Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.7e-228 795.0 419 100.0
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 8.7e-219 763.5 416 96.6
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.7e-204 714.5 416 91.3
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 7.8e-135 484.6 417 63.3
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 1.3e-129 467.2 423 61.7
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 2.4e-120 436.4 428 59.1
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 1.1e-88 331.3 423 48.2
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.3e-76 291.2 416 43.0
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 6.3e-76 288.9 420 43.6
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 1.8e-75 287.3 420 42.9
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 3.1e-75 286.6 421 42.8
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 9.1e-75 285.0 147 98.0
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 1.6e-74 284.3 422 43.6
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 2.7e-74 283.5 438 41.3
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 2.9e-73 280.0 423 42.8
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.1e-72 278.1 420 43.1
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 5.5e-72 275.8 420 43.3
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 2.3e-70 270.4 423 43.5
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 2.0e-69 267.3 421 42.0
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 9.8e-69 265.0 420 42.4
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 2.2e-68 263.8 421 42.0
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 2.8e-68 263.5 421 42.3
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 4.8e-68 262.7 421 40.6
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 4.8e-68 262.7 459 40.1
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 1.4e-67 261.2 423 41.4
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 1.4e-67 261.2 438 40.2
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 2.4e-67 260.4 421 41.6
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 7.0e-67 258.8 421 39.0
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.2e-66 258.1 398 42.0
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 1.2e-66 258.1 421 41.3
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 2.0e-66 257.3 422 41.0
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 2.7e-66 256.9 424 40.6
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 4.5e-66 256.1 429 40.6
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 5.9e-66 255.8 422 41.0
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 1.0e-65 255.0 418 40.9
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.3e-65 254.6 421 40.4
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 1.3e-65 254.6 446 39.9
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 2.3e-65 253.8 423 40.4
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 1.1e-64 251.5 421 39.4
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.5e-64 251.1 431 39.7
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 1.9e-64 250.8 422 41.2
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 2.5e-64 250.4 423 40.2
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 4.2e-64 249.6 385 41.3
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 7.2e-64 248.8 419 40.6
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 7.2e-64 248.8 431 38.1
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 1.2e-63 248.1 417 39.3
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 3.6e-63 246.5 423 39.5
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 4.7e-63 246.1 421 39.4
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 4.7e-63 246.1 433 39.7
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 1.4e-62 244.6 424 39.2
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 1.4e-62 244.6 422 40.8
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 4.0e-62 243.0 423 40.9
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 4.0e-62 243.0 421 39.2
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 5.2e-62 242.7 424 37.3
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 6.8e-62 242.3 429 38.5
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 6.8e-62 242.3 421 41.3
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 1.2e-61 241.5 423 38.8
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 3.4e-61 240.0 421 39.4
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 7.5e-61 238.8 434 38.9
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.7e-60 237.7 421 39.2
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 2.8e-60 236.9 468 37.2
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 3.7e-60 236.5 454 37.2
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 4.9e-60 236.1 444 36.3
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 1.4e-59 234.6 422 38.6
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 2.4e-59 233.8 464 36.6
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 4.1e-59 233.0 422 38.6
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 9.2e-59 231.9 402 38.6
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 1.2e-58 231.5 392 39.5
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 2.0e-58 230.7 422 38.2
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 5.9e-58 229.2 422 40.0
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 5.0e-57 226.1 422 37.7
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 6.6e-57 225.7 421 39.0
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 2.5e-56 223.8 426 39.2
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 5.6e-56 222.6 422 36.7
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 4.7e-55 219.5 561 31.9
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.2e-53 214.9 420 38.8
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.2e-52 210.7 516 34.9
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.9e-51 207.6 422 35.5
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 5.4e-51 206.1 397 36.0
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 2.3e-49 200.7 422 34.4
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 5.6e-48 196.1 428 34.6
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 6.2e-47 192.6 427 33.7
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 2.3e-46 190.7 323 40.9
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 8.9e-46 188.7 382 37.7
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 2.0e-45 187.6 399 33.3
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 3.7e-44 183.3 423 33.3
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 8.3e-44 182.2 432 32.4
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 7.0e-43 179.1 424 33.5
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.3e-41 174.9 424 32.1
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 1.7e-36 157.9 242 40.9
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 1.1e-35 155.2 424 31.6
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.2e-35 153.7 448 30.8
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 6.0e-34 149.4 421 30.9
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 3.0e-33 147.1 421 30.4
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 3.0e-33 147.1 421 30.4
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 3.9e-33 146.7 422 30.8
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 6.6e-33 146.0 423 28.8
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 8.6e-33 145.6 411 28.0
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 1.1e-32 145.2 425 30.6
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 1.9e-32 144.4 347 34.6
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 1.3e-28 131.7 385 31.7
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 1.5e-24 118.2 278 34.5
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 4.3e-24 116.7 211 41.2
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 9.9e-21 105.5 215 30.7
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 3.0e-17 94.0 390 26.4
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 1.3e-12 78.6 194 27.3
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 8.7e-09 65.9 85 41.2
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 2.1e-07 61.2 47 68.1
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 2.1e-07 61.2 73 38.4
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 3.1e-06 57.4 44 61.4


User provided reference genes

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