Gene: Os03g0352500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os03g0352500
  • Transcript Identifier Os03t0352500-01
  • Gene Type Coding gene
  • Location chr03 : 13236683-13247343 : positive

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os03t0352500-01
  • MSU-ID LOC_Os03g22900.1
  • symbol OsINO80
  • uniprot Q0DRV0

Descriptions

  • Description Chromatin-remodeling factor, Regulation of gibberellin biosynthesis, Plant growth and development
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IBA
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0016444
ISO
PLAZA Integrative Orthologysomatic cell DNA recombination AT3G57300
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G57300
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G57300
GO:1905168
ISO
PLAZA Integrative Orthologypositive regulation of double-strand break repair via homologous recombination AT3G57300
GO:0045739
ISO
PLAZA Integrative Orthologypositive regulation of DNA repair AT3G57300
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006338
IEA
GOA Databasechromatin remodeling
GO:0006338
IEA
InterProchromatin remodeling
GO:0043044
IBA
IEA
GOA DatabaseATP-dependent chromatin remodeling
GO:0043618
IBA
GOA Databaseregulation of transcription from RNA polymerase II promoter in response to stress
GO:0042766
IBA
GOA Databasenucleosome mobilization
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0042393
IBA
GOA Databasehistone binding
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031011
IBA
IEA
GOA DatabaseIno80 complex
GO:0031011
IEA
InterProIno80 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031047 DNA helicase Ino80
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR000330 SNF2, N-terminal
IPR038718 SNF2-like, N-terminal domain superfamily
IPR020838 DBINO domain
Mapman id Description
12.4.3.1 Chromatin organisation.nucleosome remodeling.INO80 chromatin remodeling complex.ATPase component Ino80