Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003565g0060 Nicotiana tabacum HOM05D005043 ORTHO05D006182 3.4e-121 438.3 219 100.0
Nitab4.5_0006953g0040 Nicotiana tabacum HOM05D005043 ORTHO05D006182 4.4e-105 384.8 271 75.6
Peaxi162Scf00111g01457 Petunia axillaris HOM05D005043 ORTHO05D006182 9.9e-81 303.9 344 51.2
Solyc07g062430.3 Solanum lycopersicum HOM05D005043 ORTHO05D006182 1.3e-80 303.5 341 51.9
Sopen07g030670 Solanum pennellii HOM05D005043 ORTHO05D006182 1.3e-80 303.5 341 51.6
CAN.G375.16 Capsicum annuum HOM05D005043 ORTHO05D006182 7.1e-79 297.7 341 50.4
PGSC0003DMG400007070 Solanum tuberosum HOM05D005043 ORTHO05D006182 9.3e-79 297.4 335 52.2
Dinv18365 Davidia involucrata HOM05D005043 ORTHO05D006182 3.6e-54 215.7 324 39.5
Oeu031030.1 Olea europaea HOM05D005043 ORTHO05D006182 6.1e-54 214.9 349 39.0
Migut.M00727 Erythranthe guttata HOM05D005043 ORTHO05D006182 4.3e-52 208.8 329 38.6
Cc05_g11070 Coffea canephora HOM05D005043 ORTHO05D006182 1.8e-50 203.4 346 36.1
Ciclev10023741m.g Citrus clementina HOM05D005043 ORTHO05D006182 2.4e-50 203.0 339 38.1
Hma1.2p1_0290F.1_g114850 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 9.1e-50 201.1 346 37.3
Lj1C829T6 Lonicera japonica HOM05D005043 ORTHO05D006182 9.1e-50 201.1 327 37.9
MSTRG.12865 Avicennia marina HOM05D005043 ORTHO05D006182 1.2e-49 200.7 327 37.9
Atru.chr2.2132 Acer truncatum HOM05D005043 ORTHO05D006182 4.5e-49 198.7 327 37.9
TAR636G1993 Trochodendron aralioides HOM05D005043 ORTHO05D006182 4.5e-49 198.7 346 36.7
PGR083G1657 Punica granatum HOM05D005043 ORTHO05D006182 1.3e-48 197.2 344 37.2
Manes.15G094900 Manihot esculenta HOM05D005043 ORTHO05D006182 3.8e-48 195.7 343 37.6
Prupe.4G164600 Prunus persica HOM05D005043 ORTHO05D006182 3.8e-48 195.7 348 35.6
GSVIVG01014196001 Vitis vinifera HOM05D005043 ORTHO05D006182 3.8e-48 195.7 349 37.0
Rhsim06G0208200 Rhododendron simsii HOM05D005043 ORTHO05D006182 6.5e-48 194.9 346 36.4
Gohir.D01G042722 Gossypium hirsutum HOM05D005043 ORTHO05D006182 1.1e-47 194.1 332 37.0
Gorai.002G054600 Gossypium raimondii HOM05D005043 ORTHO05D006182 1.1e-47 194.1 332 37.0
Gohir.A01G054300 Gossypium hirsutum HOM05D005043 ORTHO05D006182 2.5e-47 193.0 332 36.7
SGA_v2.0_scaffold70G23376 Striga asiatica HOM05D005043 ORTHO05D006182 3.2e-47 192.6 340 35.9
MD11G1263900 Malus domestica HOM05D005043 ORTHO05D006182 7.2e-47 191.4 346 35.5
BolC3t17001H Brassica oleracea HOM05D005043 ORTHO05D006182 5.1e-45 185.3 347 34.9
Potri.001G390500 Populus trichocarpa HOM05D005043 ORTHO05D006182 5.1e-45 185.3 334 36.8
Sed0006465 Sechium edule HOM05D005043 ORTHO05D006182 5.1e-45 185.3 330 34.8
TWI38G0078 Tripterygium wilfordii HOM05D005043 ORTHO05D006182 5.1e-45 185.3 328 35.1
CiPaw.11G160200 Carya illinoinensis HOM05D005043 ORTHO05D006182 6.7e-45 184.9 327 37.0
RcHm_v2.0_Chr5g0030901 Rosa chinensis HOM05D005043 ORTHO05D006182 6.7e-45 184.9 335 35.5
COL.COLO4_17542 Corchorus olitorius HOM05D005043 ORTHO05D006182 8.8e-45 184.5 325 36.3
Sp3g13100 Schrenkiella parvula HOM05D005043 ORTHO05D006182 8.8e-45 184.5 358 34.6
C03p47310 Brassica napus HOM05D005043 ORTHO05D006182 2.0e-44 183.3 347 34.9
CANSAT35G1445 Cannabis sativa HOM05D005043 ORTHO05D006182 4.4e-44 182.2 334 35.9
Eucgr.F01242 Eucalyptus grandis HOM05D005043 ORTHO05D006182 5.7e-44 181.8 350 34.0
Ca_26224_v3 Cicer arietinum L. HOM05D005043 ORTHO05D006182 1.3e-43 180.6 337 36.8
PSO478G3490 Papaver somniferum HOM05D005043 ORTHO05D006182 1.7e-43 180.3 326 36.5
THA.LOC104822566 Tarenaya hassleriana HOM05D005043 ORTHO05D006182 1.7e-43 180.3 349 35.2
A05p34520 Brassica napus HOM05D005043 ORTHO05D006182 8.2e-43 177.9 358 34.1
BraA05t22272Z Brassica rapa HOM05D005043 ORTHO05D006182 8.2e-43 177.9 358 34.1
BcaB06g25330 Brassica carinata HOM05D005043 ORTHO05D006182 1.1e-42 177.6 358 34.4
A03p39040 Brassica napus HOM05D005043 ORTHO05D006182 1.1e-42 177.6 345 34.8
BraA03t13053Z Brassica rapa HOM05D005043 ORTHO05D006182 1.1e-42 177.6 345 34.8
Medtr6g466500 Medicago truncatula HOM05D005043 ORTHO05D006182 1.1e-42 177.6 344 35.5
BcaB06g29516 Brassica carinata HOM05D005043 ORTHO05D006182 1.8e-42 176.8 358 34.1
C05p52260 Brassica napus HOM05D005043 ORTHO05D006182 2.4e-42 176.4 359 34.0
Lsat_1_v5_gn_9_99860 Lactuca sativa HOM05D005043 ORTHO05D006182 2.4e-42 176.4 310 37.4
AL3G27210 Arabidopsis lyrata HOM05D005043 ORTHO05D006182 3.1e-42 176.0 361 33.2
Sabra16G0255900 Salix brachista HOM05D005043 ORTHO05D006182 3.1e-42 176.0 335 36.4
HanXRQChr13g0390281 Helianthus annuus HOM05D005043 ORTHO05D006182 6.9e-42 174.9 327 34.3
SalBow1G3547 Salvia bowleyana HOM05D005043 ORTHO05D006182 9.1e-42 174.5 315 37.1
Thecc.07G117100 Theobroma cacao HOM05D005043 ORTHO05D006182 1.2e-41 174.1 326 35.6
Carub.0003s1455 Capsella rubella HOM05D005043 ORTHO05D006182 1.5e-41 173.7 359 33.1
CARHR089830 Cardamine hirsuta HOM05D005043 ORTHO05D006182 1.5e-41 173.7 358 33.8
ClCG11G017440 Citrullus lanatus HOM05D005043 ORTHO05D006182 1.5e-41 173.7 356 33.1
Cpa.g.sc77.9 Carica papaya HOM05D005043 ORTHO05D006182 3.4e-41 172.6 332 34.3
Duzib213G0837 Durio zibethinus HOM05D005043 ORTHO05D006182 3.4e-41 172.6 333 33.9
Nn7g37328 Nelumbo nucifera HOM05D005043 ORTHO05D006182 3.4e-41 172.6 365 32.3
BolC5t33915H Brassica oleracea HOM05D005043 ORTHO05D006182 7.7e-41 171.4 353 33.7
ECA240G3232 Erigeron canadensis HOM05D005043 ORTHO05D006182 7.7e-41 171.4 306 36.9
Lalb_Chr03g0031161 Lupinus albus HOM05D005043 ORTHO05D006182 1.0e-40 171.0 336 35.4
SalBow8G1024 Salvia bowleyana HOM05D005043 ORTHO05D006182 1.0e-40 171.0 324 36.1
EL10Ac4g08345 Beta vulgaris HOM05D005043 ORTHO05D006182 1.3e-40 170.6 349 34.7
HanXRQChr12g0362951 Helianthus annuus HOM05D005043 ORTHO05D006182 1.7e-40 170.2 328 34.1
Thhalv10020510m.g Eutrema salsugineum HOM05D005043 ORTHO05D006182 2.9e-40 169.5 354 32.5
arahy.Tifrunner.gnm1.ann1.NUK3H0 Arachis hypogaea HOM05D005043 ORTHO05D006182 8.5e-40 167.9 317 36.0
CsaV3_4G033100 Cucumis sativus L. HOM05D005043 ORTHO05D006182 1.1e-39 167.5 350 33.1
AT3G14890 Arabidopsis thaliana HOM05D005043 ORTHO05D006182 3.2e-39 166.0 361 32.1
PSO782G2110 Papaver somniferum HOM05D005043 ORTHO05D006182 4.2e-39 165.6 340 35.0
Phvul.011G162300 Phaseolus vulgaris HOM05D005043 ORTHO05D006182 5.5e-39 165.2 336 33.6
DCAR_017172 Daucus carota HOM05D005043 ORTHO05D006182 7.2e-39 164.9 315 36.2
Haze_09322 Corylus avellana HOM05D005043 ORTHO05D006182 1.6e-38 163.7 368 33.2
FAN25G1853 Fragaria x ananassa HOM05D005043 ORTHO05D006182 1.6e-38 163.7 322 34.8
FAN21G3659 Fragaria x ananassa HOM05D005043 ORTHO05D006182 2.7e-38 162.9 322 34.5
AUR62019576 Chenopodium quinoa HOM05D005043 ORTHO05D006182 3.6e-38 162.5 363 32.0
Glyma.12G157700 Glycine max HOM05D005043 ORTHO05D006182 3.6e-38 162.5 357 31.9
PSO384G1010 Papaver somniferum HOM05D005043 ORTHO05D006182 3.6e-38 162.5 365 33.7
MBI06_g29324_MAGBIO Magnolia biondii HOM05D005043 ORTHO05D006182 1.0e-37 161.0 430 30.5
arahy.Tifrunner.gnm1.ann1.5E18AM Arachis hypogaea HOM05D005043 ORTHO05D006182 1.4e-37 160.6 323 35.0
FAN11G3478 Fragaria x ananassa HOM05D005043 ORTHO05D006182 2.3e-37 159.8 322 34.5
FvH4_3g18270 Fragaria vesca HOM05D005043 ORTHO05D006182 3.0e-37 159.5 322 34.5
FAN16G3394 Fragaria x ananassa HOM05D005043 ORTHO05D006182 5.2e-37 158.7 322 34.2
Aqoxy7G03872 Aquilegia oxysepala HOM05D005043 ORTHO05D006182 6.7e-37 158.3 317 33.1
CDE09G1444 Ceratophyllum demersum HOM05D005043 ORTHO05D006182 2.0e-36 156.8 345 31.9
vmacro11941 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 4.4e-36 155.6 453 28.7
TPR.G12585 Trifolium pratense HOM05D005043 ORTHO05D006182 7.0e-34 148.3 309 34.0
VMungo1127G0129 Vigna mungo HOM05D005043 ORTHO05D006182 1.0e-29 134.4 424 27.4
Psat3g077040 Pisum sativum HOM05D005043 ORTHO05D006182 5.2e-29 132.1 200 42.5
Lalb_Chr19g0133801 Lupinus albus HOM05D005043 ORTHO05D006182 5.7e-28 128.6 248 37.1
QL08p026231 Quercus lobata HOM05D005043 ORTHO05D006182 7.5e-28 128.3 86 67.4
vmacro23467 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 6.3e-27 125.2 85 67.1
Aa31LG8G2100 Aethionema arabicum HOM05D005043 ORTHO05D006182 1.1e-26 124.4 84 66.7
Glyma.06G229100 Glycine max HOM05D005043 ORTHO05D006182 1.1e-26 124.4 89 61.8
Thecc.07G116500 Theobroma cacao HOM05D005043 ORTHO05D006182 3.1e-26 122.9 85 67.1
MELO3C025641.2 Cucumis melo HOM05D005043 ORTHO05D006182 5.3e-26 122.1 308 31.5
AUR62042780 Chenopodium quinoa HOM05D005043 ORTHO05D006182 9.1e-26 121.3 83 63.9
arahy.Tifrunner.gnm1.ann1.5IY6XE Arachis hypogaea HOM05D005043 ORTHO05D006182 2.0e-25 120.2 86 65.1
Lj3g0009561 Lotus japonicus HOM05D005043 ORTHO05D006182 3.5e-25 119.4 304 30.9
arahy.Tifrunner.gnm1.ann1.3VV2Z3 Arachis hypogaea HOM05D005043 ORTHO05D006182 4.5e-25 119.0 86 65.1
HPP92_009836 Vanilla planifolia HOM05D005043 ORTHO05D006182 7.7e-25 118.2 80 66.2
Ah.04g164250 Amaranthus hybridus HOM05D005043 ORTHO05D006182 1.0e-24 117.9 83 62.7
vmacro23385 Vaccinium macrocarpon HOM05D005043 ORTHO05D006182 1.3e-24 117.5 173 43.4
BcaNung07105 Brassica carinata HOM05D005043 ORTHO05D006182 6.5e-24 115.2 158 41.8
unitig_749.g13541 Utricularia gibba HOM05D005043 ORTHO05D006182 8.5e-24 114.8 83 57.8
CSS0038261 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 1.0e-21 107.8 93 52.7
Mapoly0056s0069 Marchantia polymorpha HOM05D005043 ORTHO05D006182 1.4e-21 107.5 79 60.8
QL08p026221 Quercus lobata HOM05D005043 ORTHO05D006182 1.2e-20 104.4 150 43.3
SMO137G0206 Selaginella moellendorffii HOM05D005043 ORTHO05D006182 4.4e-20 102.4 83 57.8
Hund10554 Selenicereus undatus HOM05D005043 ORTHO05D006182 1.7e-19 100.5 92 54.3
MSTRG.9725 Avicennia marina HOM05D005043 ORTHO05D000110 2.2e-19 100.1 82 57.3
AUR62042782 Chenopodium quinoa HOM05D005043 ORTHO05D006182 4.8e-19 99.0 155 41.3
PSO478G1721 Papaver somniferum HOM05D005043 ORTHO05D006182 1.1e-18 97.8 99 52.5
PSO782G5034 Papaver somniferum HOM05D005043 ORTHO05D006182 1.4e-18 97.4 110 49.1
Pp3c6_17140 Physcomitrium patens HOM05D005043 ORTHO05D006182 4.1e-18 95.9 83 53.0
Sc16g0007590 Simmondsia chinensis HOM05D005043 ORTHO05D006182 9.1e-18 94.7 153 38.6
Medtr6g052000 Medicago truncatula HOM05D005043 ORTHO05D006182 1.2e-17 94.4 93 53.8
ATR1131G028 Amborella trichopoda HOM05D005043 ORTHO05D006182 7.7e-17 91.7 306 26.1
Psat3g076960 Pisum sativum HOM05D005043 ORTHO05D006182 1.0e-16 91.3 81 58.0
SEGI_37980 Sequoiadendron giganteum HOM05D005043 ORTHO05D006182 3.2e-15 86.3 80 48.8
RcHm_v2.0_Chr5g0030891 Rosa chinensis HOM05D005043 ORTHO05D006182 1.2e-14 84.3 137 40.9
ECA240G0297 Erigeron canadensis HOM05D005043 ORTHO05D006182 1.6e-14 84.0 83 48.2
MCO04G542 Micromonas commoda HOM05D005043 ORTHO05D006182 1.6e-14 84.0 67 53.7
Psat3g076840 Pisum sativum HOM05D005043 ORTHO05D006182 1.6e-14 84.0 81 55.6
CBR_g66772 Chara braunii HOM05D005043 ORTHO05D006182 2.1e-14 83.6 349 24.6
Psat3g076920 Pisum sativum HOM05D005043 ORTHO05D006182 2.1e-14 83.6 81 55.6
Os01g0737300 Oryza sativa ssp. japonica HOM05D005043 ORTHO05D006182 6.1e-14 82.0 141 36.2
Zm00001eb153930 Zea mays HOM05D005043 ORTHO05D006182 9.8e-12 74.7 121 32.2
Cre09.g388726 Chlamydomonas reinhardtii HOM05D005043 ORTHO05D006182 1.1e-10 71.2 135 31.9
CSS0012296 Camellia sinensis var. sinensis HOM05D005043 ORTHO05D006182 4.1e-10 69.3 35 82.9
PRCOL_00001017 Prasinoderma coloniale HOM05D005043 ORTHO05D006182 2.0e-09 67.0 68 44.1
TPR.G17654 Trifolium pratense HOM05D005043 ORTHO05D006182 1.3e-08 64.3 52 59.6
Mapoly0030s0138 Marchantia polymorpha HOM05D001448 ORTHO05D005781 4.3e-07 59.3 79 38.0
AagrBONN_evm.TU.Sc2ySwM_228.1872 Anthoceros agrestis HOM05D005043 ORTHO05D006182 7.3e-07 58.5 104 35.6
Mapoly0154s0015 Marchantia polymorpha HOM05D001448 ORTHO05D005781 1.2e-06 57.8 79 39.2
Os01g0737401 Oryza sativa ssp. japonica HOM05D005043 ORTHO05D006182 1.2e-06 57.8 33 72.7
CBR_g1120 Chara braunii HOM05D001448 ORTHO05D005781 1.6e-06 57.4 81 39.5
CDE09G1103 Ceratophyllum demersum HOM05D001448 ORTHO05D005781 2.8e-06 56.6 105 34.3
Medtr6g464930 Medicago truncatula HOM05D005043 ORTHO05D006182 3.6e-06 56.2 46 52.2
Lj2C1155G3 Lonicera japonica HOM05D001448 ORTHO05D005781 6.1e-06 55.5 80 37.5
Atru.chr5.1640 Acer truncatum HOM05D001448 ORTHO05D005781 8.0e-06 55.1 85 34.1
SEGI_22534 Sequoiadendron giganteum HOM05D001448 ORTHO05D005781 8.0e-06 55.1 111 29.7


User provided reference genes

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