Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000350g0310 Nicotiana tabacum HOM05D000964 ORTHO05D004047 1.4e-72 276.2 136 100.0
CAN.G327.18 Capsicum annuum HOM05D000964 ORTHO05D004047 8.8e-19 97.4 57 78.9
CAN.G1478.7 Capsicum annuum HOM05D000964 ORTHO05D004047 1.5e-18 96.7 57 80.7
CAN.G1595.4 Capsicum annuum HOM05D000964 ORTHO05D004047 1.5e-18 96.7 57 80.7
Nitab4.5_0002882g0040 Nicotiana tabacum HOM05D000964 ORTHO05D004047 1.9e-18 96.3 57 80.7
PGSC0003DMG400002472 Solanum tuberosum HOM05D000964 ORTHO05D004047 3.3e-18 95.5 57 80.7
PGSC0003DMG400003335 Solanum tuberosum HOM05D000964 ORTHO05D004047 3.3e-18 95.5 57 80.7
PGSC0003DMG400014075 Solanum tuberosum HOM05D000964 ORTHO05D004047 3.3e-18 95.5 57 80.7
Lsat_1_v5_gn_5_50401 Lactuca sativa HOM05D000964 ORTHO05D004047 3.1e-16 89.0 69 68.1
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 4.1e-16 88.6 53 79.2
HanXRQChr00c0394g0574561 Helianthus annuus HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
HanXRQChr01g0020241 Helianthus annuus HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
HanXRQChr04g0127511 Helianthus annuus HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
HanXRQChr10g0284361 Helianthus annuus HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
HanXRQChr10g0318081 Helianthus annuus HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
HanXRQChr11g0326941 Helianthus annuus HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
HanXRQCPg0580161 Helianthus annuus HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
Lsat_1_v5_gn_7_96560 Lactuca sativa HOM05D000964 ORTHO05D004047 2.6e-15 85.9 57 73.7
CSS0021839 Camellia sinensis var. sinensis HOM05D000964 ORTHO05D004047 5.9e-15 84.7 57 71.9
HanXRQChr10g0303881 Helianthus annuus HOM05D000964 ORTHO05D004047 1.0e-14 84.0 57 71.9
PSO548G0113 Papaver somniferum HOM05D000964 ORTHO05D004047 8.5e-14 80.9 57 70.2
Migut.D01434 Erythranthe guttata HOM05D000964 ORTHO05D004047 1.4e-13 80.1 53 71.7
DCAR_032517 Daucus carota HOM05D000964 ORTHO05D004047 3.2e-13 79.0 56 69.6
HanXRQChr11g0321071 Helianthus annuus HOM05D000964 ORTHO05D004047 1.4e-11 73.6 48 72.9
Oeu058362.1 Olea europaea HOM05D000964 ORTHO05D004047 1.4e-11 73.6 53 67.9
EL10Ac5g11667 Beta vulgaris HOM05D000964 ORTHO05D004047 2.3e-11 72.8 52 65.4
Gohir.1Z050334 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.9e-11 72.0 48 72.9
Gohir.A12G025100 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.9e-11 72.0 48 72.9
Gohir.A12G228525 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.9e-11 72.0 48 72.9
Gohir.D08G194628 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.9e-11 72.0 48 72.9
Medtr0002s0760 Medicago truncatula HOM05D000964 ORTHO05D004047 8.8e-11 70.9 60 58.3
Gorai.004G150700 Gossypium raimondii HOM05D000964 ORTHO05D003870 1.5e-10 70.1 48 70.8
Gohir.D01G102099 Gossypium hirsutum HOM05D000964 ORTHO05D004047 4.4e-10 68.6 48 70.8
AL2G20580 Arabidopsis lyrata HOM05D000964 ORTHO05D004047 5.7e-10 68.2 48 68.8
AL2G21700 Arabidopsis lyrata HOM05D000964 ORTHO05D004047 5.7e-10 68.2 48 68.8
ATCG00740 Arabidopsis thaliana HOM05D000964 ORTHO05D004047 5.7e-10 68.2 48 68.8
CARHR282230 Cardamine hirsuta HOM05D000964 ORTHO05D004047 5.7e-10 68.2 48 68.8
Gohir.D08G145550 Gossypium hirsutum HOM05D000964 ORTHO05D003870 5.7e-10 68.2 48 68.8
LjContig00318g0022290 Lotus japonicus HOM05D000964 ORTHO05D004047 9.7e-10 67.4 47 68.1
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 9.7e-10 67.4 47 68.1
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 9.7e-10 67.4 47 68.1
C02p60150 Brassica napus HOM05D000964 ORTHO05D004047 1.3e-09 67.0 48 66.7
BolSC46t61018H Brassica oleracea HOM05D000964 ORTHO05D004047 1.3e-09 67.0 48 66.7
BraSC143t45635Z Brassica rapa HOM05D000964 ORTHO05D004047 1.3e-09 67.0 48 66.7
MSTRG.11748 Avicennia marina HOM05D000964 ORTHO05D004047 1.7e-09 66.6 46 67.4
RcHm_v2.0_CPg0501901 Rosa chinensis HOM05D000964 ORTHO05D004047 1.7e-09 66.6 48 62.5
Sed0000903 Sechium edule HOM05D000964 ORTHO05D004047 2.2e-09 66.2 47 66.0
SGA_v2.0_scaffold95G28822 Striga asiatica HOM05D000964 ORTHO05D004047 2.2e-09 66.2 53 60.4
Gohir.A01G137773 Gossypium hirsutum HOM05D000964 ORTHO05D004047 3.7e-09 65.5 48 66.7
Medtr4g051380 Medicago truncatula HOM05D000964 ORTHO05D004047 3.7e-09 65.5 49 69.4
PGR111G0002 Punica granatum HOM05D000964 ORTHO05D004047 8.2e-09 64.3 47 68.1
CARHR287430 Cardamine hirsuta HOM05D000964 ORTHO05D004047 1.1e-08 63.9 47 66.0
arahy.Tifrunner.gnm1.ann1.93R6SD Arachis hypogaea HOM05D000964 ORTHO05D004047 1.8e-08 63.2 47 63.8
arahy.Tifrunner.gnm1.ann1.918II3 Arachis hypogaea HOM05D000964 ORTHO05D004047 2.4e-08 62.8 47 66.0
HanXRQChr00c0593g0576341 Helianthus annuus HOM05D000964 ORTHO05D004047 3.1e-08 62.4 40 72.5
Hund08596 Selenicereus undatus HOM05D000964 ORTHO05D004047 4.1e-08 62.0 52 63.5
Lalb_Chr25g0283351 Lupinus albus HOM05D000964 ORTHO05D004047 5.3e-08 61.6 44 68.2
Lalb_Chr03g0039311 Lupinus albus HOM05D000964 ORTHO05D004047 2.0e-07 59.7 43 67.4
TWI75G0222 Tripterygium wilfordii HOM05D000964 ORTHO05D004047 3.4e-07 58.9 52 63.5
HPP92_028393 Vanilla planifolia HOM05D000964 ORTHO05D004047 3.4e-07 58.9 56 55.4
HPP92_028402 Vanilla planifolia HOM05D000964 ORTHO05D004047 3.4e-07 58.9 56 55.4
HPP92_028410 Vanilla planifolia HOM05D000964 ORTHO05D004047 3.4e-07 58.9 56 55.4
Duzib165G0005 Durio zibethinus HOM05D000964 ORTHO05D004047 1.7e-06 56.6 37 75.7


User provided reference genes

Program Settings