Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 0.0e+00 1104.7 569 100.0
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 4.2e-216 755.0 435 92.2
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 1.4e-211 740.0 576 68.8
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 7.5e-205 717.6 416 91.3
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 2.4e-203 712.6 610 64.4
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 5.4e-195 684.9 580 65.2
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 8.1e-159 564.7 572 55.8
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 5.3e-150 535.4 571 52.4
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 7.4e-144 515.0 577 51.8
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 6.2e-143 511.9 556 52.0
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 1.5e-141 507.3 574 51.0
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 2.6e-141 506.5 586 49.5
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 4.9e-140 502.3 595 49.7
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 7.1e-139 498.4 573 49.6
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 6.0e-138 495.4 564 50.9
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 3.0e-137 493.0 578 49.3
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 1.9e-136 490.3 578 50.3
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.4e-134 483.4 545 51.6
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 2.4e-134 483.4 575 49.2
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 4.0e-134 482.6 606 47.7
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 8.4e-132 474.9 540 50.0
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 1.1e-131 474.6 575 46.3
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 4.2e-131 472.6 571 48.2
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 7.1e-131 471.9 578 48.1
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 6.0e-130 468.8 569 48.3
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 1.0e-129 468.0 577 47.1
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 1.8e-129 467.2 577 48.0
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 5.1e-129 465.7 583 47.9
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 8.7e-129 464.9 568 47.7
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.1e-128 464.5 577 49.2
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 1.5e-128 464.2 572 47.2
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 1.9e-128 463.8 555 51.4
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 2.5e-128 463.4 713 41.2
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 7.4e-128 461.8 577 49.0
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 9.7e-128 461.5 560 49.1
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 3.7e-127 459.5 570 48.6
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 2.4e-126 456.8 583 47.9
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 5.3e-126 455.7 563 46.7
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.5e-125 454.1 575 46.6
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 1.5e-125 454.1 574 47.0
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 2.0e-125 453.8 574 47.6
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 2.0e-125 453.8 577 48.5
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 4.5e-125 452.6 576 47.2
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 7.6e-125 451.8 579 46.6
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.3e-124 451.1 585 45.3
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 8.5e-124 448.4 579 46.3
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.2e-122 444.5 571 46.6
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 2.7e-122 443.4 568 47.4
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 8.8e-121 438.3 582 46.2
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 4.3e-120 436.0 578 46.7
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 2.8e-119 433.3 585 45.3
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 2.4e-118 430.3 576 44.8
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 4.1e-118 429.5 593 45.4
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 9.1e-118 428.3 576 44.6
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 1.2e-117 427.9 541 49.0
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.6e-117 426.8 692 42.2
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 1.0e-116 424.9 505 49.9
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.7e-116 424.1 576 43.8
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.0e-116 422.5 578 45.2
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 1.1e-115 421.4 554 47.5
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 1.9e-115 420.6 606 44.1
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 2.1e-114 417.2 576 44.6
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 1.1e-112 411.4 546 46.0
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.5e-112 411.0 572 44.8
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 3.7e-111 406.4 504 48.0
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 8.2e-111 405.2 588 43.7
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.2e-109 401.4 592 43.4
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 2.6e-109 400.2 576 42.7
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 3.4e-109 399.8 575 44.0
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 8.5e-108 395.2 582 43.0
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 2.5e-107 393.7 521 46.3
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 5.5e-107 392.5 586 40.8
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.7e-106 390.2 542 44.6
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.5e-104 384.4 577 41.6
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 1.8e-102 377.5 577 40.4
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 5.9e-101 372.5 505 47.3
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 6.5e-100 369.0 516 44.4
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 4.2e-99 366.3 616 38.6
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 2.7e-98 363.6 576 39.9
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 1.6e-93 347.8 570 39.5
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 5.9e-93 345.9 576 39.1
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 1.3e-92 344.7 578 38.6
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 2.2e-92 344.0 524 43.3
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 3.8e-92 343.2 578 38.1
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 1.1e-91 341.7 578 38.1
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 1.9e-91 340.9 576 37.2
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 9.4e-91 338.6 576 38.2
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 1.4e-89 334.7 571 38.5
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 2.4e-86 323.9 558 38.0
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 1.1e-83 315.1 472 42.8
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 8.0e-82 308.9 518 39.8
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 1.2e-77 295.0 570 37.2
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 2.7e-77 293.9 553 39.1
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 6.6e-76 289.3 477 42.1
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.5e-75 288.1 438 42.2
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.0e-73 280.4 597 34.8
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 9.8e-72 275.4 155 91.0
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 2.3e-68 264.2 410 42.7
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 4.3e-67 260.0 334 41.6
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 5.6e-67 259.6 403 40.2
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 4.7e-66 256.5 203 61.6
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 1.2e-61 241.9 356 44.4
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.1e-60 236.5 119 95.0
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 3.3e-59 233.8 422 38.4
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 2.6e-56 224.2 191 55.0
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 4.1e-54 216.9 213 54.0
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 4.0e-49 200.3 148 66.9
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.6e-48 197.6 148 66.2
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 9.0e-41 172.6 137 65.0
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 4.9e-39 166.8 313 39.9
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 8.4e-39 166.0 596 27.3
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 7.1e-38 162.9 245 47.3
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.1e-27 129.0 65 95.4
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 4.3e-27 127.1 119 54.6
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 2.0e-24 118.2 636 24.2
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.3e-19 100.9 82 67.1
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 3.4e-16 90.9 192 32.3
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 4.5e-16 90.5 74 56.8
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 6.5e-07 60.1 60 51.7
Dinv24123 Davidia involucrata HOM05D006560 ORTHO05D008164 7.2e-06 56.6 28 85.7


User provided reference genes

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