Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 1.6e-276 955.7 571 100.0
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 2.0e-149 533.5 546 66.3
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 7.6e-141 505.0 582 57.9
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 1.7e-140 503.8 569 56.4
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 3.2e-139 499.6 471 68.8
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 1.6e-138 497.3 582 53.4
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 1.0e-137 494.6 527 62.2
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 1.8e-137 493.8 471 69.4
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 5.1e-137 492.3 527 62.0
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 2.5e-136 490.0 531 62.5
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 8.2e-135 485.0 570 58.9
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 9.0e-134 481.5 575 60.2
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 4.2e-131 472.6 455 71.2
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 4.2e-131 472.6 585 59.0
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 1.1e-128 464.5 480 61.5
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 9.1e-126 454.9 524 57.6
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.2e-123 446.4 544 54.6
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 3.6e-122 443.0 538 55.4
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.4e-121 441.0 570 53.5
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 4.4e-120 436.0 538 58.4
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 4.1e-118 429.5 471 63.7
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.7e-116 424.1 537 57.0
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 2.0e-112 410.6 538 56.1
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 7.5e-112 408.7 466 57.1
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 2.0e-109 400.6 538 56.1
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 7.7e-109 398.7 471 61.4
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 7.7e-109 398.7 544 53.1
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 8.5e-108 395.2 582 53.3
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 2.1e-106 390.6 471 61.4
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 3.6e-106 389.8 582 52.7
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 3.6e-106 389.8 515 55.5
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 6.1e-106 389.0 649 40.8
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 1.4e-105 387.9 539 54.9
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 1.5e-104 384.4 536 55.8
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 7.5e-104 382.1 563 50.6
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 7.5e-104 382.1 583 47.2
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 2.8e-103 380.2 542 50.6
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 3.7e-103 379.8 475 59.6
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 3.7e-103 379.8 584 53.1
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 7.0e-102 375.6 577 53.2
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 7.0e-102 375.6 531 49.9
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 4.2e-99 366.3 584 46.4
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 3.6e-98 363.2 522 53.1
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 8.0e-98 362.1 571 52.0
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 1.0e-97 361.7 517 54.9
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 1.4e-97 361.3 623 48.2
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 4.0e-97 359.8 519 52.0
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 5.2e-97 359.4 449 56.6
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 1.5e-96 357.8 470 58.3
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 2.0e-96 357.5 530 47.4
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 7.5e-96 355.5 575 45.4
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 9.8e-96 355.1 541 49.7
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 2.8e-95 353.6 503 57.5
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 8.3e-95 352.1 533 50.1
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 8.3e-95 352.1 536 51.7
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 1.1e-94 351.7 470 56.6
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.1e-94 351.7 534 52.8
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.6e-93 347.8 491 56.6
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 2.7e-93 347.1 517 52.6
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 4.5e-93 346.3 476 54.6
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 2.9e-92 343.6 534 50.7
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 3.8e-92 343.2 564 52.1
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 3.8e-92 343.2 425 57.4
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.9e-91 340.9 457 47.3
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 4.3e-91 339.7 526 51.7
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 5.6e-91 339.3 536 50.7
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 9.5e-91 338.6 580 50.5
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 1.6e-90 337.8 581 46.8
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 1.6e-90 337.8 574 49.7
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 2.1e-90 337.4 475 55.2
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.4e-89 334.7 584 40.9
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 3.0e-89 333.6 451 50.1
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 5.2e-89 332.8 529 50.5
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 6.8e-89 332.4 536 51.5
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 6.8e-89 332.4 506 54.0
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 2.2e-87 327.4 530 49.4
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 2.9e-87 327.0 525 50.9
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 3.7e-87 326.6 475 53.1
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 8.3e-87 325.5 533 50.5
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 7.8e-85 318.9 546 44.0
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 1.0e-84 318.5 545 49.5
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 1.3e-84 318.2 516 50.2
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 2.5e-83 313.9 433 53.6
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 3.3e-83 313.5 525 49.5
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 4.3e-83 313.2 541 48.4
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 7.3e-83 312.4 521 49.7
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 2.8e-82 310.5 518 49.6
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 1.8e-81 307.8 465 52.7
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 3.1e-81 307.0 538 39.2
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 3.1e-81 307.0 523 50.1
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 4.0e-81 306.6 519 49.5
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 5.2e-81 306.2 482 41.7
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 4.4e-80 303.1 465 52.3
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 5.8e-80 302.8 523 48.2
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 2.9e-79 300.4 513 49.5
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 1.1e-78 298.5 218 71.6
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 2.0e-77 294.3 513 49.1
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 2.5e-75 287.3 572 46.0
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 1.5e-72 278.1 518 44.2
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 5.8e-72 276.2 540 46.1
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 4.1e-70 270.0 211 68.7
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 4.0e-65 253.4 300 63.7
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 1.6e-58 231.5 327 58.4
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 2.6e-56 224.2 450 44.0
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 5.8e-56 223.0 402 46.0
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.1e-45 188.0 461 33.8
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 2.3e-44 184.5 341 49.9
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 4.3e-43 180.3 202 49.0
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 3.9e-36 157.1 115 69.6
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.7e-34 150.6 148 53.4
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 2.4e-33 147.9 203 60.6
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 2.5e-30 137.9 129 55.0
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.0e-28 131.0 96 65.6
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 5.1e-28 130.2 82 81.7
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 9.6e-27 125.9 338 27.2
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 8.2e-26 122.9 154 47.4
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 5.3e-25 120.2 159 43.4
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 1.2e-24 119.0 119 63.0
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.6e-21 108.6 85 63.5
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.1e-21 108.2 118 55.9
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 1.3e-20 105.5 84 64.3
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 7.4e-19 99.8 386 25.1
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.2e-18 98.2 317 42.0
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 1.7e-15 88.6 394 38.1
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 5.5e-14 83.6 60 66.7
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 7.2e-14 83.2 159 39.0
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 8.8e-12 76.3 62 61.3
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.5e-11 75.5 141 34.8
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 9.7e-11 72.8 53 67.9
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 3.7e-10 70.9 144 31.2
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 8.2e-10 69.7 66 51.5
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 2.2e-07 61.6 73 47.9


User provided reference genes

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