Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.7e-253 878.2 459 100.0
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.3e-219 765.0 416 96.6
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.8e-216 754.2 435 92.2
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 5.4e-145 518.5 436 65.6
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 1.2e-139 500.7 442 63.1
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 6.4e-130 468.4 447 60.0
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 5.1e-95 352.4 442 48.9
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.1e-87 325.9 442 45.2
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 1.4e-84 317.8 441 44.4
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 1.4e-84 317.8 439 44.4
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 6.9e-84 315.5 457 43.1
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 3.4e-83 313.2 437 44.6
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 3.2e-81 306.6 439 44.4
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 3.2e-81 306.6 439 44.0
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 5.1e-79 299.3 478 41.8
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 6.7e-79 298.9 441 44.4
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 6.7e-79 298.9 439 43.3
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 8.7e-79 298.5 440 43.6
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 1.9e-78 297.4 443 43.8
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 9.7e-78 295.0 439 43.3
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.8e-76 290.8 442 43.0
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 3.1e-76 290.0 440 42.3
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 4.1e-76 289.7 440 42.7
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 3.4e-75 286.6 446 42.4
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 1.3e-74 284.6 439 43.5
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 2.2e-74 283.9 441 42.4
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 2.2e-74 283.9 443 41.3
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 2.2e-74 283.9 437 42.6
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 6.5e-74 282.3 436 41.1
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.1e-73 281.6 441 42.0
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 3.2e-73 280.0 454 39.6
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.2e-73 279.6 155 92.9
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 4.2e-73 279.6 464 41.4
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 5.5e-73 279.3 440 39.3
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.6e-72 277.7 440 41.1
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 1.6e-72 277.7 440 40.2
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 1.6e-72 277.7 451 40.8
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 1.6e-72 277.7 424 42.0
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 1.6e-72 277.7 442 41.0
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.7e-72 276.9 438 40.9
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 2.7e-72 276.9 445 41.8
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 4.6e-72 276.2 439 40.5
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 6.1e-72 275.8 450 40.4
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 6.1e-72 275.8 445 41.3
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 3.0e-71 273.5 447 39.8
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 6.7e-71 272.3 438 41.8
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.1e-70 271.6 449 40.1
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 2.5e-70 270.4 441 40.8
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 3.3e-70 270.0 442 40.3
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 9.7e-70 268.5 453 39.7
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 2.8e-69 266.9 453 40.0
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 3.7e-69 266.5 448 39.3
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 3.7e-69 266.5 442 40.5
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 3.7e-69 266.5 441 39.9
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.1e-68 265.0 448 39.7
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.4e-68 264.6 421 40.9
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.8e-68 264.2 463 37.8
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 1.8e-68 264.2 441 39.7
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 1.8e-68 264.2 442 39.6
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 4.1e-68 263.1 471 38.4
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 6.9e-68 262.3 440 41.6
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 9.1e-68 261.9 438 39.7
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 2.6e-67 260.4 481 37.8
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 4.5e-67 259.6 440 39.3
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 2.9e-66 256.9 409 41.3
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 3.8e-66 256.5 430 40.2
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 6.5e-66 255.8 439 40.1
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 3.2e-65 253.4 431 38.1
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.5e-65 252.7 444 39.9
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 1.2e-64 251.5 441 38.8
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 4.7e-64 249.6 441 38.5
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 7.9e-64 248.8 580 33.1
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 8.8e-63 245.4 385 41.0
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 3.3e-62 243.4 441 37.4
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 3.3e-62 243.4 533 36.6
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.1e-60 238.4 441 37.4
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.4e-60 237.3 439 39.0
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 2.2e-58 230.7 422 39.8
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 3.2e-57 226.9 416 37.0
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 3.6e-56 223.4 440 36.4
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 1.1e-54 218.4 446 35.4
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 3.3e-54 216.9 445 35.3
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 5.7e-54 216.1 345 42.9
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.1e-52 211.8 441 35.1
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 4.5e-51 206.5 440 34.3
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 1.5e-49 201.4 441 34.0
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.8e-47 194.5 442 33.0
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 4.8e-45 186.4 382 36.6
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.5e-43 180.3 467 31.9
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 5.9e-43 179.5 402 32.1
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 1.7e-42 177.9 443 32.5
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 2.9e-42 177.2 445 32.4
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 8.5e-42 175.6 441 30.6
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 1.5e-41 174.9 441 30.8
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 3.6e-40 170.2 440 31.6
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 4.7e-40 169.9 364 36.3
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 1.0e-39 168.7 440 31.8
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 1.0e-39 168.7 442 31.0
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 4.0e-39 166.8 438 31.7
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 2.7e-35 154.1 257 38.5
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 2.5e-33 147.5 229 45.9
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 7.2e-33 146.0 297 37.0
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 7.0e-28 129.4 386 31.6
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 1.4e-20 105.1 411 25.3
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 2.7e-19 100.9 214 29.9
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.6e-16 90.5 66 71.2
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 2.6e-14 84.3 91 48.4
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.2e-08 65.5 85 38.8
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.1e-07 60.8 73 35.6
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 5.8e-06 56.6 52 55.8
Peaxi162Scf00344g01816 Petunia axillaris HOM05D006560 ORTHO05D008164 7.5e-06 56.2 34 79.4


User provided reference genes

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