Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01520 Erythranthe guttata HOM05D005140 ORTHO05D006288 2.5e-279 964.9 539 100.0
MSTRG.13768 Avicennia marina HOM05D005140 ORTHO05D006288 1.2e-225 786.6 449 83.5
Gorai.004G191200 Gossypium raimondii HOM05D005140 ORTHO05D006288 6.6e-219 764.2 452 81.4
Peaxi162Scf00301g01111 Petunia axillaris HOM05D005140 ORTHO05D006288 1.1e-218 763.5 423 84.6
SGA_v2.0_scaffold20G09272 Striga asiatica HOM05D005140 ORTHO05D006288 1.9e-218 762.7 439 83.8
Lalb_Chr09g0324091 Lupinus albus HOM05D005140 ORTHO05D006288 2.1e-217 759.2 437 81.7
CAN.G572.25 Capsicum annuum HOM05D005140 ORTHO05D006288 3.6e-217 758.4 416 84.4
Cc08_g11170 Coffea canephora HOM05D005140 ORTHO05D006288 3.6e-217 758.4 442 82.6
Gohir.D08G182300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 6.2e-217 757.7 452 81.0
Solyc08g077750.4 Solanum lycopersicum HOM05D005140 ORTHO05D006288 6.2e-217 757.7 415 83.9
Sopen08g026270 Solanum pennellii HOM05D005140 ORTHO05D006288 8.1e-217 757.3 415 83.6
Thecc.03G238100 Theobroma cacao HOM05D005140 ORTHO05D006288 2.3e-216 755.7 442 82.6
Glyma.01G204000 Glycine max HOM05D005140 ORTHO05D006288 7.5e-215 750.7 413 84.7
Rhsim07G0119600 Rhododendron simsii HOM05D005140 ORTHO05D006288 3.7e-214 748.4 422 83.4
TAR636G3078 Trochodendron aralioides HOM05D005140 ORTHO05D006288 6.4e-214 747.7 427 82.2
Manes.01G182900 Manihot esculenta HOM05D005140 ORTHO05D006288 3.2e-213 745.3 416 84.1
Glyma.11G039000 Glycine max HOM05D005140 ORTHO05D006288 1.6e-212 743.0 416 83.4
Nn6g33739 Nelumbo nucifera HOM05D005140 ORTHO05D006288 1.0e-211 740.3 430 80.9
Prupe.5G053400 Prunus persica HOM05D005140 ORTHO05D006288 1.0e-211 740.3 442 80.8
Dinv25152 Davidia involucrata HOM05D005140 ORTHO05D006288 1.3e-211 740.0 435 80.7
Phvul.002G002400 Phaseolus vulgaris HOM05D005140 ORTHO05D006288 1.7e-211 739.6 420 82.9
CiPaw.12G056200 Carya illinoinensis HOM05D005140 ORTHO05D006288 8.6e-211 737.3 421 82.9
PGR031G2829 Punica granatum HOM05D005140 ORTHO05D006288 1.1e-210 736.9 425 81.6
Atru.chr9.1157 Acer truncatum HOM05D005140 ORTHO05D006288 1.2e-209 733.4 433 79.9
unitig_699.g19774 Utricularia gibba HOM05D005140 ORTHO05D006288 1.2e-209 733.4 448 78.6
Lsat_1_v5_gn_6_94760 Lactuca sativa HOM05D005140 ORTHO05D006288 2.8e-209 732.3 442 81.0
COL.COLO4_06693 Corchorus olitorius HOM05D005140 ORTHO05D006288 3.6e-209 731.9 447 80.3
Potri.001G149900 Populus trichocarpa HOM05D005140 ORTHO05D006288 3.6e-209 731.9 417 82.0
Hund14471 Selenicereus undatus HOM05D005140 ORTHO05D006288 3.6e-209 731.9 430 80.7
Ca_24617_v3 Cicer arietinum L. HOM05D005140 ORTHO05D006288 2.4e-208 729.2 434 79.7
Gohir.A08G162300 Gossypium hirsutum HOM05D005140 ORTHO05D006288 4.0e-208 728.4 452 79.0
vmacro23518 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 6.8e-208 727.6 420 82.1
Sed0013740 Sechium edule HOM05D005140 ORTHO05D006288 2.0e-207 726.1 431 80.5
DCAR_008319 Daucus carota HOM05D005140 ORTHO05D006288 2.6e-207 725.7 421 81.2
Psat2g175480 Pisum sativum HOM05D005140 ORTHO05D006288 2.6e-207 725.7 433 80.4
RcHm_v2.0_Chr7g0206411 Rosa chinensis HOM05D005140 ORTHO05D006288 7.6e-207 724.2 426 81.7
Sed0020438 Sechium edule HOM05D005140 ORTHO05D006288 1.3e-206 723.4 423 81.8
ClCG09G012630 Citrullus lanatus HOM05D005140 ORTHO05D006288 4.9e-206 721.5 442 79.0
TWI60G0080 Tripterygium wilfordii HOM05D005140 ORTHO05D006288 6.4e-206 721.1 436 78.0
arahy.Tifrunner.gnm1.ann1.FH98R9 Arachis hypogaea HOM05D005140 ORTHO05D006288 1.1e-205 720.3 455 76.5
arahy.Tifrunner.gnm1.ann1.W7TPG2 Arachis hypogaea HOM05D005140 ORTHO05D006288 1.1e-205 720.3 455 76.5
QL12p008469 Quercus lobata HOM05D005140 ORTHO05D006288 1.4e-205 719.9 438 79.5
MELO3C003340.2 Cucumis melo HOM05D005140 ORTHO05D006288 2.4e-205 719.2 441 79.4
Haze_08349 Corylus avellana HOM05D005140 ORTHO05D006288 3.2e-205 718.8 426 80.8
Eucgr.D02138 Eucalyptus grandis HOM05D005140 ORTHO05D006288 3.2e-205 718.8 462 75.5
CsaV3_3G049760 Cucumis sativus L. HOM05D005140 ORTHO05D006288 7.1e-205 717.6 443 78.8
FvH4_5g20680 Fragaria vesca HOM05D005140 ORTHO05D006288 1.2e-204 716.8 433 80.4
Duzib068G0986 Durio zibethinus HOM05D005140 ORTHO05D006288 1.6e-204 716.5 391 85.9
FAN04G2093 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.1e-204 716.1 433 80.4
CANSAT21G2106 Cannabis sativa HOM05D005140 ORTHO05D006288 4.6e-204 714.9 450 77.3
Lj2g0026795 Lotus japonicus HOM05D005140 ORTHO05D006288 7.8e-204 714.1 420 80.0
Ah.12g053860 Amaranthus hybridus HOM05D005140 ORTHO05D006288 3.9e-203 711.8 416 81.5
FAN08G1378 Fragaria x ananassa HOM05D005140 ORTHO05D006288 5.1e-203 711.4 424 81.4
FAN13G1317 Fragaria x ananassa HOM05D005140 ORTHO05D006288 6.6e-203 711.1 433 80.4
Sabra01G0119900 Salix brachista HOM05D005140 ORTHO05D006288 3.3e-202 708.8 483 72.5
Actinidia31490 Actinidia chinensis HOM05D005140 ORTHO05D006288 2.8e-201 705.7 478 72.8
Nitab4.5_0012059g0010 Nicotiana tabacum HOM05D005140 ORTHO05D006288 1.5e-199 699.9 447 75.8
Dinv28888 Davidia involucrata HOM05D005140 ORTHO05D006288 4.4e-199 698.4 410 80.7
Medtr5g013580 Medicago truncatula HOM05D005140 ORTHO05D006288 3.2e-197 692.2 426 77.5
Nitab4.5_0004689g0020 Nicotiana tabacum HOM05D005140 ORTHO05D006288 4.2e-197 691.8 432 76.4
EL10Ac5g12239 Beta vulgaris HOM05D005140 ORTHO05D006288 1.6e-196 689.9 471 72.6
Nn1g00730 Nelumbo nucifera HOM05D005140 ORTHO05D006288 6.0e-196 688.0 417 77.7
Aqoxy3G02576 Aquilegia oxysepala HOM05D005140 ORTHO05D006288 2.3e-195 686.0 435 75.4
TPR.G22969 Trifolium pratense HOM05D005140 ORTHO05D006288 2.3e-195 686.0 427 77.8
MD00G1132300 Malus domestica HOM05D005140 ORTHO05D006288 1.9e-194 682.9 450 75.8
vmacro14121 Vaccinium macrocarpon HOM05D005140 ORTHO05D006288 3.3e-194 682.2 420 78.3
PSO063G3549 Papaver somniferum HOM05D005140 ORTHO05D006288 6.2e-193 677.9 427 77.3
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 1.1e-192 677.2 443 74.9
PSO782G2508 Papaver somniferum HOM05D005140 ORTHO05D006288 1.1e-192 677.2 427 77.3
MD06G1045500 Malus domestica HOM05D005140 ORTHO05D006288 2.4e-192 676.0 461 73.3
Carub.0007s2375 Capsella rubella HOM05D005140 ORTHO05D006288 1.2e-188 663.7 452 71.5
Ciclev10019303m.g Citrus clementina HOM05D005140 ORTHO05D006288 3.5e-188 662.1 385 80.8
THA.LOC104798349 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 7.9e-188 661.0 439 72.7
GSVIVG01013286001 Vitis vinifera HOM05D005140 ORTHO05D006288 7.4e-186 654.4 350 87.1
HanXRQChr03g0089631 Helianthus annuus HOM05D005140 ORTHO05D006288 2.0e-183 646.4 425 75.1
BcaNung03452 Brassica carinata HOM05D005140 ORTHO05D006288 3.4e-183 645.6 417 73.9
AT4G17620 Arabidopsis thaliana HOM05D005140 ORTHO05D006288 1.7e-182 643.3 453 69.1
Sp7g16510 Schrenkiella parvula HOM05D005140 ORTHO05D006288 2.2e-182 642.9 455 68.4
BcaNung00074 Brassica carinata HOM05D005140 ORTHO05D006288 2.9e-182 642.5 451 69.6
A03p50570 Brassica napus HOM05D005140 ORTHO05D006288 4.9e-182 641.7 452 69.7
BcaC06g33554 Brassica carinata HOM05D005140 ORTHO05D006288 6.4e-182 641.3 419 72.8
CARHR224350 Cardamine hirsuta HOM05D005140 ORTHO05D006288 8.4e-182 641.0 446 69.5
C01p11300 Brassica napus HOM05D005140 ORTHO05D006288 1.1e-181 640.6 447 69.8
BraA03t14147Z Brassica rapa HOM05D005140 ORTHO05D006288 1.3e-179 633.6 421 72.0
HPP92_020526 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.3e-179 632.9 416 73.6
BolC7t45397H Brassica oleracea HOM05D005140 ORTHO05D006288 5.1e-179 631.7 433 70.4
SGA_v2.0_scaffold6G03141 Striga asiatica HOM05D005140 ORTHO05D006288 6.7e-179 631.3 386 78.8
Thhalv10024864m.g Eutrema salsugineum HOM05D005140 ORTHO05D006288 1.9e-178 629.8 449 69.0
C07p48890 Brassica napus HOM05D005140 ORTHO05D006288 3.3e-178 629.0 433 70.2
ATR0665G273 Amborella trichopoda HOM05D005140 ORTHO05D006288 4.8e-177 625.2 435 69.4
Aa31LG6G380 Aethionema arabicum HOM05D005140 ORTHO05D006288 4.0e-176 622.1 438 68.3
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 6.9e-176 621.3 401 74.6
A01p09690 Brassica napus HOM05D005140 ORTHO05D006288 3.4e-175 619.0 450 68.4
AUR62007191 Chenopodium quinoa HOM05D005140 ORTHO05D006288 5.8e-175 618.2 377 77.5
FAN18G3556 Fragaria x ananassa HOM05D005140 ORTHO05D006288 2.2e-174 616.3 395 77.2
BcaC09g51625 Brassica carinata HOM05D005140 ORTHO05D006288 7.1e-173 611.3 424 70.0
BraA01t00912Z Brassica rapa HOM05D005140 ORTHO05D006288 1.6e-172 610.1 462 66.5
HPP92_022002 Vanilla planifolia HOM05D005140 ORTHO05D006288 2.3e-171 606.3 424 68.9
Aa31LG9G15140 Aethionema arabicum HOM05D005140 ORTHO05D006288 1.1e-170 604.0 417 69.1
Lj9A525T29 Lonicera japonica HOM05D005140 ORTHO05D006288 1.5e-170 603.6 385 77.7
HPP92_028085 Vanilla planifolia HOM05D005140 ORTHO05D006288 1.5e-170 603.6 416 71.9
BcaNung06713 Brassica carinata HOM05D005140 ORTHO05D006288 9.7e-170 600.9 390 72.8
THA.LOC104814458 Tarenaya hassleriana HOM05D005140 ORTHO05D006288 6.5e-166 588.2 453 65.1
CDE04G2928 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 5.5e-165 585.1 394 72.3
Lj2C253G13 Lonicera japonica HOM05D005140 ORTHO05D006288 5.1e-163 578.6 461 65.5
VMungo0239G0001 Vigna mungo HOM05D005140 ORTHO05D006288 1.4e-160 570.5 315 83.8
AUR62018812 Chenopodium quinoa HOM05D005140 ORTHO05D006288 6.1e-156 555.1 305 82.6
MBI04_g46822_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 5.3e-152 542.0 354 73.4
Sc01g0007900 Simmondsia chinensis HOM05D005140 ORTHO05D006288 1.2e-151 540.8 321 79.1
Os05g0392100 Oryza sativa ssp. japonica HOM05D005140 ORTHO05D006288 2.3e-139 500.0 334 71.6
Zm00001eb287280 Zea mays HOM05D005140 ORTHO05D006288 3.6e-132 476.1 293 76.5
Hma1.2p1_1672F.1_g296780 Hydrangea macrophylla HOM05D005140 ORTHO05D006288 1.4e-128 464.2 310 72.9
AagrBONN_evm.TU.Sc2ySwM_344.2637 Anthoceros agrestis HOM05D005140 ORTHO05D006288 4.5e-127 459.1 401 56.6
GSVIVG01013283001 Vitis vinifera HOM05D005140 ORTHO05D006288 9.5e-125 451.4 441 56.9
Pp3c10_5020 Physcomitrium patens HOM05D005140 ORTHO05D006288 2.9e-118 429.9 474 49.2
SHI07711 Sapria himalayana HOM05D005140 ORTHO05D006288 2.0e-114 417.2 360 61.4
Mapoly0062s0029 Marchantia polymorpha HOM05D005140 ORTHO05D006288 2.6e-114 416.8 362 56.6
CDE12G0612 Ceratophyllum demersum HOM05D005140 ORTHO05D006288 3.7e-113 412.9 322 63.0
BolC1t01096H Brassica oleracea HOM05D005140 ORTHO05D006288 5.8e-106 389.0 218 80.3
SMO259G0041 Selaginella moellendorffii HOM05D005140 ORTHO05D006288 1.9e-104 384.0 325 53.5
Oeu017029.1 Olea europaea HOM05D005140 ORTHO05D006288 2.1e-103 380.6 191 91.6
CBR_g48842 Chara braunii HOM05D005140 ORTHO05D006288 7.3e-93 345.5 434 46.5
Peaxi162Scf00715g00010 Petunia axillaris HOM05D005140 ORTHO05D006288 1.8e-91 340.9 230 73.5
Cpa.g.sc98.58 Carica papaya HOM05D005140 ORTHO05D006288 1.6e-84 317.8 259 62.2
Oeu062963.3 Olea europaea HOM05D005140 ORTHO05D006288 4.3e-69 266.5 258 57.4
QL12p008508 Quercus lobata HOM05D005140 ORTHO05D006288 5.1e-54 216.5 172 68.6
Psat1g146680 Pisum sativum HOM05D005140 ORTHO05D006288 4.5e-50 203.4 114 83.3
Oeu017031.1 Olea europaea HOM05D005140 ORTHO05D006288 7.2e-48 196.1 136 72.8
Thecc.03G238400 Theobroma cacao HOM05D005140 ORTHO05D006288 8.2e-44 182.6 140 67.9
MCO13G373 Micromonas commoda HOM05D005140 ORTHO05D006288 7.0e-35 152.9 318 33.6
Cpa.g.c32337.2 Carica papaya HOM05D005140 ORTHO05D006288 1.4e-30 138.7 106 70.8
SEGI_19334 Sequoiadendron giganteum HOM05D005140 ORTHO05D000001 1.7e-28 131.7 77 76.6
Cre07.g338400 Chlamydomonas reinhardtii HOM05D005140 ORTHO05D006288 2.8e-28 131.0 272 33.1
MD10G1199900 Malus domestica HOM05D005140 ORTHO05D006288 8.2e-28 129.4 79 79.7
GSVIVG01001794001 Vitis vinifera HOM05D005140 ORTHO05D006288 3.4e-21 107.5 80 63.8
Cfa024662 Carpinus fangiana HOM05D005140 ORTHO05D006288 2.9e-17 94.4 210 30.5
DCAR_016064 Daucus carota HOM05D005140 ORTHO05D006288 6.1e-15 86.7 52 73.1
ECA233G4689 Erigeron canadensis HOM05D005140 ORTHO05D006288 2.9e-09 67.8 82 51.2
Gohir.A08G083762 Gossypium hirsutum HOM05D005140 ORTHO05D006288 2.9e-09 67.8 29 93.1
Psat6g107920 Pisum sativum HOM05D032184 ORTHO05D330502 2.1e-07 61.6 28 92.9
BolC1t01095H Brassica oleracea HOM05D005140 ORTHO05D006288 8.9e-06 56.2 74 50.0


User provided reference genes

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