Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003582g0070 Nicotiana tabacum HOM05D000924 ORTHO05D001209 8.7e-41 170.2 111 100.0
Nitab4.5_0026257g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 4.9e-28 127.9 137 69.3
Nitab4.5_0002503g0090 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.1e-22 110.2 136 66.9
Nitab4.5_0004801g0020 Nicotiana tabacum HOM05D000924 ORTHO05D001209 3.1e-22 108.6 136 58.1
Nitab4.5_0008569g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 5.8e-21 104.4 146 57.5
Nitab4.5_0005694g0030 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.1e-19 100.1 146 56.8
Nitab4.5_0003811g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.9e-19 99.4 94 60.6
Solyc06g082100.4 Solanum lycopersicum HOM05D000924 ORTHO05D001209 5.5e-19 97.8 145 59.3
Sed0004818 Sechium edule HOM05D000924 ORTHO05D001209 2.1e-18 95.9 145 59.3
Manes.18G005100 Manihot esculenta HOM05D000924 ORTHO05D001209 6.0e-18 94.4 146 53.4
Hma1.2p1_0914F.1_g236150 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 7.9e-18 94.0 145 57.9
CAN.G1095.6 Capsicum annuum HOM05D000924 ORTHO05D001209 1.0e-17 93.6 145 55.9
CiPaw.07G131100 Carya illinoinensis HOM05D000924 ORTHO05D001209 1.0e-17 93.6 144 59.0
DCAR_003081 Daucus carota HOM05D000924 ORTHO05D001209 1.0e-17 93.6 146 56.8
Dinv32321 Davidia involucrata HOM05D000924 ORTHO05D001209 1.3e-17 93.2 145 57.2
MD04G1240400 Malus domestica HOM05D000924 ORTHO05D001209 1.8e-17 92.8 146 57.5
MD12G1257300 Malus domestica HOM05D000924 ORTHO05D001209 1.8e-17 92.8 146 58.9
arahy.Tifrunner.gnm1.ann1.L2QDU1 Arachis hypogaea HOM05D000924 ORTHO05D001209 2.3e-17 92.4 146 55.5
RcHm_v2.0_Chr7g0209461 Rosa chinensis HOM05D000924 ORTHO05D001209 2.3e-17 92.4 148 56.8
Dinv10292 Davidia involucrata HOM05D000924 ORTHO05D001209 3.0e-17 92.0 147 57.1
MSTRG.1010 Avicennia marina HOM05D000924 ORTHO05D001209 3.9e-17 91.7 144 57.6
arahy.Tifrunner.gnm1.ann1.1JT8J9 Arachis hypogaea HOM05D000924 ORTHO05D001209 5.1e-17 91.3 146 54.8
arahy.Tifrunner.gnm1.ann1.JY4JA5 Arachis hypogaea HOM05D000924 ORTHO05D001209 5.1e-17 91.3 146 54.8
FvH4_5g21940 Fragaria vesca HOM05D000924 ORTHO05D001209 6.7e-17 90.9 147 57.8
FAN18G2116 Fragaria x ananassa HOM05D000924 ORTHO05D001209 6.7e-17 90.9 147 57.8
Prupe.6G358100 Prunus persica HOM05D000924 ORTHO05D001209 6.7e-17 90.9 146 58.2
Actinidia17090 Actinidia chinensis HOM05D000924 ORTHO05D001209 8.7e-17 90.5 144 54.9
FAN08G2720 Fragaria x ananassa HOM05D000924 ORTHO05D001209 8.7e-17 90.5 148 57.4
Gohir.A10G187300 Gossypium hirsutum HOM05D000924 ORTHO05D001209 8.7e-17 90.5 144 57.6
Lj5A314T76 Lonicera japonica HOM05D000924 ORTHO05D001209 1.5e-16 89.7 145 55.9
SGA_v2.0_scaffold161G37860 Striga asiatica HOM05D000924 ORTHO05D001209 1.5e-16 89.7 144 57.6
HanXRQChr17g0533721 Helianthus annuus HOM05D000924 ORTHO05D001209 1.9e-16 89.4 145 55.2
Peaxi162Scf00064g01426 Petunia axillaris HOM05D000924 ORTHO05D001209 1.9e-16 89.4 145 49.7
Cpa.g.sc36.108 Carica papaya HOM05D000924 ORTHO05D001209 2.5e-16 89.0 145 55.9
COL.COLO4_20702 Corchorus olitorius HOM05D000924 ORTHO05D001209 2.5e-16 89.0 144 56.2
Migut.C00343 Erythranthe guttata HOM05D000924 ORTHO05D001209 2.5e-16 89.0 139 57.6
Phvul.005G055300 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 3.3e-16 88.6 145 54.5
FAN13G1554 Fragaria x ananassa HOM05D000924 ORTHO05D001209 4.3e-16 88.2 146 56.8
Sc15g0004020 Simmondsia chinensis HOM05D000924 ORTHO05D001209 4.3e-16 88.2 142 57.0
TAR369G0929 Trochodendron aralioides HOM05D000924 ORTHO05D001209 4.3e-16 88.2 139 56.1
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 4.3e-16 88.2 145 56.6
MELO3C006732.2 Cucumis melo HOM05D000924 ORTHO05D001209 5.7e-16 87.8 144 58.3
CsaV3_3G015340 Cucumis sativus L. HOM05D000924 ORTHO05D001209 5.7e-16 87.8 144 58.3
Gohir.D10G194400 Gossypium hirsutum HOM05D000924 ORTHO05D001209 5.7e-16 87.8 144 56.9
Gorai.011G217300 Gossypium raimondii HOM05D000924 ORTHO05D001209 5.7e-16 87.8 144 56.9
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 5.7e-16 87.8 142 56.3
Cfa014157 Carpinus fangiana HOM05D000924 ORTHO05D001209 7.4e-16 87.4 105 53.3
Haze_22879 Corylus avellana HOM05D000924 ORTHO05D001209 7.4e-16 87.4 105 53.3
Lsat_1_v5_gn_3_7441 Lactuca sativa HOM05D000924 ORTHO05D001209 9.7e-16 87.0 146 54.1
PGR083G1659 Punica granatum HOM05D000924 ORTHO05D001209 9.7e-16 87.0 145 57.2
QL10p013857 Quercus lobata HOM05D000924 ORTHO05D001209 9.7e-16 87.0 135 54.1
CSS0036316 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 1.3e-15 86.7 147 55.1
Ciclev10010890m.g Citrus clementina HOM05D000924 ORTHO05D001209 1.6e-15 86.3 145 56.6
ClCG05G006710 Citrullus lanatus HOM05D000924 ORTHO05D001209 2.8e-15 85.5 144 57.6
COL.COLO4_18725 Corchorus olitorius HOM05D000924 ORTHO05D001209 2.8e-15 85.5 140 55.0
CANSAT80G1721 Cannabis sativa HOM05D000924 ORTHO05D001209 3.7e-15 85.1 147 55.8
Migut.N01909 Erythranthe guttata HOM05D000924 ORTHO05D001209 3.7e-15 85.1 141 53.2
Potri.012G097300 Populus trichocarpa HOM05D000924 ORTHO05D001209 3.7e-15 85.1 149 47.7
Glyma.08G173500 Glycine max HOM05D000924 ORTHO05D001209 4.8e-15 84.7 141 51.1
ClCG05G013070 Citrullus lanatus HOM05D000924 ORTHO05D001209 8.2e-15 84.0 140 48.6
Thhalv10016123m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 8.2e-15 84.0 102 52.0
Lj5C314G2 Lonicera japonica HOM05D000924 ORTHO05D001209 8.2e-15 84.0 142 52.1
TPR.G10336 Trifolium pratense HOM05D000924 ORTHO05D001209 8.2e-15 84.0 142 55.6
ClCG11G018370 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.1e-14 83.6 144 53.5
TWI14G0143 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 1.1e-14 83.6 146 51.4
Haze_17095 Corylus avellana HOM05D000924 ORTHO05D001209 1.4e-14 83.2 105 50.5
TPR.G25887 Trifolium pratense HOM05D000924 ORTHO05D001209 1.4e-14 83.2 146 54.1
VMungo1080G0748 Vigna mungo HOM05D000924 ORTHO05D001209 1.4e-14 83.2 145 53.8
Sabra15G0116500 Salix brachista HOM05D000924 ORTHO05D001209 1.8e-14 82.8 145 49.7
Glyma.15G253800 Glycine max HOM05D000924 ORTHO05D001209 2.4e-14 82.4 141 52.5
THA.LOC104812019 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 2.4e-14 82.4 137 55.5
AL1G33990 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 3.1e-14 82.0 103 50.5
CANSAT78G0159 Cannabis sativa HOM05D000924 ORTHO05D001209 3.1e-14 82.0 135 48.1
Carub.0001s2043 Capsella rubella HOM05D000924 ORTHO05D001209 3.1e-14 82.0 103 50.5
ECA246G0163 Erigeron canadensis HOM05D000924 ORTHO05D001209 3.1e-14 82.0 105 48.6
Thhalv10006525m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 3.1e-14 82.0 103 50.5
Nn6g31594 Nelumbo nucifera HOM05D000924 ORTHO05D001209 3.1e-14 82.0 146 48.6
Potri.015G095500 Populus trichocarpa HOM05D000924 ORTHO05D001209 4.1e-14 81.6 145 50.3
AUR62032373 Chenopodium quinoa HOM05D000924 ORTHO05D001209 5.3e-14 81.3 141 53.9
Cc02_g28440 Coffea canephora HOM05D000924 ORTHO05D001209 6.9e-14 80.9 104 50.0
Duzib128G1905 Durio zibethinus HOM05D000924 ORTHO05D001209 6.9e-14 80.9 144 54.2
Lsat_1_v5_gn_3_7501 Lactuca sativa HOM05D000924 ORTHO05D001209 6.9e-14 80.9 105 48.6
Medtr2g064740 Medicago truncatula HOM05D000924 ORTHO05D001209 9.0e-14 80.5 143 54.5
Thecc.10G149400 Theobroma cacao HOM05D000924 ORTHO05D001209 1.2e-13 80.1 143 53.1
Eucgr.F01825 Eucalyptus grandis HOM05D000924 ORTHO05D001209 1.5e-13 79.7 103 50.5
MBI15_g36602_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 2.0e-13 79.3 142 55.6
AL4G40630 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 2.6e-13 79.0 104 46.2
CARHR021420 Cardamine hirsuta HOM05D000924 ORTHO05D001209 2.6e-13 79.0 103 48.5
AT1G20960 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 3.4e-13 78.6 103 49.5
BcaC06g34852 Brassica carinata HOM05D000924 ORTHO05D001209 3.4e-13 78.6 106 48.1
A07p15350 Brassica napus HOM05D000924 ORTHO05D001209 3.4e-13 78.6 106 48.1
C07p22650 Brassica napus HOM05D000924 ORTHO05D001209 3.4e-13 78.6 106 48.1
BolC7t42794H Brassica oleracea HOM05D000924 ORTHO05D001209 3.4e-13 78.6 106 48.1
BraA07t29275Z Brassica rapa HOM05D000924 ORTHO05D001209 3.4e-13 78.6 106 48.1
Ca_03699_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 5.9e-13 77.8 142 54.2
PSO782G5199 Papaver somniferum HOM05D000924 ORTHO05D001209 5.9e-13 77.8 142 50.7
Sp1g18660 Schrenkiella parvula HOM05D000924 ORTHO05D001209 5.9e-13 77.8 106 47.2
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 7.6e-13 77.4 135 40.0
SHI31129 Sapria himalayana HOM05D000924 ORTHO05D001209 7.6e-13 77.4 146 53.4
Aqoxy3G02568 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 1.0e-12 77.0 142 54.9
unitig_26.g9847 Utricularia gibba HOM05D000924 ORTHO05D001209 1.3e-12 76.6 104 48.1
CDE06G2318 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 2.2e-12 75.9 104 48.1
PSO063G7524 Papaver somniferum HOM05D000924 ORTHO05D001209 2.2e-12 75.9 142 43.0
CARHR137320 Cardamine hirsuta HOM05D000924 ORTHO05D001209 2.9e-12 75.5 103 44.7
BcaB03g14290 Brassica carinata HOM05D000924 ORTHO05D001209 5.0e-12 74.7 106 46.2
BcaC01g05308 Brassica carinata HOM05D000924 ORTHO05D001209 5.0e-12 74.7 104 45.2
Ciclev10004124m.g Citrus clementina HOM05D000924 ORTHO05D001209 5.0e-12 74.7 103 47.6
Cc05_g03360 Coffea canephora HOM05D000924 ORTHO05D001209 5.0e-12 74.7 144 39.6
Nitab4.5_0009811g0020 Nicotiana tabacum HOM05D000924 ORTHO05D001209 8.5e-12 73.9 76 80.3
A02p10320 Brassica napus HOM05D000924 ORTHO05D001209 1.1e-11 73.6 107 46.7
C02p17050 Brassica napus HOM05D000924 ORTHO05D001209 1.1e-11 73.6 107 46.7
BolC2t07803H Brassica oleracea HOM05D000924 ORTHO05D001209 1.1e-11 73.6 107 46.7
BraA02t06099Z Brassica rapa HOM05D000924 ORTHO05D001209 1.1e-11 73.6 107 46.7
CDE07G1660 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 1.1e-11 73.6 105 46.7
C03p28130 Brassica napus HOM05D000924 ORTHO05D001209 1.4e-11 73.2 103 43.7
BolC3t15183H Brassica oleracea HOM05D000924 ORTHO05D001209 1.4e-11 73.2 103 43.7
Rhsim06G0001600 Rhododendron simsii HOM05D000924 ORTHO05D001209 1.9e-11 72.8 106 46.2
Zm00001eb328850 Zea mays HOM05D000924 ORTHO05D001209 1.9e-11 72.8 147 41.5
FvH4_6g00860 Fragaria vesca HOM05D000924 ORTHO05D001209 2.5e-11 72.4 146 41.1
FAN14G0455 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.5e-11 72.4 146 41.1
FAN05G2437 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.2e-11 72.0 145 39.3
Aa31LG7G5140 Aethionema arabicum HOM05D000924 ORTHO05D001209 4.2e-11 71.6 104 46.2
PGSC0003DMG400030366 Solanum tuberosum HOM05D000924 ORTHO05D001209 5.5e-11 71.2 148 50.7
Ah.01g015930 Amaranthus hybridus HOM05D000924 ORTHO05D001209 7.2e-11 70.9 101 46.5
EL10Ac2g02545 Beta vulgaris HOM05D000924 ORTHO05D001209 7.2e-11 70.9 137 46.0
CBR_g70690 Chara braunii HOM05D000924 ORTHO05D001209 7.2e-11 70.9 100 45.0
Os02g0106966 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D001209 9.4e-11 70.5 107 43.0
QL04p003238 Quercus lobata HOM05D000924 ORTHO05D001209 9.4e-11 70.5 81 54.3
AUR62024847 Chenopodium quinoa HOM05D000924 ORTHO05D001209 1.2e-10 70.1 98 42.9
Nitab4.5_0000110g0580 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.2e-10 70.1 94 50.0
Sopen06g033490 Solanum pennellii HOM05D000924 ORTHO05D001209 1.2e-10 70.1 144 50.7
FvH4_6g47191 Fragaria vesca HOM05D000924 ORTHO05D001209 1.6e-10 69.7 95 43.2
FAN09G1765 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.6e-10 69.7 145 40.0
CSS0008681 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 2.1e-10 69.3 138 51.4
Carub.0004s2461 Capsella rubella HOM05D000924 ORTHO05D001209 2.1e-10 69.3 104 43.3
AT2G42270 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 3.6e-10 68.6 103 42.7
Lj3g0017691 Lotus japonicus HOM05D000924 ORTHO05D001209 3.6e-10 68.6 93 49.5
SMO347G0607 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 3.6e-10 68.6 101 45.5
Pp3c1_35880 Physcomitrium patens HOM05D000924 ORTHO05D001209 6.1e-10 67.8 102 47.1
AL5G18660 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 7.9e-10 67.4 96 46.9
BraA08t33566Z Brassica rapa HOM05D000924 ORTHO05D001209 7.9e-10 67.4 106 42.5
CAN.G993.32 Capsicum annuum HOM05D000924 ORTHO05D001209 7.9e-10 67.4 87 47.1
AUR62024846 Chenopodium quinoa HOM05D000924 ORTHO05D001209 1.8e-09 66.2 96 45.8
GSVIVG01010769001 Vitis vinifera HOM05D000924 ORTHO05D001209 1.8e-09 66.2 91 46.2
Aa31LG6G12910 Aethionema arabicum HOM05D000924 ORTHO05D001209 2.3e-09 65.9 90 45.6
Lsat_1_v5_gn_4_157361 Lactuca sativa HOM05D000924 ORTHO05D001209 3.9e-09 65.1 95 48.4
Mapoly0043s0081 Marchantia polymorpha HOM05D000924 ORTHO05D001209 5.1e-09 64.7 101 45.5
Os03g0743800 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D001209 8.8e-09 63.9 98 39.8
Nitab4.5_0007467g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.1e-08 63.5 80 48.8
vmacro14714 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 2.5e-08 62.4 142 50.0
FAN13G2240 Fragaria x ananassa HOM05D000924 ORTHO05D001209 4.3e-08 61.6 141 40.4
Medtr4g011450 Medicago truncatula HOM05D000924 ORTHO05D001209 5.7e-08 61.2 97 42.3
ATR0605G032 Amborella trichopoda HOM05D000924 ORTHO05D001209 1.3e-07 60.1 99 43.4
TWI36G0693 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 1.3e-07 60.1 129 48.8
Lalb_Chr25g0285181 Lupinus albus HOM05D000924 ORTHO05D001209 1.7e-07 59.7 84 46.4
MD09G1063000 Malus domestica HOM05D000924 ORTHO05D001209 1.7e-07 59.7 100 40.0
Oeu060274.1 Olea europaea HOM05D000924 ORTHO05D001209 1.7e-07 59.7 82 48.8
SEGI_01233 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 1.7e-07 59.7 99 44.4
Nitab4.5_0004954g0020 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.8e-07 58.9 111 55.0
SEGI_03458 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 2.8e-07 58.9 98 44.9
BcaC03g14318 Brassica carinata HOM05D000924 ORTHO05D001209 3.7e-07 58.5 99 42.4
MCO02G020 Micromonas commoda HOM05D000924 ORTHO05D001209 1.1e-06 57.0 103 38.8
BcaC05g26004 Brassica carinata HOM05D000924 ORTHO05D001209 1.4e-06 56.6 105 37.1
C05p19630 Brassica napus HOM05D000924 ORTHO05D028009 1.4e-06 56.6 105 37.1
Solyc06g071620.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 1.4e-06 56.6 115 33.0
BcaB03g11743 Brassica carinata HOM05D000924 ORTHO05D001209 1.8e-06 56.2 108 40.7
BcaB05g25201 Brassica carinata HOM05D000924 ORTHO05D001209 2.4e-06 55.8 84 44.0
Cre17.g744147 Chlamydomonas reinhardtii HOM05D000924 ORTHO05D001209 2.4e-06 55.8 98 35.7
Nitab4.5_0001515g0080 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.4e-06 55.8 141 37.6
FAN14G3354 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.1e-06 55.5 81 44.4
RcHm_v2.0_Chr3g0448351 Rosa chinensis HOM05D000924 ORTHO05D001209 4.1e-06 55.1 92 42.4
A02p22840 Brassica napus HOM05D000924 ORTHO05D001209 9.1e-06 53.9 102 37.3


User provided reference genes

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