Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000571g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 8.1e-113 410.6 235 100.0
Nitab4.5_0001364g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 1.0e-107 393.7 232 96.6
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 9.3e-93 344.0 236 78.4
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 2.6e-79 299.3 206 73.8
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 7.6e-79 297.7 212 72.2
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 5.5e-77 291.6 194 76.8
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 2.2e-70 269.6 237 62.9
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 2.9e-70 269.2 237 63.7
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 3.8e-70 268.9 249 59.0
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 7.2e-69 264.6 237 62.0
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 6.1e-68 261.5 238 61.3
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 5.1e-67 258.5 223 62.8
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.2e-65 253.1 237 59.1
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 2.8e-65 252.7 193 69.4
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.8e-65 252.7 237 59.1
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.8e-65 251.9 237 58.6
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 6.3e-65 251.5 237 58.6
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 6.3e-65 251.5 237 57.0
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 1.1e-64 250.8 223 57.8
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.1e-64 250.8 237 58.6
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.1e-64 250.8 237 58.6
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 3.1e-64 249.2 237 57.4
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 4.1e-64 248.8 238 58.0
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 5.3e-64 248.4 229 61.1
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.2e-63 247.3 237 59.1
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 3.4e-63 245.7 237 57.4
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 3.4e-63 245.7 237 58.2
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.3e-62 243.8 235 67.7
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 1.7e-62 243.4 238 56.7
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 2.9e-62 242.7 235 67.7
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 2.9e-62 242.7 238 62.2
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 3.8e-62 242.3 237 56.5
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 3.8e-62 242.3 237 57.4
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 1.1e-61 240.7 235 67.2
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 2.5e-61 239.6 224 56.2
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 3.2e-61 239.2 237 56.5
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 5.5e-61 238.4 236 63.6
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 5.5e-61 238.4 233 56.7
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 9.4e-61 237.7 239 54.8
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 1.6e-60 236.9 237 55.7
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 6.7e-59 231.5 234 53.8
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 2.0e-58 229.9 233 53.2
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 4.3e-58 228.8 232 62.9
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 1.7e-57 226.9 192 63.0
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 3.7e-57 225.7 244 53.3
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.8e-56 223.4 244 50.4
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 2.4e-56 223.0 244 52.5
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 4.1e-56 222.2 234 53.4
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 5.3e-56 221.9 238 51.3
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 9.1e-56 221.1 238 53.4
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 1.2e-55 220.7 237 49.8
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 1.0e-54 217.6 237 55.3
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 1.7e-54 216.9 237 56.5
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 1.7e-54 216.9 237 56.5
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 2.2e-54 216.5 231 53.7
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 2.2e-54 216.5 247 53.8
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 5.0e-54 215.3 230 56.5
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 5.0e-54 215.3 237 54.4
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 5.0e-54 215.3 261 48.3
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 6.5e-54 214.9 237 55.7
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 6.5e-54 214.9 237 55.7
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 6.5e-54 214.9 243 51.9
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 8.5e-54 214.5 234 59.8
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 1.1e-53 214.2 237 55.7
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 1.9e-53 213.4 237 55.7
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 1.9e-53 213.4 238 51.3
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 2.5e-53 213.0 239 51.9
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 3.2e-53 212.6 241 51.9
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 4.2e-53 212.2 244 53.3
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 2.1e-52 209.9 237 54.4
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 2.7e-52 209.5 238 48.7
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 3.6e-52 209.1 237 54.0
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 4.7e-52 208.8 181 70.2
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 4.7e-52 208.8 235 60.0
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 6.1e-52 208.4 237 54.4
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 1.0e-51 207.6 181 58.0
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 2.3e-51 206.5 237 53.6
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 6.7e-51 204.9 240 50.8
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 8.8e-51 204.5 241 51.9
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 1.5e-50 203.8 177 59.9
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 3.3e-50 202.6 237 53.6
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 7.4e-50 201.4 237 59.1
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 7.4e-50 201.4 238 49.2
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 4.8e-49 198.7 237 53.6
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 6.3e-49 198.4 218 53.2
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 8.2e-49 198.0 242 49.6
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 9.1e-48 194.5 180 59.4
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 2.2e-46 189.9 228 48.2
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 5.0e-46 188.7 247 45.7
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 1.1e-45 187.6 231 47.2
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 5.5e-45 185.3 248 45.2
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 1.2e-44 184.1 247 43.7
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 1.3e-41 174.1 250 50.4
Hund30424 Selenicereus undatus HOM05D003161 ORTHO05D015567 1.2e-39 167.5 116 68.1
Hund18985 Selenicereus undatus HOM05D003161 ORTHO05D015567 1.7e-38 163.7 135 59.3
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 2.9e-38 162.9 122 64.8
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 1.5e-34 150.6 105 74.3
Cpa.g.sc85.24 Carica papaya HOM05D003161 ORTHO05D015567 3.4e-34 149.4 107 68.2
MD14G1050300 Malus domestica HOM05D003161 ORTHO05D005173 5.4e-32 142.1 109 65.1
SEGI_29966 Sequoiadendron giganteum HOM05D003161 ORTHO05D015567 7.0e-32 141.7 235 39.1
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 1.6e-31 140.6 108 70.4
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 4.5e-31 139.0 134 57.5
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 4.1e-24 115.9 110 54.5
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 7.0e-24 115.2 267 32.2
TWI74G0321 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.2e-23 114.4 147 48.3
TWI74G1605 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 4.5e-23 112.5 105 54.3
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 1.5e-21 107.5 217 37.3
Dinv25019 Davidia involucrata HOM05D003161 ORTHO05D015567 6.1e-20 102.1 58 84.5
SHI30032 Sapria himalayana HOM05D003161 ORTHO05D015567 1.0e-19 101.3 102 52.9
Cpa.g.sc85.25 Carica papaya HOM05D003161 ORTHO05D119738 1.3e-17 94.4 140 51.4
SEGI_32968 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 1.1e-16 91.3 125 41.6
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 1.0e-14 84.7 206 29.1
PSO384G3517 Papaver somniferum HOM05D003161 ORTHO05D005173 4.3e-13 79.3 103 47.6
Hund18981 Selenicereus undatus HOM05D003161 ORTHO05D015567 2.3e-11 73.6 96 44.8
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 3.4e-10 69.7 56 60.7
Cre10.g428750 Chlamydomonas reinhardtii HOM05D003161 ORTHO05D005173 9.2e-08 61.6 159 32.1
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.6e-07 60.8 60 50.0
CBR_g22381 Chara braunii HOM05D003161 ORTHO05D005173 2.0e-07 60.5 141 29.1
Aqoxy2G00460 Aquilegia oxysepala HOM05D005887 ORTHO05D007694 1.3e-06 57.8 32 78.1


User provided reference genes

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