Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.0e-216 756.5 407 100.0
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 3.1e-176 622.1 405 84.4
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 5.4e-173 611.3 445 77.1
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.3e-171 605.9 407 81.8
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 3.3e-170 602.1 398 80.4
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.3e-168 595.9 406 81.0
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 7.6e-143 511.1 418 71.3
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 2.9e-142 509.2 391 69.3
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 6.0e-140 501.5 411 69.1
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 3.0e-139 499.2 404 69.3
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 4.3e-138 495.4 405 69.1
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 5.6e-138 495.0 409 68.7
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 1.3e-137 493.8 376 71.5
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.6e-137 493.4 394 68.0
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 2.8e-137 492.7 407 68.1
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 5.3e-136 488.4 383 66.8
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 5.3e-136 488.4 383 66.8
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.0e-135 486.5 382 71.5
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.6e-135 486.1 404 65.8
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 2.2e-134 483.0 397 66.8
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.9e-134 482.6 384 66.4
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 6.4e-134 481.5 390 66.9
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.1e-133 480.7 418 65.6
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 2.5e-133 479.6 393 67.2
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.1e-133 478.0 384 66.1
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 7.1e-133 478.0 402 67.7
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 9.3e-133 477.6 407 63.1
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 1.2e-132 477.2 395 64.8
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.2e-132 477.2 385 70.1
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 3.5e-132 475.7 384 68.8
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 4.6e-132 475.3 388 65.2
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 4.6e-132 475.3 400 67.0
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 4.6e-132 475.3 406 65.5
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 6.0e-132 474.9 414 64.0
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 7.9e-132 474.6 380 67.6
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 1.8e-131 473.4 404 63.6
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 3.9e-131 472.2 383 66.1
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 5.1e-131 471.9 397 63.7
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 8.7e-131 471.1 410 63.7
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.1e-130 470.7 399 64.4
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 7.4e-130 468.0 384 65.1
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 1.3e-129 467.2 393 67.9
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.3e-129 467.2 403 66.0
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 2.8e-129 466.1 403 62.8
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.1e-128 464.2 397 63.5
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 3.1e-128 462.6 401 64.1
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.2e-127 460.7 389 66.8
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.2e-127 460.7 463 59.0
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 2.0e-127 459.9 378 68.8
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 2.6e-127 459.5 387 67.4
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.0e-126 457.6 335 70.7
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 3.8e-126 455.7 373 70.0
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 1.9e-125 453.4 391 66.8
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 5.5e-125 451.8 391 65.2
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 7.1e-125 451.4 406 63.8
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 7.1e-125 451.4 399 65.4
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.2e-124 450.7 410 64.1
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 4.6e-124 448.7 402 65.2
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 1.0e-123 447.6 391 63.9
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.3e-123 447.2 413 60.3
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 1.8e-123 446.8 384 64.1
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 1.8e-123 446.8 384 64.1
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 3.0e-123 446.0 377 62.1
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 5.7e-122 441.8 373 64.3
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 7.4e-122 441.4 387 62.3
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 7.4e-122 441.4 387 62.3
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 9.7e-122 441.0 400 59.5
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 3.7e-121 439.1 415 61.9
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 3.7e-121 439.1 388 61.9
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.4e-120 437.2 386 61.7
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.8e-120 436.8 393 61.3
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.5e-119 432.2 384 62.8
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 2.9e-118 429.5 387 58.9
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 1.6e-116 423.7 398 58.5
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 2.7e-116 422.9 328 66.2
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 6.1e-116 421.8 411 58.4
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 1.4e-115 420.6 283 75.3
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.9e-115 419.1 402 60.0
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 6.7e-115 418.3 401 57.9
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 3.3e-114 416.0 414 57.2
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 6.9e-112 408.3 293 72.4
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.5e-111 407.1 387 58.9
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.5e-111 407.1 293 72.4
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 1.5e-111 407.1 399 59.4
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 2.2e-110 403.3 401 58.1
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 1.2e-108 397.5 227 83.7
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 3.0e-107 392.9 299 71.9
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 3.0e-107 392.9 288 73.3
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 6.7e-107 391.7 319 65.2
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 7.4e-106 388.3 281 70.5
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 8.2e-105 384.8 318 63.5
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 2.4e-104 383.3 308 64.6
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.3e-102 377.5 426 54.5
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 3.8e-102 375.9 410 56.3
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 2.7e-100 369.8 283 66.4
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.1e-92 343.6 432 47.9
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.8e-91 340.5 275 66.2
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 6.3e-89 332.0 208 77.4
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 4.5e-87 325.9 424 49.8
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.7e-86 323.9 285 58.2
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.7e-86 323.9 414 51.9
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.9e-85 320.5 259 66.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.6e-84 316.2 335 56.4
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 3.6e-84 316.2 241 68.0
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 2.8e-81 306.6 411 49.6
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.8e-80 303.9 244 66.4
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 5.5e-77 292.4 205 72.2
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.0e-67 261.5 147 85.0
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 2.9e-65 253.4 174 71.3
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 3.0e-62 243.4 279 48.0
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 9.5e-61 238.4 232 52.2
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.4e-59 234.6 298 50.0
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.0e-58 230.7 263 52.5
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 4.4e-42 176.4 198 45.5
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.1e-39 167.5 316 35.4
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 3.1e-35 153.7 152 57.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 2.4e-32 144.1 155 52.9
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.5e-29 134.8 201 36.3
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 3.0e-22 110.5 85 68.2
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 4.6e-15 86.7 173 34.1
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 2.6e-10 70.9 104 48.1
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 3.2e-08 63.9 34 82.4
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.2e-08 63.9 129 39.5


User provided reference genes

Program Settings