Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.6e-241 837.8 409 100.0
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 7.7e-236 820.1 413 97.8
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 3.1e-229 798.1 414 94.7
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 3.0e-224 781.6 414 93.0
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 5.2e-224 780.8 414 92.8
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 1.2e-223 779.6 414 92.8
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.0e-200 703.4 418 83.0
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 6.4e-198 694.1 413 82.1
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 6.6e-195 684.1 410 82.4
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.9e-194 682.6 421 80.8
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 8.9e-192 673.7 419 80.4
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 2.0e-191 672.5 416 80.0
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 4.4e-191 671.4 422 79.6
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 6.4e-190 667.5 415 79.3
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 5.4e-189 664.5 411 79.6
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.6e-188 662.9 416 78.1
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 4.6e-188 661.4 419 78.8
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 6.0e-188 661.0 396 80.3
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 1.0e-187 660.2 416 77.6
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 3.0e-187 658.7 411 78.1
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 3.9e-187 658.3 411 78.6
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 5.1e-187 657.9 436 75.5
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 6.6e-187 657.5 412 77.7
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 6.6e-187 657.5 411 77.9
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 6.6e-187 657.5 399 80.2
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.5e-186 656.4 411 78.1
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 1.9e-186 656.0 421 78.1
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 1.9e-186 656.0 411 77.6
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 1.9e-186 656.0 395 80.0
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 4.3e-186 654.8 411 77.4
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 2.1e-185 652.5 385 81.6
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 2.8e-185 652.1 415 76.6
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 3.6e-185 651.7 417 77.7
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 3.6e-185 651.7 389 80.2
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 1.8e-184 649.4 393 79.1
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 2.3e-184 649.0 417 75.3
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 5.2e-184 647.9 418 77.3
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 6.8e-184 647.5 423 77.1
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 6.8e-184 647.5 412 77.2
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 4.4e-183 644.8 420 75.0
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 7.5e-183 644.0 417 76.3
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 1.7e-182 642.9 399 77.7
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 4.9e-182 641.3 410 76.3
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 6.4e-182 641.0 388 79.6
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 3.2e-181 638.6 412 76.5
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 3.2e-181 638.6 411 76.9
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 3.2e-181 638.6 412 77.2
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 3.2e-181 638.6 403 76.9
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 9.2e-181 637.1 322 94.4
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.2e-180 636.7 384 78.6
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.2e-180 636.7 384 78.6
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 1.2e-180 636.7 419 75.7
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.1e-180 636.0 403 74.7
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 4.6e-180 634.8 419 75.4
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 6.0e-180 634.4 406 75.4
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 6.0e-180 634.4 364 86.3
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 7.8e-180 634.0 408 76.0
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 7.8e-180 634.0 412 73.8
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.0e-179 633.6 417 72.9
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 1.3e-179 633.3 416 72.4
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 3.9e-179 631.7 419 75.2
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 6.6e-179 630.9 423 74.2
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 1.1e-178 630.2 411 75.4
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 5.6e-178 627.9 410 73.9
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 1.2e-177 626.7 420 73.8
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.1e-176 623.6 411 74.7
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.1e-176 623.6 417 72.9
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 1.1e-176 623.6 416 71.4
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 2.4e-176 622.5 414 75.1
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 3.1e-176 622.1 418 74.4
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 3.1e-176 622.1 411 74.7
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 5.2e-176 621.3 367 84.7
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.2e-175 620.2 421 73.4
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 2.0e-175 619.4 420 72.9
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 2.0e-175 619.4 389 76.3
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 3.4e-175 618.6 420 72.9
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 5.8e-175 617.8 412 74.3
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 5.8e-175 617.8 410 72.9
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 7.6e-175 617.5 389 76.1
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.3e-174 616.7 422 72.7
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.3e-174 616.7 422 72.7
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 3.8e-174 615.1 420 72.4
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 4.9e-174 614.8 422 72.5
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 4.9e-174 614.8 422 72.5
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 4.9e-174 614.8 422 72.5
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.9e-173 612.8 408 74.3
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 7.1e-173 610.9 404 78.7
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 3.6e-169 598.6 347 83.0
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 5.4e-165 584.7 396 73.0
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 1.0e-163 580.5 414 68.4
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 8.7e-163 577.4 400 70.5
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 5.6e-162 574.7 370 78.6
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.3e-161 573.5 373 76.1
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.9e-157 559.7 348 79.0
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.2e-156 557.0 347 78.7
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 2.9e-150 535.8 329 78.7
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 2.5e-149 532.7 413 63.4
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 4.6e-148 528.5 293 88.1
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 8.7e-147 524.2 333 76.6
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 1.6e-145 520.0 417 60.7
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 1.4e-144 516.9 320 77.5
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 4.0e-144 515.4 320 76.2
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.5e-143 513.5 317 77.3
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 7.1e-141 504.6 397 59.2
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 7.9e-140 501.1 313 74.4
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 5.1e-139 498.4 276 87.3
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 8.7e-139 497.7 403 59.8
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 3.7e-137 492.3 313 72.8
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 3.7e-121 439.1 243 93.0
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 1.5e-117 427.2 267 76.0
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 2.1e-116 423.3 230 88.7
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 2.8e-105 386.3 417 47.0
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.7e-97 360.5 274 60.2
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 2.9e-94 349.7 182 94.5
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 3.3e-93 346.3 277 65.0
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 3.4e-90 336.3 420 42.6
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.5e-77 294.3 389 42.2
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 1.2e-63 248.1 453 34.0
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 1.6e-63 247.7 360 39.2
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 1.7e-57 227.6 306 43.5
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 5.8e-34 149.4 88 90.9
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 6.0e-31 139.4 81 77.8
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 3.7e-20 103.6 93 63.4
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 4.5e-18 96.7 74 62.2
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 2.1e-15 87.8 123 41.5
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 3.6e-15 87.0 88 53.4
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 2.3e-14 84.3 41 82.9
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 6.3e-12 76.3 59 69.5
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 5.0e-09 66.6 61 50.8
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 9.4e-08 62.4 88 43.2


User provided reference genes

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