Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.0e-34 149.4 72 100.0
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.5e-30 134.0 65 98.5
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.9e-29 130.6 65 95.4
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 9.0e-23 109.8 65 80.0
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 8.4e-21 103.2 65 72.3
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 4.2e-20 100.9 65 73.8
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 2.7e-19 98.2 65 70.8
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 7.9e-19 96.7 65 69.2
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 1.3e-18 95.9 65 70.8
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 3.0e-18 94.7 69 65.2
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 5.1e-18 94.0 58 81.0
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 1.1e-17 92.8 65 69.2
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 1.5e-17 92.4 65 67.7
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 1.5e-17 92.4 65 67.7
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 1.5e-17 92.4 65 67.7
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 1.5e-17 92.4 65 66.2
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.9e-17 92.0 65 69.2
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 4.3e-17 90.9 65 66.2
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 7.4e-17 90.1 62 71.0
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 7.4e-17 90.1 62 71.0
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 7.4e-17 90.1 65 70.8
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 9.7e-17 89.7 65 67.7
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.6e-16 89.0 65 66.2
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 4.8e-16 87.4 65 66.2
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.1e-15 86.3 65 67.7
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.4e-15 85.9 51 76.5
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.4e-15 85.9 65 63.1
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.4e-15 85.9 65 63.1
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.4e-15 85.9 65 63.1
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.8e-15 85.5 62 62.9
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 2.4e-15 85.1 51 74.5
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 4.1e-15 84.3 59 71.2
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 4.1e-15 84.3 59 71.2
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 5.3e-15 84.0 51 74.5
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 5.3e-15 84.0 65 63.1
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 9.0e-15 83.2 65 61.5
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 1.5e-14 82.4 65 63.1
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 2.0e-14 82.0 65 61.5
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 2.6e-14 81.6 65 63.1
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 3.4e-14 81.3 52 71.2
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 3.4e-14 81.3 51 72.5
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 3.4e-14 81.3 49 77.6
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 4.5e-14 80.9 59 64.4
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 5.9e-14 80.5 51 72.5
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 5.9e-14 80.5 51 72.5
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 7.7e-14 80.1 66 63.6
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 1.3e-13 79.3 51 72.5
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 1.7e-13 79.0 59 66.1
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 3.8e-13 77.8 53 66.0
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 3.8e-13 77.8 66 59.1
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 5.0e-13 77.4 65 55.4
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.0e-13 77.4 60 60.0
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 6.5e-13 77.0 50 72.0
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 6.5e-13 77.0 65 56.9
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 6.5e-13 77.0 52 69.2
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 8.5e-13 76.6 58 62.1
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 8.5e-13 76.6 60 60.0
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 8.5e-13 76.6 60 60.0
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 8.5e-13 76.6 53 66.0
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 1.1e-12 76.3 65 55.4
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 1.4e-12 75.9 52 67.3
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.4e-12 75.9 53 66.0
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 1.9e-12 75.5 52 69.2
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.9e-12 75.5 48 70.8
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 2.5e-12 75.1 62 54.8
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 2.5e-12 75.1 48 68.8
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 2.5e-12 75.1 65 53.8
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 2.5e-12 75.1 59 57.6
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 5.5e-12 73.9 65 60.0
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 5.5e-12 73.9 65 60.0
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 7.2e-12 73.6 51 64.7
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 7.2e-12 73.6 65 52.3
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 7.2e-12 73.6 51 68.6
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 9.4e-12 73.2 65 56.9
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.2e-11 72.8 65 58.5
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.2e-11 72.8 65 58.5
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 1.2e-11 72.8 51 64.7
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.6e-11 72.4 51 62.7
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 2.1e-11 72.0 48 62.5
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 2.1e-11 72.0 68 63.2
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.7e-11 71.6 65 56.9
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 2.7e-11 71.6 65 55.4
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 3.6e-11 71.2 48 60.4
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 7.9e-11 70.1 48 62.5
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.0e-10 69.7 65 52.3
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 1.0e-10 69.7 48 60.4
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 1.0e-10 69.7 48 60.4
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 1.0e-10 69.7 48 60.4
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 1.0e-10 69.7 48 60.4
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 1.0e-10 69.7 48 60.4
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 1.8e-10 68.9 48 60.4
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.8e-10 68.9 48 58.3
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 1.8e-10 68.9 48 62.5
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 3.9e-10 67.8 58 60.3
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 5.1e-10 67.4 48 58.3
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 6.7e-10 67.0 52 67.3
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 1.1e-09 66.2 50 60.0
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 1.1e-09 66.2 65 56.9
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 4.8e-08 60.8 48 56.2
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 1.4e-07 59.3 65 49.2


User provided reference genes

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