Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 0.0e+00 1102.8 536 100.0
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 1.2e-284 982.6 533 88.7
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 6.4e-283 976.9 533 87.8
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 4.0e-277 957.6 533 87.2
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 3.5e-273 944.5 536 85.8
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 3.3e-271 937.9 534 85.6
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 5.7e-271 937.2 533 85.7
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 1.8e-269 932.2 533 85.2
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 2.6e-268 928.3 541 83.7
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 4.5e-268 927.5 533 84.8
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 1.0e-267 926.4 533 84.6
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 7.2e-266 920.2 552 82.1
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 2.3e-264 915.2 539 82.0
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 2.3e-264 915.2 533 84.2
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 2.3e-264 915.2 541 82.4
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.1e-263 912.9 531 84.0
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 2.5e-263 911.8 533 82.6
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 1.8e-261 905.6 534 81.6
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 6.9e-261 903.7 533 83.1
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 2.6e-260 901.7 535 81.1
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 3.4e-260 901.4 535 81.7
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 1.7e-259 899.0 535 82.1
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.7e-259 899.0 543 80.7
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 2.2e-259 898.7 533 82.4
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 6.5e-259 897.1 537 81.2
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 8.5e-259 896.7 542 80.1
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 3.2e-258 894.8 528 82.6
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 3.2e-258 894.8 536 80.2
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 5.5e-258 894.0 535 81.5
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 5.5e-258 894.0 543 78.8
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.6e-257 892.5 544 79.6
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 2.7e-257 891.7 535 79.1
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 4.6e-257 891.0 543 79.7
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 1.4e-256 889.4 540 80.7
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 1.4e-256 889.4 538 79.9
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 2.3e-256 888.6 537 79.3
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 8.8e-256 886.7 524 83.0
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 8.8e-256 886.7 535 79.3
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 1.1e-255 886.3 533 80.3
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.1e-255 886.3 543 79.0
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 1.1e-255 886.3 594 75.6
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 2.0e-255 885.6 534 78.8
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 3.3e-255 884.8 537 79.7
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 5.7e-255 884.0 545 78.7
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 5.7e-255 884.0 570 76.1
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 3.7e-254 881.3 538 78.8
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 8.2e-254 880.2 535 79.6
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.2e-254 880.2 558 77.2
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 8.2e-254 880.2 536 79.9
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 1.1e-253 879.8 534 79.2
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 1.8e-253 879.0 564 75.7
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 2.4e-253 878.6 526 79.7
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 3.1e-253 878.2 536 79.7
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 5.3e-253 877.5 536 79.5
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.5e-252 875.9 524 80.0
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 1.5e-252 875.9 524 80.0
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.6e-252 875.2 543 77.9
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 5.9e-252 874.0 592 73.6
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 7.7e-252 873.6 469 88.7
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 1.7e-251 872.5 522 81.2
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 2.9e-251 871.7 519 80.0
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.1e-250 869.8 526 78.9
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 1.1e-250 869.8 525 78.9
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 4.2e-250 867.8 537 77.7
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 4.2e-250 867.8 521 79.8
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 5.5e-250 867.5 535 78.3
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 9.4e-250 866.7 539 78.5
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 1.0e-248 863.2 525 77.9
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 3.0e-248 861.7 530 77.5
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 5.1e-248 860.9 524 78.2
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 6.7e-248 860.5 542 78.0
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 1.5e-247 859.4 538 76.8
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 2.2e-246 855.5 546 77.8
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 3.7e-246 854.7 541 78.2
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 1.2e-244 849.7 555 75.5
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 4.5e-244 847.8 539 77.2
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 5.9e-244 847.4 522 77.4
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 5.9e-244 847.4 538 78.6
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 8.5e-243 843.6 542 77.1
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 1.5e-242 842.8 535 77.8
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 7.2e-242 840.5 534 78.3
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 1.0e-240 836.6 486 82.5
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 3.0e-240 835.1 521 76.0
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 3.0e-240 835.1 521 76.0
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 6.7e-240 833.9 538 75.3
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 1.5e-239 832.8 538 75.3
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 1.3e-238 829.7 529 75.2
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 2.2e-238 828.9 521 75.8
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.2e-238 828.9 534 75.8
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 6.3e-238 827.4 534 76.0
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 4.5e-236 821.2 532 74.6
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 1.9e-234 815.8 482 79.9
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 3.6e-233 811.6 533 74.9
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 6.8e-232 807.4 540 72.8
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 5.7e-231 804.3 547 73.5
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 4.1e-229 798.1 559 71.2
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 1.2e-228 796.6 544 72.4
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 4.5e-228 794.7 559 71.0
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 7.7e-228 793.9 544 72.4
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 9.4e-226 786.9 535 73.1
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 1.0e-224 783.5 563 69.3
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 3.3e-218 761.9 533 70.2
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 1.0e-216 756.9 535 69.5
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.0e-216 756.9 476 75.4
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 3.4e-215 751.9 398 87.4
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 3.9e-211 738.4 426 80.8
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 2.9e-206 722.2 529 68.8
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 3.7e-206 721.8 537 66.9
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 3.6e-201 705.3 471 73.5
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 1.2e-193 680.2 442 76.0
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 9.2e-189 664.1 402 80.8
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 3.3e-186 655.6 512 66.2
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 1.5e-183 646.7 331 91.8
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 2.9e-182 642.5 401 75.6
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 1.3e-153 547.4 539 53.1
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 3.1e-152 542.7 501 54.5
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 4.1e-152 542.3 285 88.1
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.1e-149 534.3 396 68.7
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 1.4e-149 533.9 410 66.8
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 5.9e-135 485.3 346 69.4
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 3.9e-131 472.6 347 65.7
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 4.4e-130 469.2 451 53.9
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 6.3e-129 465.3 451 52.1
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 6.8e-115 418.7 320 65.9
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 1.5e-106 391.0 274 73.0
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 4.4e-90 336.3 182 83.5
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 2.0e-87 327.4 231 73.2
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 4.6e-87 326.2 181 85.1
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 2.6e-74 283.9 228 63.2
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 4.6e-55 219.9 135 73.3
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 4.8e-44 183.3 116 75.9
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 6.9e-43 179.5 102 79.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 2.0e-34 151.4 81 88.9
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 4.8e-28 130.2 68 88.2
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 2.6e-21 107.8 57 86.0
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 9.7e-21 105.9 59 81.4
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 9.7e-21 105.9 59 81.4
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 1.5e-18 98.6 53 84.9
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 5.0e-17 93.6 50 82.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 8.2e-12 76.3 65 60.0
CBR_g21303 Chara braunii HOM05D001677 ORTHO05D000002 6.7e-06 56.6 183 28.4


User provided reference genes

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