Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J01368 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.2e-65 253.1 134 100.0
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.5e-15 86.7 50 84.0
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 4.1e-13 78.6 50 76.0
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.2e-12 77.0 50 76.0
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.2e-12 77.0 50 76.0
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.2e-12 77.0 50 74.0
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 3.5e-12 75.5 49 71.4
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.8e-12 74.3 50 72.0
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.8e-12 74.3 50 72.0
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.8e-12 74.3 50 72.0
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.8e-12 74.3 50 72.0
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 7.8e-12 74.3 50 72.0
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 1.0e-11 73.9 50 72.0
GSVIVG01034287001 Vitis vinifera HOM05D000216 ORTHO05D000634 1.7e-11 73.2 50 70.0
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.3e-11 72.8 50 70.0
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 3.0e-11 72.4 50 70.0
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 5.1e-11 71.6 50 70.0
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 6.6e-11 71.2 50 70.0
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 1.5e-10 70.1 50 68.0
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 1.5e-10 70.1 50 68.0
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 1.5e-10 70.1 50 68.0
BraSC151t45695Z Brassica rapa HOM05D000216 ORTHO05D000634 1.5e-10 70.1 50 68.0
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 1.5e-10 70.1 50 72.0
CARHR281920 Cardamine hirsuta HOM05D000216 ORTHO05D000634 1.9e-10 69.7 50 68.0
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 2.5e-10 69.3 48 72.9
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.5e-10 69.3 49 69.4
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 9.6e-10 67.4 50 66.0
Gohir.A09G101340 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.2e-09 67.0 50 66.0
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.2e-09 67.0 51 64.7
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.6e-09 66.6 50 66.0
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 2.1e-09 66.2 50 64.0
HanXRQChr00c0300g0573171 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-09 66.2 50 64.0
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-09 66.2 50 64.0
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.1e-09 66.2 50 64.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.1e-09 66.2 50 64.0
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.8e-09 65.9 50 62.0
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 4.7e-09 65.1 49 67.3
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 4.7e-09 65.1 49 67.3
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 4.7e-09 65.1 49 67.3
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 4.7e-09 65.1 50 62.0
Potri.019G027580 Populus trichocarpa HOM05D000216 ORTHO05D000634 4.7e-09 65.1 50 62.0
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 6.2e-09 64.7 50 62.0
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 8.1e-09 64.3 50 62.0
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 1.1e-08 63.9 50 60.0
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 1.1e-08 63.9 50 60.0
HanXRQChr14g0455011 Helianthus annuus HOM05D000216 ORTHO05D000634 1.8e-08 63.2 50 62.0
Gorai.008G142400 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.0e-08 62.0 50 62.0
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 5.2e-08 61.6 49 61.2
Migut.D01415 Erythranthe guttata HOM05D000216 ORTHO05D000634 5.2e-08 61.6 34 85.3
Gohir.D12G131101 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.2e-08 61.6 50 62.0
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.2e-07 60.5 42 69.0
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.2e-07 60.5 42 69.0
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 2.6e-07 59.3 35 80.0
Solyc01g017510.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.7e-06 56.6 42 66.7
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-06 54.3 35 74.3
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.4e-06 54.3 35 74.3


User provided reference genes

Program Settings