127 79.5
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 1.3e-44 183.7 149 72.5
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 2.3e-44 183.0 152 68.4
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 3.0e-44 182.6 100 83.0
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 3.0e-44 182.6 148 73.0
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 9.5e-43 177.6 99 81.8
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 9.5e-43 177.6 89 94.4
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.6e-42 176.8 150 70.7
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 2.8e-42 176.0 115 90.4
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 6.2e-42 174.9 122 72.1
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 2.6e-40 169.5 155 65.8
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 1.2e-37 160.6 80 93.8
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 2.1e-34 149.8 125 65.6
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 3.4e-32 142.5 173 61.8
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 4.4e-32 142.1 126 61.1
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 2.4e-30 136.3 80 73.8
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 2.3e-28 129.8 86 76.7
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 5.1e-28 128.6 99 68.7
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 1.2e-26 124.0 76 68.4
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 3.4e-24 115.9 57 96.5
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 2.9e-23 112.8 162 55.6
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 3.2e-22 109.4 92 60.9
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 3.2e-22 109.4 97 62.9
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 1.0e-20 104.4 94 50.0
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 1.3e-20 104.0 97 59.8
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 1.6e-18 97.1 49 83.7
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 1.5e-11 73.9 45 77.8
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 2.8e-10 69.7 74 55.4
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 2.8e-10 69.7 74 55.4
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 2.8e-10 69.7 74 55.4
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 1.4e-09 67.4 39 76.9
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 2.4e-09 66.6 74 54.1
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 2.4e-09 66.6 74 54.1
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 2.4e-09 66.6 74 54.1
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 1.7e-07 60.5 35 77.1


User provided reference genes

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