Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 7.6e-86 320.5 162 100.0
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.6e-75 286.2 147 98.0
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 6.6e-74 280.8 155 92.9
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.1e-72 275.8 155 91.0
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 8.4e-53 210.7 146 69.2
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 3.2e-52 208.8 144 71.5
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 1.4e-44 183.3 141 64.5
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 7.2e-36 154.5 149 55.0
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 7.4e-33 144.4 145 52.4
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 9.7e-33 144.1 149 50.3
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.3e-32 143.7 144 53.5
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.8e-32 142.5 142 53.5
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 8.2e-32 141.0 145 51.0
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 3.1e-31 139.0 159 47.8
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 2.6e-30 136.0 151 49.7
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 5.9e-30 134.8 159 46.5
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 1.0e-29 134.0 159 48.4
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 2.9e-29 132.5 151 47.7
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 3.8e-29 132.1 159 45.9
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 4.2e-28 128.6 151 45.7
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 4.2e-28 128.6 158 43.7
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 5.5e-28 128.3 151 47.7
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 1.6e-27 126.7 159 43.4
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.6e-27 126.7 150 48.0
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 2.1e-27 126.3 158 46.2
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 2.7e-27 125.9 159 45.9
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 6.1e-27 124.8 159 43.4
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 6.1e-27 124.8 150 46.0
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 1.8e-26 123.2 159 45.3
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 1.8e-26 123.2 161 45.3
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 2.3e-26 122.9 159 44.0
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 2.3e-26 122.9 153 44.4
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 3.0e-26 122.5 159 46.5
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 3.0e-26 122.5 159 46.5
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 3.0e-26 122.5 159 45.9
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 4.0e-26 122.1 159 42.8
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 4.0e-26 122.1 159 46.5
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 5.2e-26 121.7 145 47.6
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 5.2e-26 121.7 151 45.0
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 6.7e-26 121.3 146 43.8
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 8.8e-26 120.9 150 47.3
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.1e-25 120.6 160 45.0
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.5e-25 120.2 148 43.2
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 1.5e-25 120.2 147 46.3
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.5e-25 120.2 160 46.2
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 3.3e-25 119.0 165 43.6
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 5.7e-25 118.2 159 45.3
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 7.5e-25 117.9 150 44.7
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 9.7e-25 117.5 160 44.4
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 9.7e-25 117.5 169 42.6
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 9.7e-25 117.5 89 64.0
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.3e-24 117.1 146 45.9
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.3e-24 117.1 151 41.7
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 6.3e-24 114.8 159 41.5
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 8.2e-24 114.4 159 43.4
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 1.1e-23 114.0 159 43.4
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 1.4e-23 113.6 162 42.0
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 3.1e-23 112.5 151 40.4
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 4.1e-23 112.1 147 43.5
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 7.0e-23 111.3 151 41.7
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 7.0e-23 111.3 193 38.9
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 1.6e-22 110.2 159 40.3
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 2.0e-22 109.8 151 41.7
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 2.0e-22 109.8 151 41.7
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 2.0e-22 109.8 153 40.5
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 3.5e-22 109.0 138 45.7
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 5.9e-22 108.2 164 40.9
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 7.7e-22 107.8 151 38.4
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 1.7e-21 106.7 145 42.8
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.7e-21 106.7 156 41.7
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 2.2e-21 106.3 163 38.7
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 2.2e-21 106.3 203 36.9
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 8.5e-21 104.4 167 35.9
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 8.5e-21 104.4 145 41.4
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 8.5e-21 104.4 143 39.2
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.9e-20 103.2 145 40.7
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 3.2e-20 102.4 153 37.9
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 9.4e-20 100.9 150 42.0
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 9.4e-20 100.9 150 42.0
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.1e-19 99.8 132 45.5
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 2.7e-19 99.4 159 35.2
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 3.6e-19 99.0 159 34.6
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 3.6e-19 99.0 162 38.9
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 2.0e-17 93.2 109 46.8
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 1.8e-15 86.7 163 31.9
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 3.5e-14 82.4 151 31.1
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 4.5e-14 82.0 142 32.4
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 5.9e-14 81.6 163 31.9
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 2.9e-13 79.3 142 32.4
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 2.9e-13 79.3 142 32.4
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 2.9e-13 79.3 163 30.7
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 5.0e-13 78.6 163 30.7
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 5.0e-13 78.6 142 32.4
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 6.5e-13 78.2 151 30.5
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 8.5e-13 77.8 142 31.7
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 8.5e-13 77.8 163 30.1
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 2.5e-12 76.3 153 34.6
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 4.2e-12 75.5 142 30.3
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 2.7e-11 72.8 142 30.3
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 1.3e-08 63.9 148 31.1
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 7.7e-06 54.7 58 43.1


User provided reference genes

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