Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.J00937 Erythranthe guttata HOM05D001514 ORTHO05D005209 8.7e-125 450.3 222 100.0
SGA_v2.0_scaffold97G29140 Striga asiatica HOM05D001514 ORTHO05D005209 1.3e-109 399.8 221 88.2
SalBow6G1458 Salvia bowleyana HOM05D001514 ORTHO05D005209 3.3e-108 395.2 221 86.0
MSTRG.6002 Avicennia marina HOM05D001514 ORTHO05D005209 2.0e-105 386.0 221 83.3
SalBow3G1655 Salvia bowleyana HOM05D001514 ORTHO05D005209 3.8e-104 381.7 216 85.2
Cc06_g12020 Coffea canephora HOM05D001514 ORTHO05D005209 4.2e-103 378.3 221 81.9
Nitab4.5_0011363g0010 Nicotiana tabacum HOM05D001514 ORTHO05D005209 4.3e-100 368.2 221 80.5
Solyc12g009090.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.2e-99 365.9 222 80.2
PGSC0003DMG400000323 Solanum tuberosum HOM05D001514 ORTHO05D005209 4.8e-99 364.8 222 79.7
Sopen12g004040 Solanum pennellii HOM05D001514 ORTHO05D005209 6.3e-99 364.4 222 79.7
Lsat_1_v5_gn_7_35041 Lactuca sativa HOM05D001514 ORTHO05D005209 2.5e-95 352.4 215 78.1
Nitab4.5_0000073g0250 Nicotiana tabacum HOM05D001514 ORTHO05D005209 3.6e-94 348.6 223 77.6
CSS0005970 Camellia sinensis var. sinensis HOM05D001514 ORTHO05D005209 5.1e-93 344.7 221 74.2
TWI60G0494 Tripterygium wilfordii HOM05D001514 ORTHO05D005209 5.1e-93 344.7 215 75.3
Dinv42376 Davidia involucrata HOM05D001514 ORTHO05D005209 6.7e-93 344.4 215 75.8
CiPaw.03G207800 Carya illinoinensis HOM05D001514 ORTHO05D005209 4.3e-92 341.7 221 73.3
Prupe.7G201200 Prunus persica HOM05D001514 ORTHO05D005209 5.7e-92 341.3 222 71.6
Hma1.2p1_0928F.1_g237710 Hydrangea macrophylla HOM05D001514 ORTHO05D005209 2.2e-91 339.3 216 75.5
ECA233G5402 Erigeron canadensis HOM05D001514 ORTHO05D005209 1.1e-90 337.0 216 75.0
Haze_10270 Corylus avellana HOM05D001514 ORTHO05D005209 1.4e-90 336.7 221 71.5
MBI13_g11335_MAGBIO Magnolia biondii HOM05D001514 ORTHO05D005209 1.4e-90 336.7 213 74.2
Manes.03G199800 Manihot esculenta HOM05D001514 ORTHO05D005209 3.1e-90 335.5 213 74.6
HanXRQChr09g0237811 Helianthus annuus HOM05D001514 ORTHO05D005209 2.6e-89 332.4 216 74.1
QL11p000460 Quercus lobata HOM05D001514 ORTHO05D005209 2.6e-89 332.4 221 70.1
Ciclev10012695m.g Citrus clementina HOM05D001514 ORTHO05D005209 4.5e-89 331.6 221 71.5
Thecc.09G079100 Theobroma cacao HOM05D001514 ORTHO05D005209 5.9e-89 331.3 221 69.7
TAR626G0523 Trochodendron aralioides HOM05D001514 ORTHO05D005209 2.9e-88 328.9 213 72.3
TAR626G1304 Trochodendron aralioides HOM05D001514 ORTHO05D005209 2.9e-88 328.9 213 72.3
Potri.006G143400 Populus trichocarpa HOM05D001514 ORTHO05D005209 5.0e-88 328.2 213 70.9
Lj7A685T53 Lonicera japonica HOM05D001514 ORTHO05D005209 6.5e-88 327.8 263 62.4
Atru.chr7.1692 Acer truncatum HOM05D001514 ORTHO05D005209 8.5e-88 327.4 222 70.7
Nn8g38685 Nelumbo nucifera HOM05D001514 ORTHO05D005209 8.5e-88 327.4 213 71.8
Eucgr.C00825 Eucalyptus grandis HOM05D001514 ORTHO05D005209 1.1e-87 327.0 221 68.8
TAR383G0900 Trochodendron aralioides HOM05D001514 ORTHO05D005209 1.1e-87 327.0 212 71.2
Gohir.A13G191300 Gossypium hirsutum HOM05D001514 ORTHO05D005209 1.9e-87 326.2 221 68.8
COL.COLO4_18112 Corchorus olitorius HOM05D001514 ORTHO05D005209 3.2e-87 325.5 221 68.8
MD15G1215700 Malus domestica HOM05D001514 ORTHO05D005209 7.2e-87 324.3 212 71.2
CsaV3_2G001190 Cucumis sativus L. HOM05D001514 ORTHO05D005209 1.2e-86 323.6 222 70.7
Nitab4.5_0001866g0080 Nicotiana tabacum HOM05D001514 ORTHO05D005209 1.6e-86 323.2 213 75.6
Cpa.g.sc280.6 Carica papaya HOM05D001514 ORTHO05D005209 2.7e-86 322.4 221 69.2
Duzib168G1760 Durio zibethinus HOM05D001514 ORTHO05D005209 3.6e-86 322.0 223 68.6
MD15G1215800 Malus domestica HOM05D001514 ORTHO05D005209 4.7e-86 321.6 219 68.0
EL10Ac8g19111 Beta vulgaris HOM05D001514 ORTHO05D005209 2.3e-85 319.3 221 65.6
Gohir.D13G196700 Gossypium hirsutum HOM05D001514 ORTHO05D005209 3.9e-85 318.5 221 67.9
Gorai.013G225400 Gossypium raimondii HOM05D001514 ORTHO05D005209 5.1e-85 318.2 221 67.9
AUR62025186 Chenopodium quinoa HOM05D001514 ORTHO05D005209 6.7e-85 317.8 215 66.0
ClCG11G001470 Citrullus lanatus HOM05D001514 ORTHO05D005209 8.8e-85 317.4 241 66.0
Haze_25985 Corylus avellana HOM05D001514 ORTHO05D005209 1.1e-84 317.0 258 61.2
Haze_25993 Corylus avellana HOM05D001514 ORTHO05D005209 1.1e-84 317.0 258 61.2
Solyc05g041170.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.1e-84 317.0 214 68.2
GSVIVG01015097001 Vitis vinifera HOM05D001514 ORTHO05D005209 9.7e-84 313.9 222 66.2
Hund08725 Selenicereus undatus HOM05D001514 ORTHO05D005209 3.7e-83 312.0 213 64.8
FvH4_1g08420 Fragaria vesca HOM05D001514 ORTHO05D005209 4.8e-83 311.6 217 65.4
THA.LOC104808891 Tarenaya hassleriana HOM05D001514 ORTHO05D005209 6.3e-83 311.2 221 67.0
PGR142G1966 Punica granatum HOM05D001514 ORTHO05D005209 8.2e-83 310.8 215 68.8
Sed0009954 Sechium edule HOM05D001514 ORTHO05D005209 8.2e-83 310.8 216 70.4
RcHm_v2.0_Chr2g0094521 Rosa chinensis HOM05D001514 ORTHO05D005209 1.4e-82 310.1 218 67.0
ATR0598G338 Amborella trichopoda HOM05D001514 ORTHO05D005209 5.3e-82 308.1 213 65.7
Aa31sc437G10 Aethionema arabicum HOM05D001514 ORTHO05D005209 9.1e-82 307.4 215 67.9
AL4G21890 Arabidopsis lyrata HOM05D001514 ORTHO05D005209 2.0e-81 306.2 215 67.0
Lj4g0013364 Lotus japonicus HOM05D001514 ORTHO05D005209 2.0e-81 306.2 218 66.5
BcaC02g10956 Brassica carinata HOM05D001514 ORTHO05D005209 3.5e-81 305.4 215 66.5
C04p23290 Brassica napus HOM05D001514 ORTHO05D005209 3.5e-81 305.4 215 66.5
BcaB02g10157 Brassica carinata HOM05D001514 ORTHO05D005209 4.5e-81 305.1 215 67.0
Sabra06G0113700 Salix brachista HOM05D001514 ORTHO05D005209 5.9e-81 304.7 241 62.2
MELO3C004649.2 Cucumis melo HOM05D001514 ORTHO05D005209 7.7e-81 304.3 221 68.8
Thhalv10002659m.g Eutrema salsugineum HOM05D001514 ORTHO05D005209 7.7e-81 304.3 215 67.0
Sp4g11040 Schrenkiella parvula HOM05D001514 ORTHO05D005209 1.3e-80 303.5 215 67.0
Carub.0004s0911 Capsella rubella HOM05D001514 ORTHO05D005209 5.0e-80 301.6 215 65.6
AT2G28230 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 1.1e-79 300.4 215 66.0
Peaxi162Scf00928g00034 Petunia axillaris HOM05D001514 ORTHO05D005209 1.1e-79 300.4 216 69.9
A07p18760 Brassica napus HOM05D001514 ORTHO05D005209 3.2e-79 298.9 217 64.5
vmacro06328 Vaccinium macrocarpon HOM05D001514 ORTHO05D005209 7.2e-79 297.7 250 59.6
BolC4t23831H Brassica oleracea HOM05D001514 ORTHO05D005209 2.1e-78 296.2 210 67.1
Carub.0004s0910 Capsella rubella HOM05D001514 ORTHO05D005209 4.7e-78 295.0 217 63.1
THA.LOC104826585 Tarenaya hassleriana HOM05D001514 ORTHO05D005209 6.1e-78 294.7 235 61.7
Glyma.13G109300 Glycine max HOM05D001514 ORTHO05D005209 5.2e-77 291.6 218 61.9
HPP92_009229 Vanilla planifolia HOM05D001514 ORTHO05D005209 6.7e-77 291.2 212 63.2
Ca_21314_v3 Cicer arietinum L. HOM05D001514 ORTHO05D005209 8.8e-77 290.8 215 61.4
Phvul.003G131900 Phaseolus vulgaris HOM05D001514 ORTHO05D005209 1.1e-76 290.4 218 63.8
Glyma.17G050300 Glycine max HOM05D001514 ORTHO05D005209 1.5e-76 290.0 218 61.5
Psat4g016720 Pisum sativum HOM05D001514 ORTHO05D005209 1.5e-76 290.0 215 62.3
Solyc10g054950.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.5e-76 290.0 215 63.7
PSO210G4222 Papaver somniferum HOM05D001514 ORTHO05D005209 2.0e-76 289.7 215 63.3
TPR.G9427 Trifolium pratense HOM05D001514 ORTHO05D005209 3.3e-76 288.9 219 61.6
Solyc10g049510.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.7e-76 288.1 217 62.2
BraA07t29585Z Brassica rapa HOM05D001514 ORTHO05D005209 9.7e-76 287.3 212 64.6
arahy.Tifrunner.gnm1.ann1.0DN5L0 Arachis hypogaea HOM05D001514 ORTHO05D005209 1.3e-75 287.0 215 61.4
arahy.Tifrunner.gnm1.ann1.0TW07M Arachis hypogaea HOM05D001514 ORTHO05D005209 1.3e-75 287.0 215 61.4
arahy.Tifrunner.gnm1.ann1.I7BKR8 Arachis hypogaea HOM05D001514 ORTHO05D005209 1.3e-75 287.0 215 61.4
PSO386G0176 Papaver somniferum HOM05D001514 ORTHO05D005209 1.3e-75 287.0 215 62.3
Medtr4g125510 Medicago truncatula HOM05D001514 ORTHO05D005209 2.8e-75 285.8 218 61.0
Medtr2g063927 Medicago truncatula HOM05D001514 ORTHO05D005209 5.3e-74 281.6 215 61.4
AUR62028988 Chenopodium quinoa HOM05D001514 ORTHO05D005209 9.1e-74 280.8 194 66.0
Actinidia29922 Actinidia chinensis HOM05D001514 ORTHO05D005209 2.7e-73 279.3 180 73.9
CDE05G2440 Ceratophyllum demersum HOM05D001514 ORTHO05D005209 2.7e-73 279.3 216 58.8
Aqoxy7G01056 Aquilegia oxysepala HOM05D001514 ORTHO05D005209 3.5e-73 278.9 217 58.5
Lalb_Chr07g0181101 Lupinus albus HOM05D001514 ORTHO05D005209 4.5e-73 278.5 215 58.1
AT4G09070 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 7.7e-73 277.7 215 60.5
VMungo1215G3125 Vigna mungo HOM05D001514 ORTHO05D005209 1.7e-72 276.6 202 64.4
Aqoxy7G01057 Aquilegia oxysepala HOM05D001514 ORTHO05D005209 2.9e-72 275.8 217 58.1
Zm00001eb314270 Zea mays HOM05D001514 ORTHO05D005209 5.5e-71 271.6 217 57.1
Os09g0443500 Oryza sativa ssp. japonica HOM05D001514 ORTHO05D005209 1.4e-69 266.9 222 55.4
Thhalv10017586m.g Eutrema salsugineum HOM05D001514 ORTHO05D005209 1.3e-67 260.4 215 59.5
Solyc10g055100.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 4.1e-66 255.4 215 58.1
Solyc10g055160.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 7.0e-66 254.6 185 63.8
Rhsim03G0229200 Rhododendron simsii HOM05D001514 ORTHO05D005209 7.7e-65 251.1 169 71.6
PGSC0003DMG400027872 Solanum tuberosum HOM05D001514 ORTHO05D005209 7.7e-65 251.1 187 63.1
Solyc10g055020.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.8e-64 248.8 221 56.1
CANSAT11G2059 Cannabis sativa HOM05D001514 ORTHO05D005209 4.2e-63 245.4 163 72.4
Carub.0006s2765 Capsella rubella HOM05D001514 ORTHO05D005209 9.5e-63 244.2 212 50.9
CARHR121150 Cardamine hirsuta HOM05D001514 ORTHO05D005209 8.0e-62 241.1 215 55.8
Sabra06G0112300 Salix brachista HOM05D001514 ORTHO05D005209 1.4e-61 240.4 160 71.2
Actinidia38471 Actinidia chinensis HOM05D001514 ORTHO05D005209 5.2e-61 238.4 223 59.6
DCAR_024739 Daucus carota HOM05D001514 ORTHO05D005209 8.8e-61 237.7 141 78.7
Solyc10g054980.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 4.4e-60 235.3 213 55.4
PGSC0003DMG400024425 Solanum tuberosum HOM05D001514 ORTHO05D005209 4.4e-60 235.3 170 64.1
Sc08g0008840 Simmondsia chinensis HOM05D001514 ORTHO05D005209 1.3e-59 233.8 163 68.7
Sc08g0009330 Simmondsia chinensis HOM05D001514 ORTHO05D005209 1.3e-59 233.8 163 68.7
Nitab4.5_0000073g0220 Nicotiana tabacum HOM05D001514 ORTHO05D005209 4.9e-59 231.9 136 82.4
CAN.G1963.7 Capsicum annuum HOM05D001514 ORTHO05D005209 1.8e-58 229.9 170 66.5
FAN26G1993 Fragaria x ananassa HOM05D001514 ORTHO05D005209 1.8e-58 229.9 165 65.5
unitig_749.g14240 Utricularia gibba HOM05D001514 ORTHO05D005209 7.0e-58 228.0 149 75.2
Mapoly0097s0017 Marchantia polymorpha HOM05D001514 ORTHO05D005209 1.2e-57 227.3 208 48.1
DCAR_026438 Daucus carota HOM05D001514 ORTHO05D005209 1.7e-56 223.4 142 74.6
SMO141G0192 Selaginella moellendorffii HOM05D001514 ORTHO05D005209 2.9e-56 222.6 212 49.5
FAN26G0729 Fragaria x ananassa HOM05D001514 ORTHO05D005209 7.3e-55 218.0 185 58.4
CAN.G2532.1 Capsicum annuum HOM05D001514 ORTHO05D005209 1.8e-53 213.4 159 66.0
CAN.G299.3 Capsicum annuum HOM05D001514 ORTHO05D005209 2.3e-53 213.0 125 83.2
Sopen10g024920 Solanum pennellii HOM05D001514 ORTHO05D005209 1.5e-52 210.3 163 61.3
PGSC0003DMG400040125 Solanum tuberosum HOM05D001514 ORTHO05D005209 1.0e-48 197.6 212 48.6
Pp3c7_2780 Physcomitrium patens HOM05D001514 ORTHO05D005209 8.6e-48 194.5 208 44.2
Solyc10g055010.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 8.6e-48 194.5 143 62.9
Solyc10g055070.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.5e-47 193.0 163 57.1
Psat0s2317g0240 Pisum sativum HOM05D001514 ORTHO05D005209 7.3e-47 191.4 211 43.6
CAN.G1774.14 Capsicum annuum HOM05D001514 ORTHO05D005209 1.4e-45 187.2 144 65.3
Psat0s4474g0080 Pisum sativum HOM05D001514 ORTHO05D005209 7.5e-44 181.4 211 39.8
PGSC0003DMG400003348 Solanum tuberosum HOM05D001514 ORTHO05D005209 2.2e-43 179.9 129 65.9
AagrBONN_evm.TU.Sc2ySwM_344.5098 Anthoceros agrestis HOM05D001514 ORTHO05D005209 4.9e-43 178.7 190 46.8
CBR_g11153 Chara braunii HOM05D001514 ORTHO05D005209 8.3e-43 177.9 216 38.4
Solyc10g055150.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.9e-42 176.8 138 62.3
Sopen10g024960 Solanum pennellii HOM05D001514 ORTHO05D005209 2.7e-41 172.9 123 66.7
Solyc10g049550.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.9e-40 169.1 135 60.0
Solyc10g055130.2 Solanum lycopersicum HOM05D001514 ORTHO05D005209 6.8e-37 158.3 118 62.7
MD02G1088400 Malus domestica HOM05D001514 ORTHO05D005209 4.4e-36 155.6 167 49.7
Manes.15G009400 Manihot esculenta HOM05D001514 ORTHO05D005209 2.2e-35 153.3 117 65.8
Sopen10g024890 Solanum pennellii HOM05D001514 ORTHO05D005209 1.2e-33 147.5 101 67.3
Sopen10g024880 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-27 124.8 91 65.9
DCAR_024738 Daucus carota HOM05D001514 ORTHO05D005209 1.0e-24 117.9 73 74.0
Sopen12g011120 Solanum pennellii HOM05D001514 ORTHO05D005209 1.2e-22 110.9 79 63.3
Solyc10g055040.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 7.6e-20 101.7 143 39.9
CAN.G1963.4 Capsicum annuum HOM05D001514 ORTHO05D005209 2.4e-18 96.7 130 43.1
Oeu055661.2 Olea europaea HOM05D001514 ORTHO05D005209 4.2e-18 95.9 52 80.8
Rhsim03G0228900 Rhododendron simsii HOM05D001514 ORTHO05D005209 9.3e-18 94.7 52 76.9
Solyc12g062270.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.3e-16 90.1 111 44.1
Potri.005G126902 Populus trichocarpa HOM05D001514 ORTHO05D005209 1.9e-15 87.0 73 57.5
Cre11.g476900 Chlamydomonas reinhardtii HOM05D001514 ORTHO05D005209 1.2e-12 77.8 163 30.1
AT2G28020 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 1.6e-09 67.4 68 50.0
ECA233G2563 Erigeron canadensis HOM05D000517 ORTHO05D000751 3.5e-09 66.2 97 43.3
BcaC07g40291 Brassica carinata HOM05D001514 ORTHO05D005209 2.5e-07 60.1 54 57.4
C08p34050 Brassica napus HOM05D001514 ORTHO05D005209 2.5e-07 60.1 54 57.4
BolC8t51003H Brassica oleracea HOM05D001514 ORTHO05D005209 4.3e-07 59.3 54 55.6
Solyc10g055030.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.6e-06 57.4 49 53.1


User provided reference genes

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