Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 0.0e+00 1565.4 797 100.0
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 0.0e+00 1076.2 875 66.9
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 2.8e-306 1055.0 854 67.7
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 2.1e-298 1028.9 889 64.5
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 1.0e-260 903.7 849 59.0
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 1.0e-260 903.7 851 58.6
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 2.5e-259 899.0 849 58.5
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 1.6e-258 896.3 854 58.8
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 1.7e-255 886.3 874 57.3
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 5.5e-246 854.7 811 58.6
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 1.1e-243 847.0 764 59.7
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 4.3e-243 845.1 905 53.8
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 7.2e-238 827.8 813 58.5
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 9.4e-238 827.4 894 53.6
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 1.8e-236 823.2 895 52.7
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 7.4e-235 817.8 846 55.3
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 9.7e-235 817.4 920 52.1
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 1.4e-233 813.5 909 52.6
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 3.5e-232 808.9 912 52.2
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 1.7e-231 806.6 903 51.9
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 1.9e-230 803.1 882 51.9
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 4.2e-230 802.0 900 53.0
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 8.0e-229 797.7 849 53.5
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 3.0e-228 795.8 820 55.0
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 3.7e-226 788.9 825 54.7
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 1.4e-225 786.9 857 52.5
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 1.2e-224 783.9 884 51.2
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 2.6e-224 782.7 774 56.2
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 3.5e-224 782.3 970 49.7
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 3.5e-224 782.3 888 51.4
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 5.9e-224 781.6 922 51.1
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 7.7e-224 781.2 840 53.3
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 5.0e-223 778.5 914 50.0
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 9.4e-222 774.2 805 54.2
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 2.1e-221 773.1 814 54.8
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 2.7e-221 772.7 807 55.1
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 1.0e-220 770.8 876 51.6
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 6.8e-220 768.1 867 51.0
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 1.5e-219 766.9 862 51.7
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 3.7e-218 762.3 764 55.0
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 6.3e-218 761.5 849 53.5
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 1.1e-217 760.8 821 51.9
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 1.2e-216 757.3 914 47.9
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 7.7e-216 754.6 861 52.3
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 5.0e-215 751.9 743 56.5
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 1.9e-214 750.0 859 51.5
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 2.5e-214 749.6 817 53.7
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 7.2e-214 748.0 868 49.5
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 9.4e-214 747.7 886 49.8
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 2.7e-213 746.1 738 56.4
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 4.0e-212 742.3 800 51.4
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 5.2e-212 741.9 828 52.1
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 6.8e-212 741.5 717 57.2
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 1.2e-211 740.7 764 53.8
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 4.4e-211 738.8 764 53.4
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 5.7e-211 738.4 906 48.3
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 2.2e-210 736.5 845 51.1
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 2.3e-207 726.5 823 51.9
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 3.8e-207 725.7 779 51.7
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 3.8e-207 725.7 779 51.7
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 8.6e-207 724.5 717 57.3
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 6.1e-205 718.4 890 48.2
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 2.3e-204 716.5 778 52.4
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 5.2e-204 715.3 806 50.2
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 6.8e-204 714.9 849 49.1
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 2.6e-203 713.0 739 52.6
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 3.4e-203 712.6 793 51.2
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 9.8e-203 711.1 826 49.9
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 2.2e-202 709.9 798 50.6
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 6.4e-202 708.4 817 50.3
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 1.8e-201 706.8 861 49.4
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 1.6e-200 703.7 784 51.1
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 2.7e-200 703.0 802 50.9
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 4.6e-200 702.2 786 50.8
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 7.8e-200 701.4 860 48.4
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 7.8e-200 701.4 861 49.6
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 7.3e-198 694.9 841 47.9
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 1.6e-197 693.7 735 53.7
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 3.6e-197 692.6 855 48.7
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 3.6e-197 692.6 883 47.0
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 4.0e-196 689.1 906 47.0
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 2.0e-195 686.8 801 49.7
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 2.6e-195 686.4 806 49.8
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 2.6e-195 686.4 767 53.1
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 5.8e-195 685.3 753 52.7
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 5.8e-195 685.3 625 61.0
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 7.5e-195 684.9 801 49.8
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 7.0e-193 678.3 783 50.4
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 1.2e-192 677.6 823 49.6
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 1.0e-191 674.5 752 51.6
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 4.7e-189 665.6 805 48.2
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 1.9e-185 653.7 749 49.9
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 4.6e-184 649.0 892 44.6
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 1.7e-183 647.1 706 50.4
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 2.9e-178 629.8 590 58.5
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 6.2e-165 585.5 875 42.2
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 2.4e-164 583.6 609 55.5
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 1.5e-158 564.3 698 49.3
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 3.2e-153 546.6 502 57.4
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 1.2e-152 544.7 568 55.3
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 3.9e-151 539.7 557 53.5
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.1e-150 538.1 833 40.0
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.5e-150 537.7 808 41.1
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 3.7e-141 506.5 951 37.7
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 1.9e-129 467.6 850 37.2
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 2.0e-126 457.6 883 36.6
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 5.7e-102 376.3 1079 29.5
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 5.2e-95 353.2 391 48.6
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 2.1e-88 331.3 384 50.8
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 3.1e-55 221.1 287 48.1
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 4.3e-49 200.7 533 29.6
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 6.9e-47 193.4 757 26.7
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 4.2e-44 184.1 356 35.1
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 4.2e-44 184.1 384 32.3
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 7.6e-30 136.7 315 32.1
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.2e-27 129.4 145 50.3
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 3.9e-26 124.4 205 42.9
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 3.7e-24 117.9 705 24.4
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 8.5e-21 106.7 605 25.3
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 1.0e-13 83.2 165 33.9
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 1.6e-11 75.9 92 46.7


User provided reference genes

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