Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0007366g0060 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.2e-120 436.4 207 100.0
CAN.G824.3 Capsicum annuum HOM05D005363 ORTHO05D006607 2.2e-106 389.0 198 93.9
Dinv08347 Davidia involucrata HOM05D005363 ORTHO05D006607 7.1e-105 384.0 219 84.9
Sopen09g004090 Solanum pennellii HOM05D005363 ORTHO05D006607 7.1e-105 384.0 214 87.4
Sc03g0009580 Simmondsia chinensis HOM05D005363 ORTHO05D006607 2.7e-104 382.1 214 86.0
Lsat_1_v5_gn_9_95600 Lactuca sativa HOM05D005363 ORTHO05D006607 1.3e-103 379.8 214 85.5
Lj8C160T16 Lonicera japonica HOM05D005363 ORTHO05D006607 2.3e-103 379.0 214 86.0
TAR629G3355 Trochodendron aralioides HOM05D005363 ORTHO05D006607 3.0e-103 378.6 214 86.0
Cc06_g05460 Coffea canephora HOM05D005363 ORTHO05D006607 3.9e-103 378.3 214 85.5
Cpa.g.sc12.44 Carica papaya HOM05D005363 ORTHO05D006607 5.1e-103 377.9 214 85.5
RhsimUnG0258300 Rhododendron simsii HOM05D005363 ORTHO05D006607 5.1e-103 377.9 214 85.5
CSS0003917 Camellia sinensis var. sinensis HOM05D005363 ORTHO05D006607 6.7e-103 377.5 214 85.0
vmacro09564 Vaccinium macrocarpon HOM05D005363 ORTHO05D006607 1.5e-102 376.3 215 85.6
HanXRQChr03g0077211 Helianthus annuus HOM05D005363 ORTHO05D006607 1.9e-102 375.9 214 84.1
Actinidia35283 Actinidia chinensis HOM05D005363 ORTHO05D006607 2.5e-102 375.6 214 85.0
ECA240G2604 Erigeron canadensis HOM05D005363 ORTHO05D006607 2.5e-102 375.6 214 84.1
Thecc.07G070700 Theobroma cacao HOM05D005363 ORTHO05D006607 2.5e-102 375.6 219 84.5
Aqoxy1G03881 Aquilegia oxysepala HOM05D005363 ORTHO05D006607 3.3e-102 375.2 214 85.5
AUR62029306 Chenopodium quinoa HOM05D005363 ORTHO05D006607 3.3e-102 375.2 214 83.6
Ciclev10007579m.g Citrus clementina HOM05D005363 ORTHO05D006607 3.3e-102 375.2 214 84.6
GSVIVG01014441001 Vitis vinifera HOM05D005363 ORTHO05D006607 5.6e-102 374.4 214 85.5
CiPaw.11G177000 Carya illinoinensis HOM05D005363 ORTHO05D006607 7.4e-102 374.0 214 83.6
EL10Ac4g08052 Beta vulgaris HOM05D005363 ORTHO05D006607 9.6e-102 373.6 214 82.2
Gohir.D05G362100 Gossypium hirsutum HOM05D005363 ORTHO05D006607 9.6e-102 373.6 214 84.6
Gorai.009G430700 Gossypium raimondii HOM05D005363 ORTHO05D006607 9.6e-102 373.6 214 84.6
QL08p017669 Quercus lobata HOM05D005363 ORTHO05D006607 9.6e-102 373.6 214 84.6
SGA_v2.0_scaffold13G06767 Striga asiatica HOM05D005363 ORTHO05D006607 9.6e-102 373.6 214 84.6
Peaxi162Scf00290g00111 Petunia axillaris HOM05D005363 ORTHO05D006607 1.3e-101 373.2 183 95.6
BcaB08g35781 Brassica carinata HOM05D005363 ORTHO05D006607 1.6e-101 372.9 214 83.2
BcaC04g20356 Brassica carinata HOM05D005363 ORTHO05D006607 1.6e-101 372.9 214 83.2
BolC9t57330H Brassica oleracea HOM05D005363 ORTHO05D006607 1.6e-101 372.9 214 83.2
CsaV3_3G044350 Cucumis sativus L. HOM05D005363 ORTHO05D006607 2.1e-101 372.5 214 84.1
Migut.J00972 Erythranthe guttata HOM05D005363 ORTHO05D006607 2.1e-101 372.5 214 85.0
Nn1g03887 Nelumbo nucifera HOM05D005363 ORTHO05D006607 2.1e-101 372.5 214 83.6
Sabra16G0268700 Salix brachista HOM05D005363 ORTHO05D006607 2.1e-101 372.5 214 84.1
THA.LOC104813315 Tarenaya hassleriana HOM05D005363 ORTHO05D006607 2.1e-101 372.5 214 83.6
HPP92_026561 Vanilla planifolia HOM05D005363 ORTHO05D006607 2.1e-101 372.5 214 82.7
MSTRG.5819 Avicennia marina HOM05D005363 ORTHO05D006607 2.8e-101 372.1 214 84.6
COL.COLO4_09485 Corchorus olitorius HOM05D005363 ORTHO05D006607 2.8e-101 372.1 214 84.1
PSO832G2870 Papaver somniferum HOM05D005363 ORTHO05D006607 3.7e-101 371.7 214 83.2
Potri.001G407300 Populus trichocarpa HOM05D005363 ORTHO05D006607 3.7e-101 371.7 214 84.1
Carub.0008s1460 Capsella rubella HOM05D005363 ORTHO05D006607 4.8e-101 371.3 214 83.2
CARHR267540 Cardamine hirsuta HOM05D005363 ORTHO05D006607 4.8e-101 371.3 214 83.2
Haze_09533 Corylus avellana HOM05D005363 ORTHO05D006607 4.8e-101 371.3 214 84.6
Sabra16G0270900 Salix brachista HOM05D005363 ORTHO05D006607 4.8e-101 371.3 214 83.6
Sp6g16300 Schrenkiella parvula HOM05D005363 ORTHO05D006607 4.8e-101 371.3 214 83.2
BraA10t43250Z Brassica rapa HOM05D005363 ORTHO05D006607 6.2e-101 370.9 214 82.7
SalBow3G2312 Salvia bowleyana HOM05D005363 ORTHO05D006607 6.2e-101 370.9 214 83.6
Aa31LG3G10220 Aethionema arabicum HOM05D005363 ORTHO05D006607 1.1e-100 370.2 214 82.7
CDE12G0672 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 1.1e-100 370.2 214 82.7
Atru.chr2.2913 Acer truncatum HOM05D005363 ORTHO05D006607 1.4e-100 369.8 214 83.2
ClCG11G018480 Citrullus lanatus HOM05D005363 ORTHO05D006607 1.4e-100 369.8 214 83.6
Manes.15G082900 Manihot esculenta HOM05D005363 ORTHO05D006607 1.4e-100 369.8 214 84.1
Oeu009902.1 Olea europaea HOM05D005363 ORTHO05D006607 1.4e-100 369.8 219 83.6
PSO210G7030 Papaver somniferum HOM05D005363 ORTHO05D006607 1.4e-100 369.8 214 82.2
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 1.8e-100 369.4 214 84.1
PGR083G1158 Punica granatum HOM05D005363 ORTHO05D006607 2.4e-100 369.0 214 84.1
Duzib170G0704 Durio zibethinus HOM05D005363 ORTHO05D006607 3.1e-100 368.6 219 83.1
Thhalv10012804m.g Eutrema salsugineum HOM05D005363 ORTHO05D006607 3.1e-100 368.6 214 82.2
Phvul.005G085700 Phaseolus vulgaris HOM05D005363 ORTHO05D006607 3.1e-100 368.6 214 83.6
Sed0012869 Sechium edule HOM05D005363 ORTHO05D006607 3.1e-100 368.6 214 83.2
CANSAT11G0579 Cannabis sativa HOM05D005363 ORTHO05D006607 5.3e-100 367.9 214 83.2
MD11G1235900 Malus domestica HOM05D005363 ORTHO05D006607 5.3e-100 367.9 214 83.2
Glyma.12G219100 Glycine max HOM05D005363 ORTHO05D006607 6.9e-100 367.5 214 83.2
Lj3g0015043 Lotus japonicus HOM05D005363 ORTHO05D006607 6.9e-100 367.5 219 82.2
FAN21G3123 Fragaria x ananassa HOM05D005363 ORTHO05D006607 9.0e-100 367.1 214 83.6
FAN25G3415 Fragaria x ananassa HOM05D005363 ORTHO05D006607 9.0e-100 367.1 214 83.6
Prupe.4G191100 Prunus persica HOM05D005363 ORTHO05D006607 9.0e-100 367.1 214 82.7
AT5G54260 Arabidopsis thaliana HOM05D005363 ORTHO05D006607 1.2e-99 366.7 214 82.2
FvH4_3g21040 Fragaria vesca HOM05D005363 ORTHO05D006607 2.6e-99 365.5 214 83.2
FAN11G3021 Fragaria x ananassa HOM05D005363 ORTHO05D006607 2.6e-99 365.5 214 83.2
MD03G1218100 Malus domestica HOM05D005363 ORTHO05D006607 5.8e-99 364.4 214 81.8
RcHm_v2.0_Chr5g0036071 Rosa chinensis HOM05D005363 ORTHO05D006607 5.8e-99 364.4 214 83.2
A10p11550 Brassica napus HOM05D005363 ORTHO05D006607 7.6e-99 364.0 240 73.8
C09p44570 Brassica napus HOM05D005363 ORTHO05D006607 1.0e-98 363.6 238 74.4
Lalb_Chr25g0286791 Lupinus albus HOM05D005363 ORTHO05D006607 1.7e-98 362.8 214 81.8
Medtr2g081100 Medicago truncatula HOM05D005363 ORTHO05D006607 2.9e-98 362.1 214 81.3
Hma1.2p1_1176F.1_g264200 Hydrangea macrophylla HOM05D005363 ORTHO05D006607 3.8e-98 361.7 241 75.5
ATR0693G020 Amborella trichopoda HOM05D005363 ORTHO05D006607 4.9e-98 361.3 210 81.9
TPR.G32857 Trifolium pratense HOM05D005363 ORTHO05D006607 6.5e-98 360.9 214 80.8
Psat2g184560 Pisum sativum HOM05D005363 ORTHO05D006607 8.4e-98 360.5 214 80.8
arahy.Tifrunner.gnm1.ann1.3P80NP Arachis hypogaea HOM05D005363 ORTHO05D006607 1.1e-97 360.1 214 80.8
arahy.Tifrunner.gnm1.ann1.42XSYF Arachis hypogaea HOM05D005363 ORTHO05D006607 1.1e-97 360.1 214 80.8
MELO3C018187.2 Cucumis melo HOM05D005363 ORTHO05D006607 1.4e-97 359.8 207 84.1
Os04g0635900 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 3.2e-97 358.6 214 79.0
DCAR_018424 Daucus carota HOM05D005363 ORTHO05D006607 4.2e-97 358.2 178 94.9
FAN16G0276 Fragaria x ananassa HOM05D005363 ORTHO05D006607 5.5e-97 357.8 226 78.8
Hund02186 Selenicereus undatus HOM05D005363 ORTHO05D006607 7.1e-97 357.5 244 72.1
SHI33827 Sapria himalayana HOM05D005363 ORTHO05D006607 9.3e-97 357.1 219 78.1
MBI15_g19746_MAGBIO Magnolia biondii HOM05D005363 ORTHO05D006607 4.6e-96 354.8 179 92.7
Zm00001eb069270 Zea mays HOM05D005363 ORTHO05D006607 6.0e-96 354.4 214 78.5
AUR62015595 Chenopodium quinoa HOM05D005363 ORTHO05D006607 7.9e-96 354.0 240 73.3
unitig_8.g4146 Utricularia gibba HOM05D005363 ORTHO05D006607 1.0e-95 353.6 214 78.5
PGSC0003DMG400002669 Solanum tuberosum HOM05D005363 ORTHO05D006607 1.3e-95 353.2 176 94.9
AL8G29590 Arabidopsis lyrata HOM05D005363 ORTHO05D006607 1.5e-94 349.7 179 91.1
Pp3c24_2350 Physcomitrium patens HOM05D005363 ORTHO05D006607 6.3e-93 344.4 214 74.8
Mapoly0023s0117 Marchantia polymorpha HOM05D005363 ORTHO05D006607 2.4e-92 342.4 214 76.6
HPP92_026534 Vanilla planifolia HOM05D005363 ORTHO05D006607 6.9e-92 340.9 214 77.6
Gohir.D01G056400 Gossypium hirsutum HOM05D005363 ORTHO05D006607 8.5e-90 334.0 179 87.7
Nitab4.5_0001969g0080 Nicotiana tabacum HOM05D005363 ORTHO05D006607 1.2e-88 330.1 178 91.0
SMO347G0170 Selaginella moellendorffii HOM05D005363 ORTHO05D006607 1.8e-87 326.2 214 70.6
AagrBONN_evm.TU.Sc2ySwM_117.2240 Anthoceros agrestis HOM05D005363 ORTHO05D006607 3.0e-87 325.5 214 73.4
Gohir.A04G025700 Gossypium hirsutum HOM05D005363 ORTHO05D006607 3.3e-86 322.0 226 73.0
CBR_g48040 Chara braunii HOM05D005363 ORTHO05D006607 1.7e-85 319.7 213 71.4
Gorai.002G076500 Gossypium raimondii HOM05D005363 ORTHO05D006607 1.1e-81 307.0 214 72.4
Ca_01813_v3 Cicer arietinum L. HOM05D005363 ORTHO05D006607 2.1e-72 276.2 214 66.8
Os08g0177600 Oryza sativa ssp. japonica HOM05D005363 ORTHO05D006607 2.1e-72 276.2 213 61.0
Zm00001eb171920 Zea mays HOM05D005363 ORTHO05D006607 3.6e-72 275.4 213 61.5
Cre12.g556911 Chlamydomonas reinhardtii HOM05D005363 ORTHO05D006607 1.1e-65 253.8 214 59.3
Gohir.A04G026000 Gossypium hirsutum HOM05D005363 ORTHO05D006607 5.5e-65 251.5 125 93.6
MCO13G379 Micromonas commoda HOM05D005363 ORTHO05D006607 8.0e-64 247.7 214 56.5
CDE12G0057 Ceratophyllum demersum HOM05D005363 ORTHO05D006607 6.1e-56 221.5 167 67.1
unitig_13.g31430 Utricularia gibba HOM05D005363 ORTHO05D006607 1.4e-55 220.3 159 69.8
PRCOL_00003292 Prasinoderma coloniale HOM05D005363 ORTHO05D006607 4.8e-53 211.8 220 49.5
Cfa025591 Carpinus fangiana HOM05D005363 ORTHO05D006607 5.4e-44 181.8 212 43.4
CAN.G397.4 Capsicum annuum HOM05D005363 ORTHO05D006607 1.7e-42 176.8 88 95.5
SEGI_22122 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 3.1e-31 139.4 75 88.0
SEGI_32923 Sequoiadendron giganteum HOM05D005363 ORTHO05D006607 1.9e-28 130.2 89 71.9


User provided reference genes

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