Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000402g0140 Nicotiana tabacum HOM05D005334 ORTHO05D006560 1.1e-204 716.5 362 100.0
CAN.G1813.2 Capsicum annuum HOM05D005334 ORTHO05D006560 5.8e-195 684.1 362 93.4
Sopen11g005690 Solanum pennellii HOM05D005334 ORTHO05D006560 5.8e-195 684.1 362 93.6
Peaxi162Scf00085g00115 Petunia axillaris HOM05D005334 ORTHO05D006560 2.9e-194 681.8 362 93.6
Solyc11g010950.2 Solanum lycopersicum HOM05D005334 ORTHO05D006560 1.4e-193 679.5 362 93.6
PGSC0003DMG400016186 Solanum tuberosum HOM05D005334 ORTHO05D006560 3.2e-193 678.3 362 93.4
Hma1.2p1_0964F.1_g242010 Hydrangea macrophylla HOM05D005334 ORTHO05D006560 4.1e-156 555.1 380 72.9
Thecc.10G018300 Theobroma cacao HOM05D005334 ORTHO05D006560 5.0e-154 548.1 364 75.3
SGA_v2.0_scaffold45G17221 Striga asiatica HOM05D005334 ORTHO05D006560 2.5e-153 545.8 363 74.7
Gohir.D12G076300 Gossypium hirsutum HOM05D005334 ORTHO05D006560 1.4e-151 540.0 362 73.2
Actinidia05483 Actinidia chinensis HOM05D005334 ORTHO05D006560 3.0e-151 538.9 364 72.8
Rhsim04G0113300 Rhododendron simsii HOM05D005334 ORTHO05D006560 1.5e-150 536.6 364 72.8
vmacro09003 Vaccinium macrocarpon HOM05D005334 ORTHO05D006560 2.0e-150 536.2 364 73.1
Cfa006855 Carpinus fangiana HOM05D005334 ORTHO05D006560 2.6e-150 535.8 364 71.7
Cc07_g13790 Coffea canephora HOM05D005334 ORTHO05D006560 2.6e-150 535.8 363 71.9
Potri.010G189500 Populus trichocarpa HOM05D005334 ORTHO05D006560 4.4e-150 535.0 364 70.9
CANSAT01G0836 Cannabis sativa HOM05D005334 ORTHO05D006560 1.7e-149 533.1 364 72.0
Prupe.1G076500 Prunus persica HOM05D005334 ORTHO05D006560 2.2e-149 532.7 363 71.9
Gorai.008G084700 Gossypium raimondii HOM05D005334 ORTHO05D006560 2.8e-149 532.3 362 72.7
Sed0026061 Sechium edule HOM05D005334 ORTHO05D006560 4.8e-149 531.6 366 72.1
Eucgr.A00094 Eucalyptus grandis HOM05D005334 ORTHO05D006560 8.2e-149 530.8 364 72.8
Ciclev10008278m.g Citrus clementina HOM05D005334 ORTHO05D006560 2.4e-148 529.3 364 71.4
CsaV3_6G044840 Cucumis sativus L. HOM05D005334 ORTHO05D006560 4.1e-148 528.5 363 71.3
SalBow5G4670 Salvia bowleyana HOM05D005334 ORTHO05D006560 9.1e-148 527.3 359 72.7
ClCG01G018260 Citrullus lanatus HOM05D005334 ORTHO05D006560 1.6e-147 526.6 362 70.4
Duzib128G0185 Durio zibethinus HOM05D005334 ORTHO05D006560 1.6e-147 526.6 374 71.4
MSTRG.3723 Avicennia marina HOM05D005334 ORTHO05D006560 3.5e-147 525.4 364 72.3
TWI34G1275 Tripterygium wilfordii HOM05D005334 ORTHO05D006560 3.5e-147 525.4 363 71.3
FAN26G1496 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.5e-147 525.0 363 71.6
Sabra10G0146100 Salix brachista HOM05D005334 ORTHO05D006560 4.5e-147 525.0 385 67.3
SalBow5G3116 Salvia bowleyana HOM05D005334 ORTHO05D006560 5.9e-147 524.6 359 72.4
FvH4_7g07230 Fragaria vesca HOM05D005334 ORTHO05D006560 7.7e-147 524.2 363 71.9
Haze_03908 Corylus avellana HOM05D005334 ORTHO05D006560 1.3e-146 523.5 357 71.4
RcHm_v2.0_Chr6g0270401 Rosa chinensis HOM05D005334 ORTHO05D006560 1.3e-146 523.5 363 71.6
MD01G1042400 Malus domestica HOM05D005334 ORTHO05D006560 1.7e-146 523.1 362 69.3
MELO3C007703.2 Cucumis melo HOM05D005334 ORTHO05D006560 3.8e-146 521.9 367 70.6
RcHm_v2.0_Chr6g0270301 Rosa chinensis HOM05D005334 ORTHO05D006560 5.0e-146 521.5 363 71.6
GSVIVG01003946001 Vitis vinifera HOM05D005334 ORTHO05D006560 1.1e-145 520.4 362 71.3
Medtr8g007340 Medicago truncatula HOM05D005334 ORTHO05D006560 5.5e-145 518.1 364 70.9
FAN23G0357 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.2e-145 517.7 363 71.1
FAN23G0783 Fragaria x ananassa HOM05D005334 ORTHO05D006560 7.2e-145 517.7 363 71.1
QL06p036434 Quercus lobata HOM05D005334 ORTHO05D006560 9.4e-145 517.3 363 69.7
ECA233G4415 Erigeron canadensis HOM05D005334 ORTHO05D006560 3.6e-144 515.4 362 71.5
Manes.10G013400 Manihot esculenta HOM05D005334 ORTHO05D006560 3.6e-144 515.4 364 70.9
Lj3g0001207 Lotus japonicus HOM05D005334 ORTHO05D006560 8.0e-144 514.2 364 70.3
Ciclev10008715m.g Citrus clementina HOM05D005334 ORTHO05D006560 1.4e-143 513.5 367 70.0
FvH4_1g19290 Fragaria vesca HOM05D005334 ORTHO05D006560 1.4e-143 513.5 363 70.5
Ca_14799_v3 Cicer arietinum L. HOM05D005334 ORTHO05D006560 1.8e-143 513.1 365 70.4
Glyma.13G008300 Glycine max HOM05D005334 ORTHO05D006560 3.0e-143 512.3 365 71.5
CiPaw.07G045200 Carya illinoinensis HOM05D005334 ORTHO05D006560 8.8e-143 510.8 366 69.9
arahy.Tifrunner.gnm1.ann1.DY9T0P Arachis hypogaea HOM05D005334 ORTHO05D006560 5.7e-142 508.1 364 69.5
TAR625G0036 Trochodendron aralioides HOM05D005334 ORTHO05D006560 7.5e-142 507.7 363 70.2
VMungo0331G1245 Vigna mungo HOM05D005334 ORTHO05D006560 1.7e-141 506.5 364 69.8
arahy.Tifrunner.gnm1.ann1.D5QNLH Arachis hypogaea HOM05D005334 ORTHO05D006560 2.2e-141 506.1 364 69.2
Sc03g0000510 Simmondsia chinensis HOM05D005334 ORTHO05D006560 2.2e-141 506.1 364 70.3
Nn5g29815 Nelumbo nucifera HOM05D005334 ORTHO05D006560 8.3e-141 504.2 364 70.9
Psat4g223080 Pisum sativum HOM05D005334 ORTHO05D006560 8.3e-141 504.2 365 69.0
Phvul.010G046100 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 1.4e-140 503.4 364 69.5
Phvul.010G045900 Phaseolus vulgaris HOM05D005334 ORTHO05D006560 2.4e-140 502.7 364 69.8
Lalb_Chr12g0210501 Lupinus albus HOM05D005334 ORTHO05D006560 9.1e-140 500.7 364 69.0
CiPaw.07G045000 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.7e-139 499.2 366 68.9
PSO832G1169 Papaver somniferum HOM05D005334 ORTHO05D006560 2.7e-139 499.2 362 68.2
PSO700G0130 Papaver somniferum HOM05D005334 ORTHO05D006560 5.9e-139 498.0 363 66.9
HanXRQChr08g0226671 Helianthus annuus HOM05D005334 ORTHO05D006560 1.3e-138 496.9 363 68.0
CSS0002721 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 7.2e-137 491.1 337 70.9
Migut.K00814 Erythranthe guttata HOM05D005334 ORTHO05D006560 7.2e-137 491.1 363 69.7
Aqoxy6G01573 Aquilegia oxysepala HOM05D005334 ORTHO05D006560 2.1e-136 489.6 356 69.9
PSO761G0425 Papaver somniferum HOM05D005334 ORTHO05D006560 2.1e-136 489.6 364 66.8
AUR62003692 Chenopodium quinoa HOM05D005334 ORTHO05D006560 6.1e-136 488.0 372 66.4
COL.COLO4_25710 Corchorus olitorius HOM05D005334 ORTHO05D006560 8.8e-135 484.2 307 75.6
AUR62018003 Chenopodium quinoa HOM05D005334 ORTHO05D006560 2.6e-134 482.6 391 62.9
PGR031G2068 Punica granatum HOM05D005334 ORTHO05D006560 7.5e-134 481.1 369 66.1
Thhalv10021017m.g Eutrema salsugineum HOM05D005334 ORTHO05D006560 2.9e-130 469.2 362 64.9
CARHR085780 Cardamine hirsuta HOM05D005334 ORTHO05D006560 8.6e-130 467.6 362 65.2
Sp3g09500 Schrenkiella parvula HOM05D005334 ORTHO05D006560 1.5e-129 466.8 362 64.6
Lj2C525G9 Lonicera japonica HOM05D005334 ORTHO05D006560 2.5e-129 466.1 365 67.1
Carub.0003s1053 Capsella rubella HOM05D005334 ORTHO05D006560 4.3e-129 465.3 359 66.0
BcaC05g29390 Brassica carinata HOM05D005334 ORTHO05D006560 3.6e-128 462.2 363 64.7
THA.LOC104816551 Tarenaya hassleriana HOM05D005334 ORTHO05D006560 2.3e-127 459.5 362 64.1
A05p38080 Brassica napus HOM05D005334 ORTHO05D006560 4.0e-127 458.8 364 64.8
C05p56870 Brassica napus HOM05D005334 ORTHO05D006560 8.9e-127 457.6 364 64.6
AT3G11220 Arabidopsis thaliana HOM05D005334 ORTHO05D006560 1.5e-126 456.8 354 65.3
Cpa.g.sc19.179 Carica papaya HOM05D005334 ORTHO05D006560 2.0e-126 456.4 364 65.9
BraA05t22600Z Brassica rapa HOM05D005334 ORTHO05D006560 3.4e-126 455.7 364 64.3
CiPaw.07G049700 Carya illinoinensis HOM05D005334 ORTHO05D006560 4.4e-126 455.3 363 64.5
FAN19G2596 Fragaria x ananassa HOM05D005334 ORTHO05D006560 4.4e-126 455.3 363 65.6
Aa31LG3G4530 Aethionema arabicum HOM05D005334 ORTHO05D006560 2.9e-125 452.6 362 63.0
AL3G22740 Arabidopsis lyrata HOM05D005334 ORTHO05D006560 3.2e-124 449.1 370 63.8
BolC5t34351H Brassica oleracea HOM05D005334 ORTHO05D006560 5.4e-124 448.4 389 60.4
unitig_0.g2648 Utricularia gibba HOM05D005334 ORTHO05D006560 4.6e-123 445.3 377 62.3
PSO013G0112 Papaver somniferum HOM05D005334 ORTHO05D006560 1.3e-122 443.7 318 68.2
CiPaw.07G044700 Carya illinoinensis HOM05D005334 ORTHO05D006560 1.7e-122 443.4 366 62.6
Atru.chr12.1050 Acer truncatum HOM05D005334 ORTHO05D006560 1.2e-120 437.2 333 67.3
Os06g0639600 Oryza sativa ssp. japonica HOM05D005334 ORTHO05D006560 1.8e-119 433.3 366 60.4
Lsat_1_v5_gn_6_15620 Lactuca sativa HOM05D005334 ORTHO05D006560 3.5e-115 419.1 364 62.9
Zm00001eb387250 Zea mays HOM05D005334 ORTHO05D006560 1.0e-114 417.5 367 59.1
Ah.02g123390 Amaranthus hybridus HOM05D005334 ORTHO05D006560 6.6e-114 414.8 361 59.6
Glyma.03G108600 Glycine max HOM05D005334 ORTHO05D006560 8.6e-114 414.5 302 68.2
CDE04G2384 Ceratophyllum demersum HOM05D005334 ORTHO05D006560 1.6e-112 410.2 362 59.4
Dinv36960 Davidia involucrata HOM05D005334 ORTHO05D006560 2.1e-112 409.8 277 72.2
Hund14075 Selenicereus undatus HOM05D005334 ORTHO05D006560 5.2e-111 405.2 361 59.6
SHI03443 Sapria himalayana HOM05D005334 ORTHO05D006560 3.7e-109 399.1 356 58.7
MBI10_g34777_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 4.9e-109 398.7 340 61.2
SEGI_17743 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 4.3e-105 385.6 384 50.5
FAN03G2380 Fragaria x ananassa HOM05D005334 ORTHO05D006560 5.2e-103 378.6 377 56.8
ATR1153G009 Amborella trichopoda HOM05D005334 ORTHO05D006560 5.6e-97 358.6 308 57.1
Gohir.A12G078265 Gossypium hirsutum HOM05D005334 ORTHO05D006560 5.6e-97 358.6 243 71.6
Mapoly0006s0234 Marchantia polymorpha HOM05D005334 ORTHO05D006560 1.5e-86 323.9 385 45.7
Pp3c9_23940 Physcomitrium patens HOM05D005334 ORTHO05D006560 2.0e-86 323.6 372 46.5
AagrBONN_evm.TU.Sc2ySwM_117.1770 Anthoceros agrestis HOM05D005334 ORTHO05D006560 3.1e-79 299.7 414 42.8
Thecc.09G278800 Theobroma cacao HOM05D005334 ORTHO05D006560 3.8e-77 292.7 277 55.6
Dinv27014 Davidia involucrata HOM05D005334 ORTHO05D006560 7.1e-76 288.5 215 66.0
Prupe.6G206700 Prunus persica HOM05D005334 ORTHO05D006560 3.1e-71 273.1 364 47.3
DCAR_003438 Daucus carota HOM05D005334 ORTHO05D006560 1.2e-67 261.2 356 46.6
TPR.G11130 Trifolium pratense HOM05D005334 ORTHO05D006560 2.7e-67 260.0 196 65.8
TPR.G5292 Trifolium pratense HOM05D005334 ORTHO05D006560 1.8e-66 257.3 169 74.6
Lj6g0009802 Lotus japonicus HOM05D005334 ORTHO05D006560 5.7e-65 252.3 198 65.2
Lj2g0000099 Lotus japonicus HOM05D005334 ORTHO05D006560 1.6e-64 250.8 169 71.6
Lsat_1_v5_gn_4_105120 Lactuca sativa HOM05D005334 ORTHO05D006560 6.3e-64 248.8 213 62.0
BcaB06g25638 Brassica carinata HOM05D005334 ORTHO05D006560 3.3e-57 226.5 168 68.5
Lsat_1_v5_gn_8_12861 Lactuca sativa HOM05D005334 ORTHO05D006560 1.2e-54 218.0 161 68.9
CSS0046374 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.6e-51 206.5 122 82.8
CSS0016906 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 8.8e-50 201.8 122 81.1
Lsat_1_v5_gn_5_29040 Lactuca sativa HOM05D005334 ORTHO05D006560 2.5e-44 183.7 200 52.0
CiPaw.07G044400 Carya illinoinensis HOM05D005334 ORTHO05D006560 2.1e-43 180.6 137 68.6
RcHm_v2.0_Chr2g0110581 Rosa chinensis HOM05D005334 ORTHO05D006560 2.3e-42 177.2 307 37.5
SMO146G0066 Selaginella moellendorffii HOM05D005334 ORTHO05D006560 8.8e-42 175.3 253 41.5
MD01G1042700 Malus domestica HOM05D005334 ORTHO05D006560 1.1e-41 174.9 165 54.5
Lsat_1_v5_gn_4_67481 Lactuca sativa HOM05D005334 ORTHO05D006560 6.3e-40 169.1 136 65.4
CSS0017464 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 1.4e-39 167.9 122 71.3
ATR0022G031 Amborella trichopoda HOM05D005334 ORTHO05D006560 2.9e-37 160.2 141 61.0
SEGI_40300 Sequoiadendron giganteum HOM05D005334 ORTHO05D006560 5.7e-33 146.0 199 39.2
Lsat_1_v5_gn_1_79261 Lactuca sativa HOM05D005334 ORTHO05D006560 6.3e-32 142.5 136 57.4
HPP92_008022 Vanilla planifolia HOM05D005334 ORTHO05D006560 8.0e-27 125.6 114 56.1
CSS0026696 Camellia sinensis var. sinensis HOM05D005334 ORTHO05D006560 3.0e-26 123.6 72 80.6
MBI03_g45376_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.5e-25 121.3 84 70.2
HPP92_008021 Vanilla planifolia HOM05D005334 ORTHO05D006560 3.1e-23 113.6 72 81.9
Cre03.g196000 Chlamydomonas reinhardtii HOM05D005334 ORTHO05D006560 3.6e-19 100.1 383 22.2
MBI03_g46739_MAGBIO Magnolia biondii HOM05D005334 ORTHO05D006560 1.0e-18 98.6 77 61.0
CBR_g30786 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-14 85.1 133 33.8


User provided reference genes

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