Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000636g0030 Nicotiana tabacum HOM05D000104 ORTHO05D005891 2.7e-104 382.1 203 100.0
Nitab4.5_0001618g0170 Nicotiana tabacum HOM05D000104 ORTHO05D005891 8.3e-90 334.0 221 84.2
CAN.G1237.14 Capsicum annuum HOM05D000104 ORTHO05D005891 5.6e-86 321.2 221 80.1
Peaxi162Scf00130g00834 Petunia axillaris HOM05D000104 ORTHO05D005891 7.3e-86 320.9 221 80.1
Solyc04g016370.3 Solanum lycopersicum HOM05D000104 ORTHO05D005891 1.3e-82 310.1 221 77.8
Sopen04g008460 Solanum pennellii HOM05D000104 ORTHO05D005891 3.7e-82 308.5 221 77.4
TAR369G0997 Trochodendron aralioides HOM05D000104 ORTHO05D005891 1.1e-68 263.8 225 65.3
CsaV3_4G027520 Cucumis sativus L. HOM05D000104 ORTHO05D005891 1.8e-68 263.1 223 67.7
Dinv18670 Davidia involucrata HOM05D000104 ORTHO05D005891 5.2e-68 261.5 225 67.1
TAR369G0737 Trochodendron aralioides HOM05D000104 ORTHO05D005891 5.2e-68 261.5 225 64.9
Cc06_g18110 Coffea canephora HOM05D000104 ORTHO05D005891 6.8e-68 261.2 224 66.1
MELO3C026332.2 Cucumis melo HOM05D000104 ORTHO05D005891 6.8e-68 261.2 223 67.3
Potri.006G047100 Populus trichocarpa HOM05D000104 ORTHO05D005891 6.8e-68 261.2 226 66.4
Nn7g36404 Nelumbo nucifera HOM05D000104 ORTHO05D005891 2.0e-67 259.6 224 65.2
Potri.016G043500 Populus trichocarpa HOM05D000104 ORTHO05D005891 3.4e-67 258.8 225 64.4
Sabra06G0032800 Salix brachista HOM05D000104 ORTHO05D005891 3.4e-67 258.8 234 63.2
Eucgr.A02310 Eucalyptus grandis HOM05D000104 ORTHO05D005891 7.6e-67 257.7 232 62.5
Dinv39659 Davidia involucrata HOM05D000104 ORTHO05D005891 9.9e-67 257.3 225 66.7
Hma1.2p1_0110F.1_g052850 Hydrangea macrophylla HOM05D000104 ORTHO05D005891 9.9e-67 257.3 225 65.3
Hma1.2p1_1997F.1_g310440 Hydrangea macrophylla HOM05D000104 ORTHO05D005891 9.9e-67 257.3 225 65.3
TPR.G19660 Trifolium pratense HOM05D000104 ORTHO05D005891 9.9e-67 257.3 223 64.1
CSS0030896 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D005891 1.3e-66 256.9 225 65.3
Atru.chr1.1229 Acer truncatum HOM05D000104 ORTHO05D005891 3.7e-66 255.4 225 63.1
Medtr7g090960 Medicago truncatula HOM05D000104 ORTHO05D005891 8.4e-66 254.2 222 62.6
Manes.09G018100 Manihot esculenta HOM05D000104 ORTHO05D005891 1.4e-65 253.4 222 64.4
Rhsim03G0029000 Rhododendron simsii HOM05D000104 ORTHO05D005891 1.4e-65 253.4 225 64.0
Lj1C1125T8 Lonicera japonica HOM05D000104 ORTHO05D005891 1.9e-65 253.1 226 65.5
arahy.Tifrunner.gnm1.ann1.EUAM8L Arachis hypogaea HOM05D000104 ORTHO05D005891 4.1e-65 251.9 222 64.4
Ca_12259_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005891 5.4e-65 251.5 222 64.4
Nn2g15125 Nelumbo nucifera HOM05D000104 ORTHO05D005891 2.1e-64 249.6 225 64.4
Glyma.10G106500 Glycine max HOM05D000104 ORTHO05D005891 2.7e-64 249.2 223 63.2
Lj1g0026239 Lotus japonicus HOM05D000104 ORTHO05D005891 3.5e-64 248.8 223 61.4
TPR.G18256 Trifolium pratense HOM05D000104 ORTHO05D005891 3.5e-64 248.8 222 62.6
HanXRQChr10g0292021 Helianthus annuus HOM05D000104 ORTHO05D005891 4.6e-64 248.4 224 63.4
Actinidia39201 Actinidia chinensis HOM05D000104 ORTHO05D005891 7.8e-64 247.7 225 63.1
Actinidia09301 Actinidia chinensis HOM05D000104 ORTHO05D005891 1.7e-63 246.5 225 63.1
Phvul.001G129200 Phaseolus vulgaris HOM05D000104 ORTHO05D005891 3.9e-63 245.4 224 62.5
VMungo1383G1381 Vigna mungo HOM05D000104 ORTHO05D005891 3.9e-63 245.4 223 62.8
Aqoxy5G00045 Aquilegia oxysepala HOM05D000104 ORTHO05D005891 8.6e-63 244.2 224 60.3
Psat6g121600 Pisum sativum HOM05D000104 ORTHO05D005891 8.6e-63 244.2 223 61.4
Glyma.19G136000 Glycine max HOM05D000104 ORTHO05D005891 1.1e-62 243.8 223 62.3
Lalb_Chr25g0287091 Lupinus albus HOM05D000104 ORTHO05D005891 1.1e-62 243.8 223 61.4
Gohir.A09G121000 Gossypium hirsutum HOM05D000104 ORTHO05D005891 1.9e-62 243.0 225 61.8
Gorai.006G135500 Gossypium raimondii HOM05D000104 ORTHO05D005891 1.9e-62 243.0 225 61.8
Psat3g074520 Pisum sativum HOM05D000104 ORTHO05D005891 3.3e-62 242.3 222 61.3
vmacro21967 Vaccinium macrocarpon HOM05D000104 ORTHO05D005891 4.3e-62 241.9 225 60.9
Lalb_Chr01g0017271 Lupinus albus HOM05D000104 ORTHO05D005891 5.6e-62 241.5 223 61.4
Cfa016778 Carpinus fangiana HOM05D000104 ORTHO05D005891 1.2e-61 240.4 222 62.6
Gohir.D09G117100 Gossypium hirsutum HOM05D000104 ORTHO05D005891 1.2e-61 240.4 225 61.3
GSVIVG01033231001 Vitis vinifera HOM05D000104 ORTHO05D005891 2.1e-61 239.6 226 61.1
Migut.K00102 Erythranthe guttata HOM05D000104 ORTHO05D005891 3.6e-61 238.8 221 62.9
Glyma.03G133700 Glycine max HOM05D000104 ORTHO05D005891 6.2e-61 238.0 223 61.9
Prupe.7G053300 Prunus persica HOM05D000104 ORTHO05D005891 8.1e-61 237.7 222 60.8
CDE02G4214 Ceratophyllum demersum HOM05D000104 ORTHO05D005891 1.1e-60 237.3 223 60.5
Ca_08427_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005891 1.1e-60 237.3 222 58.6
MBI13_g30332_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005891 1.1e-60 237.3 231 58.0
Thecc.05G148000 Theobroma cacao HOM05D000104 ORTHO05D005891 1.1e-60 237.3 225 61.3
SGA_v2.0_scaffold94G28495 Striga asiatica HOM05D000104 ORTHO05D005891 1.4e-60 236.9 224 62.5
QL07p003748 Quercus lobata HOM05D000104 ORTHO05D005891 8.9e-60 234.2 242 57.0
TAR623G0750 Trochodendron aralioides HOM05D000104 ORTHO05D005891 8.9e-60 234.2 225 60.9
CiPaw.10G035500 Carya illinoinensis HOM05D000104 ORTHO05D005891 1.5e-59 233.4 223 62.8
MD11G1158800 Malus domestica HOM05D000104 ORTHO05D005891 2.0e-59 233.0 222 59.5
ClCG04G003710 Citrullus lanatus HOM05D000104 ORTHO05D005891 2.6e-59 232.6 238 58.8
CiPaw.09G040400 Carya illinoinensis HOM05D000104 ORTHO05D005891 3.4e-59 232.3 221 61.5
Ciclev10004142m.g Citrus clementina HOM05D000104 ORTHO05D005891 4.4e-59 231.9 225 59.6
DCAR_013037 Daucus carota HOM05D000104 ORTHO05D005891 4.4e-59 231.9 223 62.8
TWI74G1174 Tripterygium wilfordii HOM05D000104 ORTHO05D005891 4.4e-59 231.9 224 61.6
Nitab4.5_0000826g0080 Nicotiana tabacum HOM05D000104 ORTHO05D005891 5.8e-59 231.5 177 77.4
Duzib106G2014 Durio zibethinus HOM05D000104 ORTHO05D005891 9.9e-59 230.7 225 60.0
arahy.Tifrunner.gnm1.ann1.NU01L9 Arachis hypogaea HOM05D000104 ORTHO05D005891 3.8e-58 228.8 232 58.2
arahy.Tifrunner.gnm1.ann1.KD6P16 Arachis hypogaea HOM05D000104 ORTHO05D005891 4.9e-58 228.4 232 57.8
arahy.Tifrunner.gnm1.ann1.JJI54I Arachis hypogaea HOM05D000104 ORTHO05D005891 6.4e-58 228.0 222 60.8
Haze_19790 Corylus avellana HOM05D000104 ORTHO05D005891 1.9e-57 226.5 230 59.1
Lalb_Chr21g0316591 Lupinus albus HOM05D000104 ORTHO05D005891 4.2e-57 225.3 222 57.7
Oeu017927.1 Olea europaea HOM05D000104 ORTHO05D005891 5.4e-57 224.9 225 60.0
HanXRQChr01g0009101 Helianthus annuus HOM05D000104 ORTHO05D005891 7.1e-57 224.6 225 58.2
THA.LOC104801997 Tarenaya hassleriana HOM05D000104 ORTHO05D005891 7.1e-57 224.6 224 56.2
MD03G1136600 Malus domestica HOM05D000104 ORTHO05D005891 3.5e-56 222.2 222 57.2
THA.LOC104817420 Tarenaya hassleriana HOM05D000104 ORTHO05D005891 3.5e-56 222.2 224 56.7
Lsat_1_v5_gn_5_160760 Lactuca sativa HOM05D000104 ORTHO05D005891 2.3e-55 219.5 225 60.0
HPP92_006700 Vanilla planifolia HOM05D000104 ORTHO05D005891 2.3e-55 219.5 227 55.5
ECA248G3812 Erigeron canadensis HOM05D000104 ORTHO05D005891 3.3e-54 215.7 224 56.7
Sed0002389 Sechium edule HOM05D000104 ORTHO05D005891 2.1e-53 213.0 222 57.7
AT3G57300 Arabidopsis thaliana HOM05D000104 ORTHO05D005891 6.2e-53 211.5 224 55.4
Carub.0001s3808 Capsella rubella HOM05D000104 ORTHO05D005891 8.1e-53 211.1 224 54.0
AUR62026097 Chenopodium quinoa HOM05D000104 ORTHO05D005891 4.0e-52 208.8 204 55.9
SalBow1G3151 Salvia bowleyana HOM05D000104 ORTHO05D005891 2.6e-51 206.1 224 56.7
RcHm_v2.0_Chr3g0483871 Rosa chinensis HOM05D000104 ORTHO05D005891 9.9e-51 204.1 222 56.3
PSO339G5863 Papaver somniferum HOM05D000104 ORTHO05D005891 3.8e-50 202.2 225 54.2
Hund19132 Selenicereus undatus HOM05D000104 ORTHO05D005891 4.9e-50 201.8 224 54.9
AL5G38840 Arabidopsis lyrata HOM05D000104 ORTHO05D005891 6.4e-50 201.4 224 53.1
AUR62024511 Chenopodium quinoa HOM05D000104 ORTHO05D005891 6.4e-50 201.4 204 55.4
CARHR167500 Cardamine hirsuta HOM05D000104 ORTHO05D005891 5.4e-49 198.4 224 52.7
PSO384G1272 Papaver somniferum HOM05D000104 ORTHO05D005891 5.4e-49 198.4 225 52.9
A04p03200 Brassica napus HOM05D000104 ORTHO05D005891 7.1e-49 198.0 224 50.4
BraA04t16042Z Brassica rapa HOM05D000104 ORTHO05D005891 7.1e-49 198.0 224 50.4
Sc19g0008530 Simmondsia chinensis HOM05D000104 ORTHO05D005891 9.3e-49 197.6 225 52.4
TWI53G0966 Tripterygium wilfordii HOM05D000104 ORTHO05D005891 9.3e-49 197.6 224 56.2
FvH4_6g24570 Fragaria vesca HOM05D000104 ORTHO05D005891 2.1e-48 196.4 222 55.0
FAN09G4422 Fragaria x ananassa HOM05D000104 ORTHO05D005891 2.1e-48 196.4 222 55.0
FAN14G5411 Fragaria x ananassa HOM05D000104 ORTHO05D005891 2.1e-48 196.4 222 55.0
C08p32710 Brassica napus HOM05D000104 ORTHO05D005891 3.5e-48 195.7 224 50.4
BolC8t50882H Brassica oleracea HOM05D000104 ORTHO05D005891 3.5e-48 195.7 224 50.4
FAN02G4202 Fragaria x ananassa HOM05D000104 ORTHO05D005891 4.6e-48 195.3 221 54.3
Cpa.g.sc182.16 Carica papaya HOM05D000104 ORTHO05D005891 6.0e-48 194.9 215 54.4
MSTRG.10809 Avicennia marina HOM05D000104 ORTHO05D005891 1.0e-47 194.1 224 54.5
BcaC07g40057 Brassica carinata HOM05D000104 ORTHO05D005891 1.3e-47 193.7 224 50.0
A09p50220 Brassica napus HOM05D000104 ORTHO05D005891 5.1e-47 191.8 224 49.6
BraA09t40472Z Brassica rapa HOM05D000104 ORTHO05D005891 5.1e-47 191.8 224 49.6
FAN05G2243 Fragaria x ananassa HOM05D000104 ORTHO05D005891 6.6e-47 191.4 223 54.3
Sed0023310 Sechium edule HOM05D000104 ORTHO05D005891 8.7e-47 191.0 180 61.1
Sp5g05300 Schrenkiella parvula HOM05D000104 ORTHO05D005891 9.6e-46 187.6 224 49.6
EL10Ac3g07138 Beta vulgaris HOM05D000104 ORTHO05D005891 1.6e-45 186.8 223 50.7
Zm00001eb394610 Zea mays HOM05D000104 ORTHO05D005891 2.1e-45 186.4 223 52.0
Haze_19788 Corylus avellana HOM05D000104 ORTHO05D005891 4.8e-45 185.3 213 55.9
Pp3c1_3340 Physcomitrium patens HOM05D000104 ORTHO05D005891 1.8e-44 183.3 220 47.7
Ah.04g151440 Amaranthus hybridus HOM05D002616 ORTHO05D005891 1.2e-43 180.6 224 49.6
Zm00001eb017000 Zea mays HOM05D000104 ORTHO05D005891 2.6e-43 179.5 223 51.6
Aa31LG10G12170 Aethionema arabicum HOM05D000104 ORTHO05D005891 4.5e-43 178.7 224 48.2
ATR0721G053 Amborella trichopoda HOM05D000104 ORTHO05D005891 5.8e-43 178.3 227 48.9
Mapoly0077s0055 Marchantia polymorpha HOM05D000104 ORTHO05D005891 5.5e-41 171.8 224 45.5
PGR004G1210 Punica granatum HOM05D000104 ORTHO05D005891 6.0e-40 168.3 226 47.8
SMO164G0038 Selaginella moellendorffii HOM05D000104 ORTHO05D005891 7.4e-38 161.4 221 41.2
Os03g0352500 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D005891 6.9e-36 154.8 223 48.0
CBR_g24383 Chara braunii HOM05D000104 ORTHO05D005891 2.9e-34 149.4 245 39.6
Pp3c2_32500 Physcomitrium patens HOM05D000104 ORTHO05D005891 3.2e-33 146.0 221 43.0
Pp3c2_32501 Physcomitrium patens HOM05D000104 ORTHO05D005891 3.2e-33 146.0 221 43.0
Thhalv10005740m.g Eutrema salsugineum HOM05D000104 ORTHO05D005891 2.8e-29 132.9 205 42.0
unitig_37.g12706 Utricularia gibba HOM05D000104 ORTHO05D005891 8.2e-29 131.3 195 46.2
SEGI_10397 Sequoiadendron giganteum HOM05D000104 ORTHO05D005891 3.8e-26 122.5 220 39.1
BcaC02g09928 Brassica carinata HOM05D000104 ORTHO05D021072 1.5e-19 100.5 143 46.2
C04p35080 Brassica napus HOM05D000104 ORTHO05D005891 2.0e-19 100.1 181 40.9
BolC4t25064H Brassica oleracea HOM05D000104 ORTHO05D005891 2.0e-19 100.1 181 40.9
PRCOL_00004031 Prasinoderma coloniale HOM05D000104 ORTHO05D005891 2.9e-10 69.7 197 29.9
AagrBONN_evm.TU.Sc2ySwM_117.3197 Anthoceros agrestis HOM05D000104 ORTHO05D005891 5.5e-09 65.5 226 28.3
Cfa024654 Carpinus fangiana HOM05D000104 ORTHO05D005891 5.7e-06 55.5 143 29.4


User provided reference genes

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