Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001618g0100 Nicotiana tabacum HOM05D000924 ORTHO05D001209 3.5e-66 255.0 146 100.0
Nitab4.5_0026257g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 8.2e-39 164.1 216 54.2
Nitab4.5_0002503g0090 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.3e-28 130.2 204 50.0
Nitab4.5_0009811g0020 Nicotiana tabacum HOM05D000924 ORTHO05D001209 6.7e-25 117.9 94 80.9
Nitab4.5_0003811g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 5.5e-19 98.2 207 41.5
Nitab4.5_0008569g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.7e-18 95.9 91 68.1
Nitab4.5_0005694g0030 Nicotiana tabacum HOM05D000924 ORTHO05D001209 8.0e-18 94.4 91 68.1
MD04G1240400 Malus domestica HOM05D000924 ORTHO05D001209 5.2e-17 91.7 91 69.2
Nitab4.5_0004994g0070 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.1e-16 90.5 57 84.2
HanXRQChr17g0533721 Helianthus annuus HOM05D000924 ORTHO05D001209 1.5e-16 90.1 90 67.8
Hma1.2p1_0914F.1_g236150 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 3.3e-16 89.0 90 70.0
Lsat_1_v5_gn_3_7441 Lactuca sativa HOM05D000924 ORTHO05D001209 3.3e-16 89.0 91 67.0
Solyc06g082100.4 Solanum lycopersicum HOM05D000924 ORTHO05D001209 3.3e-16 89.0 90 70.0
FvH4_5g21940 Fragaria vesca HOM05D000924 ORTHO05D001209 5.7e-16 88.2 92 68.5
FAN13G1554 Fragaria x ananassa HOM05D000924 ORTHO05D001209 5.7e-16 88.2 92 68.5
FAN18G2116 Fragaria x ananassa HOM05D000924 ORTHO05D001209 5.7e-16 88.2 92 68.5
Manes.18G005100 Manihot esculenta HOM05D000924 ORTHO05D001209 5.7e-16 88.2 91 63.7
Dinv10292 Davidia involucrata HOM05D000924 ORTHO05D001209 9.7e-16 87.4 104 61.5
Actinidia17090 Actinidia chinensis HOM05D000924 ORTHO05D001209 1.3e-15 87.0 90 65.6
FAN08G2720 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.3e-15 87.0 93 67.7
TWI36G0693 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 1.7e-15 86.7 91 65.9
RcHm_v2.0_Chr7g0209461 Rosa chinensis HOM05D000924 ORTHO05D001209 2.2e-15 86.3 93 65.6
Migut.C00343 Erythranthe guttata HOM05D000924 ORTHO05D001209 2.8e-15 85.9 90 71.1
Nn6g31594 Nelumbo nucifera HOM05D000924 ORTHO05D001209 2.8e-15 85.9 91 59.3
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.8e-15 85.9 103 62.1
arahy.Tifrunner.gnm1.ann1.L2QDU1 Arachis hypogaea HOM05D000924 ORTHO05D001209 3.7e-15 85.5 103 59.2
CAN.G1095.6 Capsicum annuum HOM05D000924 ORTHO05D001209 4.8e-15 85.1 90 64.4
Dinv32321 Davidia involucrata HOM05D000924 ORTHO05D001209 6.3e-15 84.7 103 61.2
MD12G1257300 Malus domestica HOM05D000924 ORTHO05D001209 6.3e-15 84.7 91 68.1
Peaxi162Scf00064g01426 Petunia axillaris HOM05D000924 ORTHO05D001209 8.2e-15 84.3 91 54.9
TWI14G0143 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 8.2e-15 84.3 135 48.9
arahy.Tifrunner.gnm1.ann1.1JT8J9 Arachis hypogaea HOM05D000924 ORTHO05D001209 1.1e-14 84.0 103 58.3
arahy.Tifrunner.gnm1.ann1.JY4JA5 Arachis hypogaea HOM05D000924 ORTHO05D001209 1.1e-14 84.0 103 58.3
CSS0008681 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 1.1e-14 84.0 116 54.3
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 1.1e-14 84.0 90 68.9
CSS0036316 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 1.4e-14 83.6 116 54.3
MSTRG.1010 Avicennia marina HOM05D000924 ORTHO05D001209 2.4e-14 82.8 90 67.8
Sed0004818 Sechium edule HOM05D000924 ORTHO05D001209 2.4e-14 82.8 90 67.8
Potri.012G097300 Populus trichocarpa HOM05D000924 ORTHO05D001209 4.1e-14 82.0 94 57.4
ECA246G0163 Erigeron canadensis HOM05D000924 ORTHO05D001209 5.3e-14 81.6 91 60.4
PGR083G1659 Punica granatum HOM05D000924 ORTHO05D001209 5.3e-14 81.6 116 56.9
SGA_v2.0_scaffold161G37860 Striga asiatica HOM05D000924 ORTHO05D001209 7.0e-14 81.3 90 65.6
Cc02_g28440 Coffea canephora HOM05D000924 ORTHO05D001209 9.1e-14 80.9 89 65.2
PSO063G7524 Papaver somniferum HOM05D000924 ORTHO05D001209 9.1e-14 80.9 106 50.0
PGSC0003DMG400030366 Solanum tuberosum HOM05D000924 ORTHO05D001209 1.2e-13 80.5 50 76.0
Sopen06g033490 Solanum pennellii HOM05D000924 ORTHO05D001209 1.6e-13 80.1 50 76.0
DCAR_003081 Daucus carota HOM05D000924 ORTHO05D001209 2.0e-13 79.7 90 66.7
Prupe.6G358100 Prunus persica HOM05D000924 ORTHO05D001209 2.0e-13 79.7 91 65.9
Sc15g0004020 Simmondsia chinensis HOM05D000924 ORTHO05D001209 2.6e-13 79.3 90 65.6
Eucgr.F01825 Eucalyptus grandis HOM05D000924 ORTHO05D001209 3.5e-13 79.0 90 65.6
FAN05G2437 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.5e-13 79.0 93 48.4
Glyma.08G173500 Glycine max HOM05D000924 ORTHO05D001209 3.5e-13 79.0 90 58.9
Lj5A314T76 Lonicera japonica HOM05D000924 ORTHO05D001209 3.5e-13 79.0 103 56.3
VMungo1080G0748 Vigna mungo HOM05D000924 ORTHO05D001209 3.5e-13 79.0 90 62.2
PSO782G5199 Papaver somniferum HOM05D000924 ORTHO05D001209 4.5e-13 78.6 104 58.7
Phvul.005G055300 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 5.9e-13 78.2 90 62.2
TAR369G0929 Trochodendron aralioides HOM05D000924 ORTHO05D001209 5.9e-13 78.2 141 50.4
Gohir.A10G187300 Gossypium hirsutum HOM05D000924 ORTHO05D001209 7.7e-13 77.8 89 65.2
CANSAT80G1721 Cannabis sativa HOM05D000924 ORTHO05D001209 1.0e-12 77.4 104 54.8
Cpa.g.sc36.108 Carica papaya HOM05D000924 ORTHO05D001209 1.0e-12 77.4 104 56.7
AUR62032373 Chenopodium quinoa HOM05D000924 ORTHO05D001209 1.0e-12 77.4 103 60.2
Rhsim06G0001600 Rhododendron simsii HOM05D000924 ORTHO05D001209 1.0e-12 77.4 90 62.2
unitig_26.g9847 Utricularia gibba HOM05D000924 ORTHO05D001209 1.0e-12 77.4 134 43.3
Ciclev10010890m.g Citrus clementina HOM05D000924 ORTHO05D001209 1.3e-12 77.0 92 65.2
SHI31129 Sapria himalayana HOM05D000924 ORTHO05D001209 1.3e-12 77.0 117 52.1
COL.COLO4_20702 Corchorus olitorius HOM05D000924 ORTHO05D001209 1.7e-12 76.6 89 64.0
Gohir.D10G194400 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.7e-12 76.6 89 65.2
Gorai.011G217300 Gossypium raimondii HOM05D000924 ORTHO05D001209 1.7e-12 76.6 89 65.2
Nitab4.5_0000110g0580 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.7e-12 76.6 49 71.4
Aqoxy3G02568 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 2.2e-12 76.3 92 62.0
ClCG05G013070 Citrullus lanatus HOM05D000924 ORTHO05D001209 2.2e-12 76.3 87 50.6
FvH4_6g00860 Fragaria vesca HOM05D000924 ORTHO05D001209 2.2e-12 76.3 92 53.3
FAN14G0455 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.2e-12 76.3 92 53.3
CANSAT78G0159 Cannabis sativa HOM05D000924 ORTHO05D001209 2.9e-12 75.9 86 54.7
MBI15_g36602_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 2.9e-12 75.9 86 66.3
ClCG11G018370 Citrullus lanatus HOM05D000924 ORTHO05D001209 3.8e-12 75.5 87 63.2
COL.COLO4_18725 Corchorus olitorius HOM05D000924 ORTHO05D001209 5.0e-12 75.1 104 56.7
Lj5C314G2 Lonicera japonica HOM05D000924 ORTHO05D001209 6.5e-12 74.7 101 49.5
AL4G40630 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 8.5e-12 74.3 86 50.0
Glyma.15G253800 Glycine max HOM05D000924 ORTHO05D001209 8.5e-12 74.3 90 58.9
BcaC06g34852 Brassica carinata HOM05D000924 ORTHO05D001209 1.1e-11 73.9 90 47.8
A07p15350 Brassica napus HOM05D000924 ORTHO05D001209 1.1e-11 73.9 90 47.8
C07p22650 Brassica napus HOM05D000924 ORTHO05D001209 1.1e-11 73.9 90 47.8
BolC7t42794H Brassica oleracea HOM05D000924 ORTHO05D001209 1.1e-11 73.9 90 47.8
BraA07t29275Z Brassica rapa HOM05D000924 ORTHO05D001209 1.1e-11 73.9 90 47.8
Sabra15G0116500 Salix brachista HOM05D000924 ORTHO05D001209 1.1e-11 73.9 91 57.1
THA.LOC104812019 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 1.5e-11 73.6 91 62.6
Zm00001eb328850 Zea mays HOM05D000924 ORTHO05D001209 1.5e-11 73.6 83 54.2
FAN09G1765 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.5e-11 72.8 93 49.5
MELO3C006732.2 Cucumis melo HOM05D000924 ORTHO05D001209 3.2e-11 72.4 89 62.9
CsaV3_3G015340 Cucumis sativus L. HOM05D000924 ORTHO05D001209 3.2e-11 72.4 89 62.9
Os03g0743800 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D001209 3.2e-11 72.4 86 44.2
Potri.015G095500 Populus trichocarpa HOM05D000924 ORTHO05D001209 3.2e-11 72.4 91 57.1
AT1G20960 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 4.2e-11 72.0 90 58.9
Thhalv10006525m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 4.2e-11 72.0 132 47.0
Duzib128G1905 Durio zibethinus HOM05D000924 ORTHO05D001209 7.2e-11 71.2 89 60.7
Thecc.10G149400 Theobroma cacao HOM05D000924 ORTHO05D001209 7.2e-11 71.2 89 60.7
TPR.G10336 Trifolium pratense HOM05D000924 ORTHO05D001209 7.2e-11 71.2 86 64.0
Nitab4.5_0004801g0020 Nicotiana tabacum HOM05D000924 ORTHO05D001209 9.4e-11 70.9 66 74.2
ClCG05G006710 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.2e-10 70.5 89 61.8
SMO347G0607 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 1.2e-10 70.5 137 40.1
TPR.G25887 Trifolium pratense HOM05D000924 ORTHO05D001209 1.2e-10 70.5 87 60.9
Carub.0001s2043 Capsella rubella HOM05D000924 ORTHO05D001209 1.6e-10 70.1 88 58.0
Oeu060274.1 Olea europaea HOM05D000924 ORTHO05D001209 1.6e-10 70.1 49 71.4
CDE07G1660 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 2.1e-10 69.7 89 59.6
Nitab4.5_0003918g0050 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.1e-10 69.7 90 54.4
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 2.7e-10 69.3 80 45.0
Medtr2g064740 Medicago truncatula HOM05D000924 ORTHO05D001209 2.7e-10 69.3 117 50.4
BcaB03g14290 Brassica carinata HOM05D000924 ORTHO05D001209 3.6e-10 68.9 88 58.0
AT2G42270 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 4.7e-10 68.6 114 40.4
EL10Ac2g02545 Beta vulgaris HOM05D000924 ORTHO05D001209 4.7e-10 68.6 95 51.6
A02p10320 Brassica napus HOM05D000924 ORTHO05D001209 6.1e-10 68.2 89 48.3
BraA02t06099Z Brassica rapa HOM05D000924 ORTHO05D001209 6.1e-10 68.2 89 48.3
AUR62024847 Chenopodium quinoa HOM05D000924 ORTHO05D001209 6.1e-10 68.2 90 43.3
Lj3g0017691 Lotus japonicus HOM05D000924 ORTHO05D001209 6.1e-10 68.2 48 64.6
Migut.N01909 Erythranthe guttata HOM05D000924 ORTHO05D001209 8.0e-10 67.8 88 56.8
Pp3c1_35880 Physcomitrium patens HOM05D000924 ORTHO05D001209 8.0e-10 67.8 88 56.8
BcaC03g14318 Brassica carinata HOM05D000924 ORTHO05D001209 1.0e-09 67.4 89 47.2
CDE06G2318 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 1.0e-09 67.4 102 54.9
Sp1g18660 Schrenkiella parvula HOM05D000924 ORTHO05D001209 1.4e-09 67.0 86 58.1
Ah.01g015930 Amaranthus hybridus HOM05D000924 ORTHO05D001209 1.8e-09 66.6 104 56.7
C02p17050 Brassica napus HOM05D000924 ORTHO05D001209 2.3e-09 66.2 89 47.2
BolC2t07803H Brassica oleracea HOM05D000924 ORTHO05D001209 2.3e-09 66.2 89 47.2
MD09G1063000 Malus domestica HOM05D000924 ORTHO05D001209 2.3e-09 66.2 93 51.6
Ca_03699_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 3.0e-09 65.9 85 62.4
Mapoly0043s0081 Marchantia polymorpha HOM05D000924 ORTHO05D001209 3.0e-09 65.9 119 42.0
CARHR021420 Cardamine hirsuta HOM05D000924 ORTHO05D001209 6.7e-09 64.7 88 53.4
Cc05_g03360 Coffea canephora HOM05D000924 ORTHO05D001209 6.7e-09 64.7 95 48.4
Nitab4.5_0001515g0080 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.2e-08 63.9 83 57.8
Lalb_Chr25g0285181 Lupinus albus HOM05D000924 ORTHO05D001209 2.6e-08 62.8 48 60.4
Solyc06g071620.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 2.6e-08 62.8 160 33.8
AL5G18660 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 3.3e-08 62.4 88 44.3
AUR62024846 Chenopodium quinoa HOM05D000924 ORTHO05D001209 3.3e-08 62.4 166 31.3
Lsat_1_v5_gn_3_7501 Lactuca sativa HOM05D000924 ORTHO05D001209 5.7e-08 61.6 91 58.2
Nitab4.5_0000831g0040 Nicotiana tabacum HOM05D000924 ORTHO05D001209 5.7e-08 61.6 67 74.6
AL1G33990 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 7.5e-08 61.2 85 56.5
Carub.0004s2461 Capsella rubella HOM05D000924 ORTHO05D001209 7.5e-08 61.2 85 48.2
CAN.G993.32 Capsicum annuum HOM05D000924 ORTHO05D001209 7.5e-08 61.2 94 50.0
RcHm_v2.0_Chr3g0448351 Rosa chinensis HOM05D000924 ORTHO05D001209 3.7e-07 58.9 51 58.8
GSVIVG01010769001 Vitis vinifera HOM05D000924 ORTHO05D001209 4.8e-07 58.5 146 34.9
ATR0605G032 Amborella trichopoda HOM05D000924 ORTHO05D001209 8.2e-07 57.8 47 63.8
Aa31LG7G5140 Aethionema arabicum HOM05D000924 ORTHO05D001209 1.4e-06 57.0 135 37.0
CARHR137320 Cardamine hirsuta HOM05D000924 ORTHO05D001209 1.8e-06 56.6 102 40.2
SEGI_01233 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 1.8e-06 56.6 46 65.2
SEGI_03458 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 1.8e-06 56.6 46 65.2
CiPaw.07G131100 Carya illinoinensis HOM05D000924 ORTHO05D001209 5.3e-06 55.1 91 56.0
CBR_g70690 Chara braunii HOM05D000924 ORTHO05D001209 5.3e-06 55.1 141 36.9
BraA08t33566Z Brassica rapa HOM05D000924 ORTHO05D001209 7.0e-06 54.7 88 37.5
C03p28130 Brassica napus HOM05D000924 ORTHO05D001209 9.1e-06 54.3 114 31.6
Nitab4.5_0007467g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 9.1e-06 54.3 49 57.1


User provided reference genes

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