Gene: Potri.016G043500

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.016G043500
  • Transcript Identifier Potri.016G043500.1
  • Gene Type Coding gene
  • Location Chr16 : 2744194-2754027 : negative

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.016G043500.v4.1
  • pacid 42809420
  • synonym eugene3.00160371

Descriptions

  • Description K11665 - DNA helicase INO80 [EC:3.6.4.12] (INO80, INOC1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0006338
IEA
InterProchromatin remodeling
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0045739
ISO
PLAZA Integrative Orthologypositive regulation of DNA repair AT3G57300
GO:1905168
ISO
PLAZA Integrative Orthologypositive regulation of double-strand break repair via homologous recombination AT3G57300
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G57300
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT3G57300
GO:0016444
ISO
PLAZA Integrative Orthologysomatic cell DNA recombination AT3G57300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0042393
ISO
PLAZA Integrative Orthologyhistone binding AT3G57300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0031011
IEA
InterProIno80 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR031047 DNA helicase Ino80
IPR020838 DBINO domain
IPR000330 SNF2, N-terminal
IPR038718 SNF2-like, N-terminal domain superfamily
Mapman id Description
12.4.3.1 Chromatin organisation.nucleosome remodeling.INO80 chromatin remodeling complex.ATPase component Ino80